Basic Information

Insect: Drosophila kikkawai
Gene Symbol: -
Assembly: GCA_018152535.1
Location: NW:15868208-15875104[+]

Transcription Factor Domain

TF Family: MBD
Domain: MBD domain
PFAM: PF01429
TF Group: Unclassified Structure
Description: The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 7.7e-14 2.2e-10 39.7 0.0 7 72 577 638 571 642 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	7.7e-14	2.2e-10	39.7	0.0	7	72	577	638	571	642	0.87

Sequence Information

Coding Sequence: ATGAGTGCACCCGACGACATACCGTCGATGTCACCTGCAAGAAAGCGTGAAAAGTCCAGCTCCGGGAGTGAGTCCATGTCGCAGCCCTCGACCACGCCTCCTGTCGAACGTCCTTCTACCAGCAATGGACACGAAAGTGGCCACTTTCTTGGaggacacggacacggacactCGCAACACCACTCGTCTGGCCAACTGGGCAACCACCACCACATGCGCCGTCCCAGCGCCGGGCACAGTTCCACAGACAGTCGCAGCAGCTCCCACGGTGATGGTGTGCGGCGACTCTCCAGCATGCGCGATCGCGTCCTAGTGTCCAATGCTAATGCCATGGCCCGGGGAATGTCCCTCAGCGAGCTAGAggacacaacaacaacaaccacaaccagctcctcctcgtcgccgCATATGAATGGGCATAATCACAGCAACACAGATAATGATCAGCAGCAGGCTGGCACTTCCAATGGATCTcgcaagaagaagaaaaagaagagaCACTGGCATCGTAGCTCATATGACAGCGATCTCATTGGCTGGACTGGGCTCTACCCCAACCTGTCCAAAACCACAGACAAAGTTTTGGATAGCAATCCCGAGCTGGATGCGCAGACGTCCGACGAGCTGCTGGCCCTAAGCAGACGTGGTCTAATGGTGTATCCTAGAGAGGCACAGGGATCGGaggcagcagtagcagccgcagcagcagagccGACTCGAAATCctcagccgcagcagcagcagccgcagtcGCTAGCAACGTCTCCATCGCCGATCGAGTCCTCTCTGTCTCCCAACTCTGAACTGAATAGGAATCTGACACCAGGACCAGAAACAGGACTAGTACCTGAACATGAACCACCACCAACCACAACTAGTACAAATCTAACAACGACAACAGCTAGTAACAGTTCCAACTGGGACGCAGCAGCCACTTTCCGTGAGAAGAGCGTTGAAGATGATTCCAAGGAGCCACAGCCACAGGTTGCTGCTGATTCCAGTACCTCGAGCCTCGGTGGCAAGCGTCAAGGCATGCCACTAGAAAACCAGGTCAAGCAGGAGGAAGAGGACGAGCATCCTAATGAGAAAACTACGGCTAAAGAGAAGGATCAACTGGCGCCGCCATTGTCCAAGCGCCAGAAGAATGAGCCACCTGTTCGTTCCTTGTCTCGTTCCATGTCCCTGGATATTCAAGATACGCTACCTAAGCACGAGCAGGCGACGACCAGCCGCTCTAAGAGCCAGGATTCGTTGATTGATGACAACCTGGGGTCACCAAAAACTTTGGCCAAGAAAGAGGAGCGGAGCCAAGAGGAGGAGACCAATTCGCAGCCGCCTCTAAGCGTAACCAAGTCCGAGACGCCTTCTCCTAATGCAGTGGAACCCGAGGTGGTTTATCCAAAGGTAGCAGAGCCTGAGGTGCCATCTCCGAGCGTAGCGGAGCCTCTTCCTCAAGGCATAGAGGAGACTCCTCCTCCAGGCGTAGCAGAAGAGCCTGCTCTTGCAGGCATAGCTGAGACTCACCCTCTGGACGTAGCAGAGCCTGCTCCTCCAGGCGAAGCGGAGCCTTCACCTCTAAGCGTAGCAGAGCCGCCTCTGCTAAGCGTAGCGGAGACTCCCCCTCTAGGCCTGGATGAGCCTCCTCCAAGCGAAATAAAGATGAAATTGctgcccaacaacaacaacaccatgATGACTACAGTGAAGCTAAAGGCCACCGATGAGTTTTATCGGCTGCCCTTCTCCTATGGCTGGCGTCGCGAACTCGTCTTGCCCAGCCTGGGCAATCCCAAGCGTCGCACCGGCGACGTCTTTTTCATCTCACCCAGTGGTCGGAAACTGCGTTCCCGCGAGGATATTATACCCCTGCTGGAGGGCGATCTGACCATACAACATTTCTGCTTCCAACGTGCATCGCAGGAGGTGGGTCCCCAGTATGAGGTAGTGCGGCGCGCTACGCCTGCCTTGTACCGGTCCAAGCAGAACGAGGCGTCGCAGGAGCAGGATCTGGCTGTGACCGGAAAGCGTGTGCCCAAGCCCAAGGTACCAAAGGGTGCCAGTCCACCCAGCGAGGGATGGACTTCCACGGCGGCGGTGAAGGGTAAAGTGCGTAGTACATTGTCAAGCAATGGTGGGAATCTGGCAGTTGCCGTCTCGCGCAAGCAAAGCAAGGTTTACAAGGTGTCGAGCAGCGAGAAGGAACGTGAGTCTGAGAtcgagcagcaacagcagcaacctgTGGCTCTGCCAGTGGATGTTTTTGAGGTTTCTGACGACACCGAGGAGGATAATGATGATACCCCCAGTAGCAGTGGCAGCGCCATGGAAATAGCCGAGGAAATAGAGCTGCCGGGCCAAATGCCACCATCTCACCTCTttgagcaggagcaggagcaggagtatCGCCCTTTGAGGGATATGGATGTGGTGGTAATTGGTGGACGCAAGGCTATTTTTGTACGTGGTCCACCGCAGCCGCCACTTGTGAAACTGGTGCCACGCCTGCCAGACCTGACCAGCTACGATCGGATTTACAGGAAGCGCATCCAGGACAAGAGAATGGGCCAGACGCTGGCCATAAGCCTCAACGATGCCCACATAGGGGTCAATGTGCTGGCTGCTGTAATGAAAACCCTAAACATGAAGGAACGTGTAACCATATCGCAGGTGTGCACCACCTGGGCCATGGTTAGTCGCGATAATCGCGTCTGGAACAAGGTCATATTGCGGGATACGTATGTCGGCAATTGGATTAAATTGCTTACGGAAATGGCCCGCCATCGCACTCGCGAGCTGGACATGATGGGCGTGATTATGACCACGCCAAAGCTGCGTTTTACAGGTGAATTGCGCATAGTGAAGTCATTGCGTTCACTGCGCACCGATGCCACCACCAATGAGTTCCTAAAGCTGGTCCTAACCAGCCTGCCGCAGCTGCAAGAGCTGCGAACGACCTGTGTGAGCTCCCACCTGCATTTGGGCCGGCTAGAGAGGATGCGGAAATTGCGTGTGCTCCGTATTAATATGACGCATCCAAAGGCTCAAGCCCTTCACATTAACGCCGTGCAGAACTTGAGCCACCTCACCGAACTGAGCATCCGTGGTGTGGCCAATTTGCAACAGTTGGACCTCATGCAACTGAAGCTGCTGACCCGCCTGCAGGTTCTGGGATTGGGCTCCTGTGAGTACCTAAACCATGAGCAGCTCGGACGCGAGGTGCTGCCCTGCCTGAAGGCCCTGCACACGGTACGCATTGAGAACGATCATCGGGCCATGGCCATGTTTCCGGTGGATGAGATTTTGCGTGGTTTGTCCCTAGCTGGCGGCGTGCAACGCCTCGAGCTGATCAACGTGGATGTGGATAGTGGATTTGGCCAACTCCTAGCCAGCTGCGGAACTGTAACGCATCTACTGCTGGCGCCCAAGTGCCTGCACAATACGGCGACCATGACCAATGCCGTGATGCAGGCCATCAGGGATAATGCGAATCACTTGGCGGTATTTCGTTTGGTCCTGGTTACCCAGCTGCTGAGTGCCACCGAGAATCTGTACAAGGGAACCCAGAAGAACGTGATACCAGTGCAGCGTCCTGTGCCGGGCATACCCTATGGCGATGCCCTCAATCACTGCTCGCCGGAGGATAATtgccaggaggaggagcacacCCAGTGCGTGGCCTTTCTGCCCGTCGAGCGTCTGGAGGCGATACTCAACGAAATGATGCCCATTGGGTATCTATCGGTGGCCAAGGTGGCCATGTCGGAGACCACAAATGTGCAGTTCCTCAAGCCCGGCGTCACCGAGAGCACCTAG
Protein Sequence: MSAPDDIPSMSPARKREKSSSGSESMSQPSTTPPVERPSTSNGHESGHFLGGHGHGHSQHHSSGQLGNHHHMRRPSAGHSSTDSRSSSHGDGVRRLSSMRDRVLVSNANAMARGMSLSELEDTTTTTTTSSSSSPHMNGHNHSNTDNDQQQAGTSNGSRKKKKKKRHWHRSSYDSDLIGWTGLYPNLSKTTDKVLDSNPELDAQTSDELLALSRRGLMVYPREAQGSEAAVAAAAAEPTRNPQPQQQQPQSLATSPSPIESSLSPNSELNRNLTPGPETGLVPEHEPPPTTTSTNLTTTTASNSSNWDAAATFREKSVEDDSKEPQPQVAADSSTSSLGGKRQGMPLENQVKQEEEDEHPNEKTTAKEKDQLAPPLSKRQKNEPPVRSLSRSMSLDIQDTLPKHEQATTSRSKSQDSLIDDNLGSPKTLAKKEERSQEEETNSQPPLSVTKSETPSPNAVEPEVVYPKVAEPEVPSPSVAEPLPQGIEETPPPGVAEEPALAGIAETHPLDVAEPAPPGEAEPSPLSVAEPPLLSVAETPPLGLDEPPPSEIKMKLLPNNNNTMMTTVKLKATDEFYRLPFSYGWRRELVLPSLGNPKRRTGDVFFISPSGRKLRSREDIIPLLEGDLTIQHFCFQRASQEVGPQYEVVRRATPALYRSKQNEASQEQDLAVTGKRVPKPKVPKGASPPSEGWTSTAAVKGKVRSTLSSNGGNLAVAVSRKQSKVYKVSSSEKERESEIEQQQQQPVALPVDVFEVSDDTEEDNDDTPSSSGSAMEIAEEIELPGQMPPSHLFEQEQEQEYRPLRDMDVVVIGGRKAIFVRGPPQPPLVKLVPRLPDLTSYDRIYRKRIQDKRMGQTLAISLNDAHIGVNVLAAVMKTLNMKERVTISQVCTTWAMVSRDNRVWNKVILRDTYVGNWIKLLTEMARHRTRELDMMGVIMTTPKLRFTGELRIVKSLRSLRTDATTNEFLKLVLTSLPQLQELRTTCVSSHLHLGRLERMRKLRVLRINMTHPKAQALHINAVQNLSHLTELSIRGVANLQQLDLMQLKLLTRLQVLGLGSCEYLNHEQLGREVLPCLKALHTVRIENDHRAMAMFPVDEILRGLSLAGGVQRLELINVDVDSGFGQLLASCGTVTHLLLAPKCLHNTATMTNAVMQAIRDNANHLAVFRLVLVTQLLSATENLYKGTQKNVIPVQRPVPGIPYGDALNHCSPEDNCQEEEHTQCVAFLPVERLEAILNEMMPIGYLSVAKVAMSETTNVQFLKPGVTEST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00489370;
90% Identity: iTF_00533097;
80% Identity: -