Dkan000887.1
Basic Information
- Insect
- Drosophila kanekoi
- Gene Symbol
- -
- Assembly
- GCA_037075305.1
- Location
- JBAMCE010000065.1:1117995-1124110[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.048 3.1 8.5 0.3 1 23 1273 1296 1273 1296 0.94 2 13 8.2 5.5e+02 1.4 0.2 1 23 1461 1483 1461 1483 0.91 3 13 0.00018 0.012 16.1 2.7 2 23 1486 1507 1486 1507 0.97 4 13 7.1e-05 0.0047 17.4 0.2 3 23 1515 1535 1513 1535 0.98 5 13 5.9e-07 3.9e-05 23.9 4.1 2 23 1542 1563 1541 1563 0.97 6 13 5.6 3.7e+02 2.0 0.4 5 23 1576 1594 1574 1594 0.96 7 13 1.4 92 3.9 5.4 3 23 1601 1622 1599 1622 0.93 8 13 0.15 9.8 6.9 0.2 2 23 1633 1653 1632 1653 0.96 9 13 5.7e-05 0.0037 17.7 0.4 1 19 1659 1677 1659 1681 0.95 10 13 1.6e-05 0.0011 19.4 0.5 1 23 1689 1711 1689 1711 0.98 11 13 0.00011 0.007 16.8 7.6 1 23 1717 1739 1717 1740 0.96 12 13 0.00021 0.014 15.9 5.9 1 23 1745 1767 1745 1767 0.98 13 13 0.029 1.9 9.1 8.2 1 23 1773 1795 1773 1796 0.95
Sequence Information
- Coding Sequence
- ATGGTGGACTGTGTGCAGTGCCCCGTGTGCACGCTGTATCTGCATGCGGGCATGAATCTCTCCGATCATTTGGAGACACATCCCAAGGAGCAGGTCATCAAGGCTCTGGTGCAAATGACCATAGCTGGCAACAATGGCATGGGCAGCGCCCTGGCTGCAGCTGTGCTCTCCGGCAGCGCTGCGGCAATAGATGGCGGCGCTGCATCTagctcatcctcatcatcatcatcatcatcaacgacGGCGGCTGATGTGAAACCAGTTGTTCTAGACGCAGCACCTGcaccaacaacatcaacagcatcaAAATCAACAGCACCCAAAGCTGCATTGCctagcagcagcaccaacaatagcaacaaattgaGCAATCCACCGATAAAGGCAGTTAAAAGCGCGCCACCCACGACTGAGGCGCCAGCCAACACATCCACTACACCCACCACTAGCAGCATGAGCGCCATTTATTCCGACTATCGCtatgagcagcagccgccgcagccgcagcaccaGCAGGCGACGCTGCACGGCTTCGCACGTGGTGCCACCACGCTGCTAATACCGCAAgcgccacaacagcagcatcagtaTCTGGCCAGCCAACAGCACTTTGCccaccatcagcagcagcagcaacagtcggcCATGAAGTACACCTATGCAGCAGCGCttccaccgccgccgccgccactgcAGCTCTTCGCACAGCAGGCGACGTCAACGCAGTCGCATCAGAAGCCACCACCCGCCTATGGCGCCGCCATCAGTCAAATTCGATCTCAgcacaaccaaaacaaacaacaacagcaacagacacaacaacaacaacacatgaGCGTACAACACACAGTTAACCTTGCACCACCGAGTGGCAAACATGGCAAAGTCCATACGGATATCTTCTTGAATCCACCGCCTCCACCAGCGCCACAGGTCTCGATTCCGTCaacatcgtcgtcgtcattgtCAAGACTGCAACATGCgcaacagcaccaacaatCTCTTGCAGCCGGCAGCTATGCAGGTGCCAACTGCGCCAGCTCCTCTGCGACTTTGATGTCATCCACCTCCGTTGGACGCGCCAGCAGCTGTCGCCAAACGAGCAATTCTCCTTTTGGTGCGCTCTTAAATGCCGCAGCGCAGGCCGCCTGCGCCTCGCCCGTGACCTCCAGTGCGTCTGTGCTGCGCTATGCCGAGTCCCCAGTGGCCCACTATCTAGAGCGAGAGAATGGCGACTTCATAGTCCAGGAGACGCCCAAGCACATTGTGGAGTGCGTCGAGAAGGATGACGGGGAGTTCTCCGTGATAGAGCGCATCTATCAGTCGCCTCCCAGCGTGCTGCACATacacgacgatgacgacgacgaagaGGAGGATGAAGATGAGAAGGGGTGGAACAGCGATGATGAGGACCACATGAAGGTGGAAGATCATGTAGAGGATGGCGACGACGAGCACGAGGATAGCCGCAGCAGAATTGCTCCCAAAACCACAACGAAAAAGTCACGCAAGACAAAAGCAAATGGCAGAAAGCACAAACGCGCCAGCAAGCATCAGCCGGAAGATGAGGACGACTTTATGAGTCTAGGCAGCAGCTGTGCCGAAAGTGAACATcatgcagagcagcagcagcagcagacgcaggtGCAGCTGTCGCTTGCGTCCTCTTCGCCAGTTCAGCTTAGCACGGCGCCTTCGACGAGCagtggagcagctgctggtgctgctgccactACCGTGTCCCCCTCCCCCACTTCTTCTGGCAGTGCCAACTCGACGCCCAGCGGCTCCACAAAGTCCAAAAAGAATCGCGTGACGGTACTCAGCGATGTGCCGCTTAACATGAACGAGTATTTGGATCTGGTGGGCAACATTGTGGCTTCAGGGCGCATTGGTGCAGCTCGTCCGTTTGCTGCCGTGGCGCCCATACCGTTGGTCAAGGTGGAAAAGGAGGAGCCAATGGACGACTACGACACCGTACAGGCTGAAATGGAGCAGGCAGTGGAGCAAAAGCCCAGCGTTGAACATGccattggcagcagcagcaacagcagcagcagtggccaCGGTACCACAAGCGTCATACGCATGGCAGCCAGCActagcaccagcaccagcagcggcaCAAACGTTGCTAACGAGGATCTCACACAGCCGCCGCCAATGAAAGTGGAAGTGGAGCCAacgatgctgctgccgcaacGATTTTCAGCTCCGGCGCAGCAGCGTGGACCCAAGAAATTAGTCATCAAGCCAAAGGCCACAGCGACGGCAACGACAAAAAAGACTGAGAACAACGCTGCCGAAACAGCCAGCATATCAAAGGCGTCCACAGAGCTGGTGCAGGTGAAGAGCGAGAATGTGGAGGCAGCCGTAACAACAAGCGGCAGCATACTAGAGAAGCATCTGACAACCAGCTATgcggcacagcagcaggcgcGCAAACACTCTGCAGTCAACGATGATGATGCACGTGTGCTGCTGGAGTTTGCCAACTCGAAGCAACTGCCGCTGGCGGGGAACAGCAACCAGACGACGTTTGTGGTAAATGCTGCCAGCTTTGCCTCGGCGGGCTCCGTCTTTGCCAGCGGCAGTAGCGGGAGCGGCAGCACGAAGAAGTCAAGCAAGCCGGGCGACGAGTACATTCTGCCAGATGATAACAATCTGGAGGTGGATGAAATTGTGATATCTTCCTCGTCATCCTATGCCTCTAAttcgcaacagcaacaattgcagcagttgcagcggcagtcgcagtcgcattcGCAACCAGCGCAGCAAAGCATGCAGCCGTCGCAGCAGCCGTCCGCCTTCAcagatttcaattttctttaccatcaaaatgcaacagcaacaacggcggcagcggcagcggcagctgcatctGCGGCGGCAGCCTCCCACTTTGCAGAATTTGGCATACAtcaagagcaagagcagcaggagcagctatTGCAGCATCATCCACAACATGGCTCTAGCGAGGCCACCAATGCCGCTACGCTGGCCTCCTCGTCTAGCAATTCATCGGTTATGGATCAGGATTGCTCCATGAATGCCACATTTCGCTTGGGCAAGCAACAATCCACATTGGCTGGCTGGtatcagccgcagcagcagcagccacaggcaAGCACTTCACACAGCTCCCATGTGGAACAATCGAGCCATTTTATTGCCGCACTCGCAGCCGTTGACTGCTGCAACAGTGTGGCGGGCGTTGATAGCGATGTCAAGTATTTGGATCTGGATACCTGCAAGCGGGAACAgttaagcaacagcagcagtcacTTGCCTTCTgtatccgcatccgcatcgaCAACATCTTCATCATTTGCGGCTGCCGCCACGGAGAGCAGTCTGGTTAGTGGCTTGGGCCTAAACATACGCACCGACGAGAAAATGCCCGCCAAGGGTGAAATCTCCGAGCAGGAAAGCAACTGCGATATTGAGAACTCTTGGAGTCAATCGATGTATGGTGACATATCACAGCGCTATTTTAGCAGCTATCATCAGCTGGCCGATTGGCGTCACGATTCCTATCCGCCGCAGGACCTCagtggccaacagcagcagcgtgaGCCAAAGCGCTTTGATTTCAACGCTGTCGCCTCGGAGTACGCGCAGTCGGGCGAGCTGGACGCCTCCTCGAGCTCAAATAGACACAATCAATTGCTGGATGCACAGCCCACTGCTTCCTCGTCGTCATCGGCTTTGCTGGCTGGTCCACCAATAGCCTCGACGTCACGTGCTGCTGCCGAAGCGGAGGCCGTCGCTGCAGCGATGGCGCAACGAAAGCCACCGCGTCGCAAGATCTACAAGTGTCCGCACTGTGTGGTCATCTTTGAGAAGCTGAAGGAGCGCAATGCGCACATGATTGGCGAACATAACTATGTGCGCCAGAATCGACGACTCATCTGCACGCAGCCGCAGGTCAATGCCACAATGCTGGCACAGCCGCCGGCtgaggagcagcaacaacagctccagcagcaagTCCTGCTGCAGTCTGTGGGGCAAAGCAATGGCGATGTTGTGCATGAGGATTCCAAGGATGGTATTGTAAAAATCAAGCAGGAACACTGCCAAGAAAAACAGGATTCATCGGAGCAGCTACTTGGCCAATTGGATATGCCCGATGTCAAGGATGCTGACCTGCTAGAAGCCAGCGCTGATAATGGTCGCGATACGGATATGAAGCCACCAGCCAACGTCTCAGAGCTGGACGAGAAGCCAGCCATAGCGCCGTTAGCCATGACCACACCAGCTGCCAAGCTGGCTGCTCTATATCGCATGCTCATTGCCTACAATGAGTCCAAGCTGGGCCAGGAGCGCAACAATCTTAGCGAGTTGGAGCAAAAGGCCATGGAGAAATCCATATTCCTCTGTTATGTGTGCCGCACAGATTTCCCATCAGTAAAGCTGTACGATGCACATTTGACAGAGCATCCCGCTGAGTGTTTCACCTGTGGCAAGAAATTCTATCGTTGGAAGAACTTTTCACTGCATTTGAAAAGGCATCTGGGCTGGAAGGAGTTCGGCTGTTATGTCTGCGACAAGAAGTTTGTGGTGCGCAGCGCGCTAGTGGAGCACATGCGCATGCACACTGGCCAGACGCCGCTCAAATGCAAGATATGCGGCAAAAAGTTCAAACGTTATTCGAACTTGACACAGCATCGCAAGCGTCACACCAAAATGATGGTGCGCAAGAAGGAGTACGTGTGCCATTGTGGCGAGGTGTTGCCCTCCAAGGCGCGCTTCCTGTGGCACAAGGAGACTCACGACTTGAAGCCTAAGTGCTGTCCGTATTGCTGCGATCGTTTCGTGCATGCCAATTCGCTGCGGAGGCACATTCGACTGGCCCATTCGGATAAGTTTGATTATGCCGAGCCAATGGAGTGTCCCATGTGCAAGCAGATCTTTGCCAAGACCTCCATCAAAGCGCACATGGCTACACATTCGACAGATCCGCAATACGATTGCGCCATATGCAACAAGAGCTTCTCTACCAAATGGAATCTGAAGATACATTCGTGGGTGCATGCAAATCGCACGGCCAAACCGTTCAAGTGCGAATACTGCCCCAAGGCATTCGTTCGCGAGCTGGACTTCAAGAACCACATGAATGCCCATAAGCAGATCAAGCCCTACACCTGTGAGTATTGCGGCTGCAAGTTCATACgtaaatacaattatatgcGACATCGACGGGAGCATCATGGCAACAAGAAGTTCACCTGCGATCAGTGCGACAAGTCTTTTCATCGTCATTACTATCTGATCGAGCATCGGCGCATCCACACCGGCGAGCGTCCCTTCCACTGCACCATCTGCGGCAAGAGCTCGACGACAAAGACCAATCACAATAAGCATCTGAAGATACATCATTCGCGGGATCCTTTTACCGTCGAGGTTTAA
