Basic Information

Insect: Drosophila jambulina
Gene Symbol: -
Assembly: GCA_018152175.1
Location: JAECXH010000012.1:29656272-29660184[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 7.9e-05 0.0057 16.9 0.4 1 23 172 195 172 195 0.96

2 14 0.0016 0.11 12.9 3.1 2 23 244 266 240 266 0.90

3 14 0.0067 0.49 10.9 0.8 1 23 361 384 361 384 0.93

4 14 0.022 1.6 9.3 2.9 2 23 433 454 432 455 0.94

5 14 0.00061 0.044 14.2 0.4 1 23 524 547 524 547 0.92

6 14 1.8 1.3e+02 3.2 0.1 2 14 566 578 565 590 0.85

7 14 0.00061 0.045 14.1 3.3 2 23 598 620 598 620 0.96

8 14 0.046 3.4 8.2 0.8 1 23 713 736 713 736 0.95

9 14 4.5e-05 0.0033 17.7 0.3 1 23 770 793 770 793 0.93

10 14 0.0038 0.28 11.6 1.5 2 23 843 865 842 865 0.95

11 14 0.017 1.2 9.6 1.8 1 23 960 983 960 983 0.91

12 14 0.0019 0.14 12.6 1.4 1 21 1035 1055 1035 1056 0.95

13 14 3.2 2.3e+02 2.4 0.1 3 23 1088 1111 1086 1111 0.74

14 14 3.8 2.8e+02 2.2 0.3 1 11 1131 1141 1131 1155 0.72

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	7.9e-05	0.0057	16.9	0.4	1	23	172	195	172	195	0.96
2	14	0.0016	0.11	12.9	3.1	2	23	244	266	240	266	0.90
3	14	0.0067	0.49	10.9	0.8	1	23	361	384	361	384	0.93
4	14	0.022	1.6	9.3	2.9	2	23	433	454	432	455	0.94
5	14	0.00061	0.044	14.2	0.4	1	23	524	547	524	547	0.92
6	14	1.8	1.3e+02	3.2	0.1	2	14	566	578	565	590	0.85
7	14	0.00061	0.045	14.1	3.3	2	23	598	620	598	620	0.96
8	14	0.046	3.4	8.2	0.8	1	23	713	736	713	736	0.95
9	14	4.5e-05	0.0033	17.7	0.3	1	23	770	793	770	793	0.93
10	14	0.0038	0.28	11.6	1.5	2	23	843	865	842	865	0.95
11	14	0.017	1.2	9.6	1.8	1	23	960	983	960	983	0.91
12	14	0.0019	0.14	12.6	1.4	1	21	1035	1055	1035	1056	0.95
13	14	3.2	2.3e+02	2.4	0.1	3	23	1088	1111	1086	1111	0.74
14	14	3.8	2.8e+02	2.2	0.3	1	11	1131	1141	1131	1155	0.72

