Dkik008855.1
Basic Information
- Insect
- Drosophila kikkawai
- Gene Symbol
- DMRT2
- Assembly
- GCA_018152535.1
- Location
- NW:5884749-5887911[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.6 5.7e+03 -3.0 0.5 28 38 59 70 58 76 0.70 2 3 3.7e-24 1.3e-20 72.7 16.3 1 47 104 150 104 150 0.99 3 3 1.4 5.1e+03 -2.8 0.1 39 46 207 214 204 215 0.82
Sequence Information
- Coding Sequence
- ATGCACATTGACAAAATACAGAGTCCAAacagagagagggagatgGAGAGATCCAGCCAGCGATTAGCAGCCAATGGCAGGCGAGGATCCGGCCTCCTCCGGTCGCTGCGGCCGCCGTCCGGGTCTAACCACTTGACGCTGCCAGGCTGTCTGGTCGGTTCGTCGGCGACAAGTAGCTGCGGTTGCCTCAGCCAGTGCTTAAATGTGCGCGTCGCTACCCGAATCCTTTCAGTCGATCAGCAACAAGCCGCCAGGATGAGCAAGGATCACCAGGATAGAATCATCAGCCCCCGGGAGCGACGTCTGCTGCGTACGCCGAAGTGCGCCCGTTGCCGCAACCATGGTGTCATCTCCTGCGTCAAGGGCCACAAGCGGCTGTGCCGGTGGCGCGAGTGCTGCTGCCCCAACTGCCAGCTGGTGGTGGACCGTCAACGGGTAATGGCCGCCCAGGTGGCCCTGCGACGCCAGCAAACCATGGAGGCTTTGGAGGTCAACACCACCACGACAGCAACAGCCTCCAGCGAGGGTGAGGATTCGCTTACCTCCACATCACCCCCGCCATTGGGATTTAGGAACTCCAGCGCAACATCTgccacatcatcatcatcgtcatccgCCACGCGACAGGCCTTGATGGCCCAGAAAAGGATCTACAAGCAGCGGCTGCGCAGCCTGCAGCAGTCCACGTTACACATTACCGCTGCCATGGAAGAGTACAAGCAGCGCTTTCCCACGTTCACATCGCCGCTGATGGAGCGCATGCGCAAGCGGCGGGCGTTCGCCGATCCGGAACTGAACCATGTCATGGAGGCGACACTGGGCGGGAACGCTTTGTACTTTGCCACCGTTGCCGCGGCtgtgcagcaggagcagcaacaccaccaccaccacaactTGTATCAATcaatgccgccgccgcctgtgaACACACTGGTGGACACGCCCAGGACACGCCTGACGCAGCactccagctccagcaccgTCAAGAAGCCCAAGCTTAGCTTCTCCATTGAGGCCATCATGGGCCTCAGCACGTAG
- Protein Sequence
- MHIDKIQSPNREREMERSSQRLAANGRRGSGLLRSLRPPSGSNHLTLPGCLVGSSATSSCGCLSQCLNVRVATRILSVDQQQAARMSKDHQDRIISPRERRLLRTPKCARCRNHGVISCVKGHKRLCRWRECCCPNCQLVVDRQRVMAAQVALRRQQTMEALEVNTTTTATASSEGEDSLTSTSPPPLGFRNSSATSATSSSSSSATRQALMAQKRIYKQRLRSLQQSTLHITAAMEEYKQRFPTFTSPLMERMRKRRAFADPELNHVMEATLGGNALYFATVAAAVQQEQQHHHHHNLYQSMPPPPVNTLVDTPRTRLTQHSSSSTVKKPKLSFSIEAIMGLST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00525897; iTF_00569704; iTF_00489392; iTF_00533119; iTF_00478035; iTF_00561780;
- 90% Identity
- -
- 80% Identity
- -