Dkan013684.1
Basic Information
- Insect
- Drosophila kanekoi
- Gene Symbol
- stc
- Assembly
- GCA_037075305.1
- Location
- JBAMCE010000577.1:10874380-10878316[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 1.4 1.3e+04 -3.6 0.5 15 18 346 349 345 350 0.79 2 16 2 1.8e+04 -4.1 1.6 15 19 373 377 372 377 0.81 3 16 0.056 5.2e+02 0.9 2.0 4 11 406 413 405 414 0.90 4 16 5.8e-07 0.0054 16.8 15.1 1 19 418 435 418 435 0.93 5 16 1.7 1.6e+04 -3.9 0.9 6 10 461 465 460 465 0.88 6 16 2.2e-08 0.00021 21.3 13.6 1 18 471 488 471 489 0.98 7 16 2 1.9e+04 -6.2 4.1 7 13 493 499 493 500 0.77 8 16 2e-09 1.8e-05 24.7 12.9 1 19 529 547 529 547 0.98 9 16 1.1 1e+04 -3.3 0.5 5 10 577 582 577 582 0.90 10 16 2.3e-05 0.22 11.7 17.0 4 19 595 610 588 610 0.88 11 16 0.057 5.3e+02 0.8 11.6 1 11 650 660 650 672 0.79 12 16 2.8e-10 2.6e-06 27.4 15.1 1 18 677 694 677 695 0.97 13 16 2 1.9e+04 -4.3 1.2 6 10 724 728 724 728 0.88 14 16 2 1.9e+04 -7.3 10.4 10 18 742 751 731 752 0.78 15 16 2e-07 0.0019 18.2 15.0 1 16 788 803 788 813 0.93 16 16 1.7e-06 0.016 15.3 13.7 1 19 820 839 820 839 0.96
Sequence Information
- Coding Sequence
- ATGGCCGAGtattggcagcaacagcaacagcagcagcagcagctgttaacGAACGGTGCTGACGCAGCGCCTGCTGCGGACGCCTCAAACACAGCGAatgggcacaacaacaacaataactatgtgaattttaatcaatttatcaCACAACACAACTTGGCCAGCTCCAGTCTGAACTACAacattggcggcggcggcggcgcctttGGCCtgacgcccagcagcagcgccgccagCAATTTTGGTGGCGGCGACAACTTGTACGCGACAACGTTTTATGCCTCTCAAAATGGCGATGGCGCCGCAAGTGGCAACAGTTATaatgcagccgcagccggTGCTTATCCCAATCTTTATACACCGTTTGGAAATAATCCGTTTGCTGCCACTGGCGTTGGCTACGATTTCAGCGCTTCCAAGCTGCAGGCCACAGCGCCCGAATTTGTGCCCAATTTTGCCAAGCTCAGTCTgacgtcggcggcggcggcgacgtcgCCGTCAGCGTCGGCGTCTAGCAAAaatcataacaacaacaacactgccACACAGCCAAAtggagcagcaggcagcaattcagcacagccacagccacaaagAGCCGACCAGAGGCAGCCGAAGCCGcatggcagcggcaacaatagTCGCCAGCAGCGACGCAACGACTACCGCGAGGATCGCAACGAGGACCGCTATGATCGCGGCAAGAAACCGCAGAAGCAACAGCGCTACGACAATCATCGCAGCAATAAGCGACGCGACGATTGGAATCGCAATCGGGATCGCATCAATGGCTATCCACGCGCCAACGAGGAGCTGgacacaagcaacagcaatgacAGCGCGCAGCCCTCGCCAGAGAAGCAGCCgtcgcaacagcaacacctgctgcaccagcagcaacaaatctCACCAAGACGCGCGCCCGATCATGAAAAGCTGTCGCAGCGGGAGAAGCTAATGCGCGACATTGAGCAGCGGCGTCTGGAGTGCCTGGTCTGTGTGGAGCAGATCAAGGCGCATCATGGCACCTGGTCGTGCCAGAATTGTTATCATGTGCTGCATCTGAAGTGCACCATCACCTGGGCCAGCAGCTCGAAATCCGCCGAGGGCTGGCGCTGTCCCGCCTGCCAGAATGTGCTGCAGGAGCTGCCGCGCGAATATCTGTGCTTTTGTGGCAAACTCAAGAATCCACCGTTGACGCGCACCGAACTAGCCCACAGCTGCGGTGAGCTGTGCTGCCGCGTCGAGGGCTGCAGCCATGCGTGCACGCTGCTCTGCCATCCCGGCCCGTGTCCGCCATGCCAGGCGAATGTCAgtcgcagctgcggctgcggacGCACCTCCAAGCTGATGCAGTGCGCCATgaagcagccgctgcagtGTGAGGCCATTTGCGACAAGCTGCTCAACTGCGGCGAGCATCGTTGCCAGCAGCCGTGCCATGCCGGCAAGTGTGAGGCGTGCGCggagcaagtgcagcagcattGCCATTGCGGCAAGCAGCAGCGCGAGGTGCAGTGCACCCGCGAGAGCCAGGATAAGCGCAGCTATTCGTGCAAAGAGTGCTGCAGCAAGCCGCTGCCCTGCGGCAATCATAAATGCAAGGATTCATGCCATGCCGGCGCCTGTCGTCCCTGCAAGCTGAGTCCCACACAAATCACCAGCTGCCCCTGCGGCAAGCTGCCGGTGCCGGCAacgcagcgcagcagctgtcTGGATCCTGTGCCCACCTGCGAGGGCGTCTGCGGCAAAACTCTGCGGTGCGGCAAACCCGCGCATCCTCATCAATGCGCCAGCAAATGCCACCTGGGCCAGTGCCCGCCCTGCCCCAAACAAACGGCGGTCAAGTGCCGTTGCGGACACATGGATCAGATGATCAAGTGCCGCCAGTTATCTACCCGTGCGGACGATGCGCGCTGCAAGCGACGCTGCACCAAGAAGCGCAGCTGTGGCAAGCACAAGTGCAATGCCGAGTGCTGCATTGATATCGATCACGCCTGTCCGTTGCCCTGCAATCGCACGCTCAGCTGTGGCCGGCATAAATGCGATCAGCCCTGTCATCGTGGCAATTGCCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTATACTGTGAGTGCGGCGCCGAGGTCATTTATCCGCCGGTGCCATGCGGCACCAAGAAGCCTATCTGCAAGCGACCCTGTTCGCGGACGCACGGCTGTGAGCATCCACCACAGCACAATTGCCATGCGGCGGCCAGCTGCCCGCCCTGCATGATGTTCACTACCAAGTGGTGTCATGGCAATCACGAACAGCGCAAGACCATACCCTGCTCCCAGGCGAGCTTTAGTTGTGGCTTAGCCTGCGGCAAGCCGCTCGCCTGCGGTCGCCACAAATGCATACGGCCCTGTCATGAGGGCGAATGCCAGCAGCCGGGCGAACTGTGCCGCCAGAGTTGCACCAAGCCGCGTCTATTGTGCGGTCACAAGTGCGCGGCCACATGCCATGAAGGCGTCTGTCCTGAAACGCCCTGCAAGGAGCTTGTCGAGGTGCAGTGCGAGTGCGGCAATCGCAAGCAGAGCCGCAGCTGCCAGGAGCTGGCACGGGAGCACAGTCGCATTGCCACCGCACAGCTGGCCTCCTCCATGGCGGAGATGTCGCGCGGCAACTACATGGAACTCAGCGAAATACTGGcgcccaacaaaaacaataaatccaACAAAACcttGAACTGCAATGATGAGTGTCGTCTGTTGGAGCGTAATCGTCGCTTGGCTATCGGTTTGCAGTCGCGTAATCCGGAGACGCAGCTCAAGTCGCTGACAAAGTACTCGGAATTCTTGCGGGGCTTTGCCAAACGCAATCCTGTGCTGACCAAGAGCGTCTATGAAACACTCACCGATCTGGTCAAGCTGGCCAAGGAGAGCAAACAGAAGTCGAGAAGTCACTCGTTTCCCACAATGAATCGTGAGAAGCGTCAATTGGTGCATGAACTATGCGAAGTTTTTGGCGTGGAGTCTGTTTCCTACGACAAGGAGCCCAATCGTAATGTGGTTGCCACAGCGCACAAGGAGCGGtgCTGGCTACCAGCCACTAGCATCATGGAGGTCCTGGCACGCGAATCCGGACAACGTCGCGTGCCCGTGCCCAGCAACAATGCATGGAGCCTCAAAAAGTAG
- Protein Sequence
- MAEYWQQQQQQQQQLLTNGADAAPAADASNTANGHNNNNNYVNFNQFITQHNLASSSLNYNIGGGGGAFGLTPSSSAASNFGGGDNLYATTFYASQNGDGAASGNSYNAAAAGAYPNLYTPFGNNPFAATGVGYDFSASKLQATAPEFVPNFAKLSLTSAAAATSPSASASSKNHNNNNTATQPNGAAGSNSAQPQPQRADQRQPKPHGSGNNSRQQRRNDYREDRNEDRYDRGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRANEELDTSNSNDSAQPSPEKQPSQQQHLLHQQQQISPRRAPDHEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQELPREYLCFCGKLKNPPLTRTELAHSCGELCCRVEGCSHACTLLCHPGPCPPCQANVSRSCGCGRTSKLMQCAMKQPLQCEAICDKLLNCGEHRCQQPCHAGKCEACAEQVQQHCHCGKQQREVQCTRESQDKRSYSCKECCSKPLPCGNHKCKDSCHAGACRPCKLSPTQITSCPCGKLPVPATQRSSCLDPVPTCEGVCGKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICKRPCSRTHGCEHPPQHNCHAAASCPPCMMFTTKWCHGNHEQRKTIPCSQASFSCGLACGKPLACGRHKCIRPCHEGECQQPGELCRQSCTKPRLLCGHKCAATCHEGVCPETPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPNKNNKSNKTLNCNDECRLLERNRRLAIGLQSRNPETQLKSLTKYSEFLRGFAKRNPVLTKSVYETLTDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWSLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00472738;
- 90% Identity
- -
- 80% Identity
- -