- Protein Sequence
- MVDCVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIAGNNGMGSALAAAVLSGSAAAIDGGAASSSSSSSSSSSTTAADVKPVVLDAAPAPTTSTASKSTAPKAALPSSSTNNSNKLSNPPIKAVKSAPPTTEAPANTSTTPTTSSMSAIYSDYRYEQQPPQPQHQQATLHGFARGATTLLIPQAPQQQHQYLASQQHFAHHQQQQQQSAMKYTYAAALPPPPPPLQLFAQQATSTQSHQKPPPAYGAAISQIRSQHNQNKQQQQQTQQQQHMSVQHTVNLAPPSGKHGKVHTDIFLNPPPPPAPQVSIPSTSSSSLSRLQHAQQHQQSLAAGSYAGANCASSSATLMSSTSVGRASSCRQTSNSPFGALLNAAAQAACASPVTSSASVLRYAESPVAHYLERENGDFIVQETPKHIVECVEKDDGEFSVIERIYQSPPSVLHIHDDDDDEEEDEDEKGWNSDDEDHMKVEDHVEDGDDEHEDSRSRIAPKTTTKKSRKTKANGRKHKRASKHQPEDEDDFMSLGSSCAESEHHAEQQQQQTQVQLSLASSSPVQLSTAPSTSSGAAAGAAATTVSPSPTSSGSANSTPSGSTKSKKNRVTVLSDVPLNMNEYLDLVGNIVASGRIGAARPFAAVAPIPLVKVEKEEPMDDYDTVQAEMEQAVEQKPSVEHAIGSSSNSSSSGHGTTSVIRMAASTSTSTSSGTNVANEDLTQPPPMKVEVEPTMLLPQRFSAPAQQRGPKKLVIKPKATATATTKKTENNAAETASISKASTELVQVKSENVEAAVTTSGSILEKHLTTSYAAQQQARKHSAVNDDDARVLLEFANSKQLPLAGNSNQTTFVVNAASFASAGSVFASGSSGSGSTKKSSKPGDEYILPDDNNLEVDEIVISSSSSYASNSQQQQLQQLQRQSQSHSQPAQQSMQPSQQPSAFTDFNFLYHQNATATTAAAAAAAASAAAASHFAEFGIHQEQEQQEQLLQHHPQHGSSEATNAATLASSSSNSSVMDQDCSMNATFRLGKQQSTLAGWYQPQQQQPQASTSHSSHVEQSSHFIAALAAVDCCNSVAGVDSDVKYLDLDTCKREQLSNSSSHLPSVSASASTTSSSFAAAATESSLVSGLGLNIRTDEKMPAKGEISEQESNCDIENSWSQSMYGDISQRYFSSYHQLADWRHDSYPPQDLSGQQQQREPKRFDFNAVASEYAQSGELDASSSSNRHNQLLDAQPTASSSSSALLAGPPIASTSRAAAEAEAVAAAMAQRKPPRRKIYKCPHCVVIFEKLKERNAHMIGEHNYVRQNRRLICTQPQVNATMLAQPPAEEQQQQLQQQVLLQSVGQSNGDVVHEDSKDGIVKIKQEHCQEKQDSSEQLLGQLDMPDVKDADLLEASADNGRDTDMKPPANVSELDEKPAIAPLAMTTPAAKLAALYRMLIAYNESKLGQERNNLSELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMMVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTDPQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHMNAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKKFTCDQCDKSFHRHYYLIEHRRIHTGERPFHCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00563356;
- 90% Identity
- iTF_00563356;
- 80% Identity
- -