Sequence Information

Coding Sequence: ATGGAAGGCATGGACCTGTGGACGTCAATGTTCTCCTCAGAGTTCGAGGACGGTGAGCAGGAAGGGGGCGGCGAGGGAGAGCTGCTGGAGGGTGGTGAGGATGGCGCTCAGTACGGCAACGGAAATGGCGACCTTCTCGACGACACGGCGATCCTGGATGCCGGAGATGGTGTGGACGACCTGCTAGATGGCGAGGACGATGAGCGGGAGGGGGACGACGAAGATGGCATGGAAAATGTGTCAAAGGGACCGGAACCGGACGACGATGCGCTCTTTGACTTCGAGCTGGAGCCGATTGTGAGTATTGGGGAGCAGTCGCCGGCTTCGGTTATGGCGCCCGCCGGTCCGATGGGCGCTAAAATGCGCCCAGCTTTGCAGCGGCATTCACTGCCACCCCTGAGTCGGCCGCGGTCCGATACGCGACCGATTGGGTTTCCCGTGCGTCCCACCACCTCACAGATCAATGCCACCGATGAGAACGGCGTACCCATCAACTACGAGCTGGGCGTGGTGTACATCTGCCCAGCCTGTGGCGGAGAGTTCCGGCAGCAGGATCACTGGAAGCGGCACATGAATCAAATTCATAGGTACAACACCCTTAGGGGTCTCAACTTTGCGCCGCTGGACAAGCTATACCAGCGCTGCAAAGAGTGCCACAAGCGAATCGCTATGCACAGCCGGGAGAACCTGCTGAAGCACAAATTCACGCACCTGCCGTTTCGGTGCACCAAGTGCTACATTTGCAAGCGGGAGTACAAATACAGACAAGATCTAATGGTGCACCTGCGCATGGTCCACTGCGACGAAGTGGTGGCCATGATGCGGGAAGGTTATAATGCTGCCGGGCGGAAAACCCGTGTCCGAGAGTCTCGTACTGAGCAAATGCAGAGAGAGAAGAGTTTTCTAGAGGATGGGGACCTAGATCATATCGAGGTGCGAAACGAACTGCTTGAACCGGATGTTGATGAGTCCGGCGGAATGGAGCAACATCCTTCGCTGCTTGTAGAGGAGACGCCCCATAAGAAGCGACCTGGTGGCAGTGGCGGAGAAGCCGCTGAGCTGTGCGAGGACTACATCCACTACATGTGCCCTGACTGCGGCACCGAGTGCGACACCCATGCCCAGTGGAGCCAGCACATTGAATTTGTCCACGACTATGTCAGCCGGCGTGGCCTTAACTTTCGGAGTGTCGACATGCAGATGCAGTGCCTTGAATGCAAGAAGATTGTGACACCCAACACCATCAAGTCGCTGCGCTCCCACAAATTCAGTCACTTGTCGCATCCCGAGTGGCTACGCTGCAAGCTCTGTTACAAGGGCTACACGGAACATCCGGAACTCGTTAGGCATCTGCTCAAGCATCATAATCTGGAGACTCTGATGTCGGAGGACCCTGGCCAGGAAGAGGGGGATGCCTCACTGACCATAGATGGGGAAAATGAATGCGAAGACAATGGCAATGGCGAAGGAAACGGCGTCGCCTTGGACGAGGATTCACCGTACTTTGAAGACGCCCCCCGACGCGGCGGTCGTATTAGCAGCGATGACATTTTCGAACCGCACATTGACTACCTCTGTCCGCAGTGCGGCAAGGAGTTCATCGAGAAGAAGCACTGGCGCACTCATGTAGTCATGGCGCACAGCATGAACGATCTGTCCAAGCTGAATTTCGAGATGATCAACGAACGGCAGCTGAAGTGCACCGAATGCGACAAGATCATCACGAACGCCTATGGAATACAGAATGCCCAGCAGCACAGAATCACCCATCTGCCATTCAAGGCCTATGCTAGATGCCGCAAGTGCCACAAGTCTTACACTGACCGAAAAGGTCTGGTCAAGCATCTGGCCACCTATCACCGCATCGGCTGTGATCCGAGGAAGTCTGGTGGGGGTGCAGCACCACCTTTACCCATGGTAACAACACCCAAACAGCCTCGCAAGCAGATCGTCACAGTGGCCAATGAGACCTACGAGATTATCTACCTGGATGATGTGGAGCAGAGCAGCTTGGATGAGGAGAATGACTTTGGGGAGCAGATGCTTGCTGACGAGGACGATTACCCGGTTATCCAGCCACCGCAACAGCGTCTGGTGGCGCCTTCACCACGACCCACGCAGAACACTCAGCATCGGTACAAGTGTGTCCACTGCAGCACTCTCTTCCCCACCCAGGTTGCCGTACGGATGCACATCAGCGAGAAACATAGCCGGAAGCCACATCAGACGGGCAGAAGGCATCGTCATTTGATTGCAAATTCCGGTGGAGCAGATTCAGGCCTTACCACCGTGGAGCAGAATTACATCTTCCTGTGCCCGTCATGCGGCAAGGAGTACAAAACGCAGTACGAGTGGCGGCGTCACATCAACGAGGAGCACAACTTTGACAAGCGGAACTACCTGAACATGCGGCAGTTGGACAAATATCGCTACCAGTGCACACAGTGCAAGGACATTGTCTGCAACTCCAAGCTGAAGGGTCTGCAGGACCATCATTTCCGTCACCTGCCATACCGCCTGTATCTCAAGTGCTTAGTCTGTGGCACCTGCTATAACCACAAACCGAACATAGCTGCACATCTCAGGGCGCGCCACAACATCTACGACAAGGAGTCGTCCCTGATCACCAAGCCGATTAAAACGTATGGTCGGTCCAAGGATGGGGATAAGGAGAAGATTCCGCTACCGACTTCCGCTCCGGCAGCAGGTTCTCCACCCGGCTGCTCCTCCTCCGCCTCTGCTGCTGTTTCTGCTGTGCCAGTGGTCAGTCGAACTCTTAAACCCCAACCCGGTGACCTGCCAACACGACCCGCTGGCCTCAACACCTTGGAGGATAGCATCTCGTACCACAATGCCGTAGATATGGACTTCATCACGTACTTTTGTCCGAAGTGCAACCAAAACTTCGACTCGCATGCCTTCTGGCGCAAGCACATCGTGGAGCAGCACAACTTCAACAGCCGCGAGGGTCTGAACTTCCGGCAGATCGACAACCATCACTACCTGTGCCTGGAGTGCTACAAGCGCGTCACGGTGACCCACACCAAGGGCGCCATAGGTCAGCTGCAGTCGCACAAGTTCCGGCACCTTCCCCATCGCTCCTTCAAGTGTCTGACCTGCGACGCCTCGTTTGTACGCAAGCAAATGTTTTTCAAGCACCTGAACCGAGACACCAACCGGTGTGACAATCGCCCGCAACGCGATTTGGACGATGAAGAGCCCAGCCAGGACTCTCAGCTGACCACCATTTACCACTTGGCGTGTCCGCAATGCGGCGATGACTTCAACACCCCCAGTCGAAAGCAGTGGCGCGATCACATTAACGTCTTTCACGGCCTCACCGCGCTGGACCTGCTGCACATGAACAAGGTGGATGGCGCGGAGGATCTCTATCGCTGCCAGGACTGCAACGAGGAGCTGCAGACGAACCGGCAGTGGGTGCTGCAATACCACCGCTTCCAGCATCTGCCACAGCCGGCTTACATCCGCTGCCAGCTGTGCGAGCAGAACAGTGAGCGAGATGCAGCAGTGGGATCCGGAATGCATAGTCTTCGCGAGCTGCAGCAGCATCTCCGCAAGCACCATCCCACAACGGTGGGCGAGAACGAGATGCAGATACTCCGCGAACAGATTGCCCAGGAGGAGAAGGAGCAGGATGAGACAGTGGGCGTGGCTGCAGATGAAGAGGACAACCAGACGGGCCAGGACTCAGGACCATACATGCCGCTTCCGCCGCATTTATTGGACGATGGAGACGACGTGGAGTTTGAGGACCAGTATTTGCTGGGATAG
Protein Sequence: MEGMDLWTSMFSSEFEDGEQEGGGEGELLEGGEDGAQYGNGNGDLLDDTAILDAGDGVDDLLDGEDDEREGDDEDGMENVSKGPEPDDDALFDFELEPIVSIGEQSPASVMAPAGPMGAKMRPALQRHSLPPLSRPRSDTRPIGFPVRPTTSQINATDENGVPINYELGVVYICPACGGEFRQQDHWKRHMNQIHRYNTLRGLNFAPLDKLYQRCKECHKRIAMHSRENLLKHKFTHLPFRCTKCYICKREYKYRQDLMVHLRMVHCDEVVAMMREGYNAAGRKTRVRESRTEQMQREKSFLEDGDLDHIEVRNELLEPDVDESGGMEQHPSLLVEETPHKKRPGGSGGEAAELCEDYIHYMCPDCGTECDTHAQWSQHIEFVHDYVSRRGLNFRSVDMQMQCLECKKIVTPNTIKSLRSHKFSHLSHPEWLRCKLCYKGYTEHPELVRHLLKHHNLETLMSEDPGQEEGDASLTIDGENECEDNGNGEGNGVALDEDSPYFEDAPRRGGRISSDDIFEPHIDYLCPQCGKEFIEKKHWRTHVVMAHSMNDLSKLNFEMINERQLKCTECDKIITNAYGIQNAQQHRITHLPFKAYARCRKCHKSYTDRKGLVKHLATYHRIGCDPRKSGGGAAPPLPMVTTPKQPRKQIVTVANETYEIIYLDDVEQSSLDEENDFGEQMLADEDDYPVIQPPQQRLVAPSPRPTQNTQHRYKCVHCSTLFPTQVAVRMHISEKHSRKPHQTGRRHRHLIANSGGADSGLTTVEQNYIFLCPSCGKEYKTQYEWRRHINEEHNFDKRNYLNMRQLDKYRYQCTQCKDIVCNSKLKGLQDHHFRHLPYRLYLKCLVCGTCYNHKPNIAAHLRARHNIYDKESSLITKPIKTYGRSKDGDKEKIPLPTSAPAAGSPPGCSSSASAAVSAVPVVSRTLKPQPGDLPTRPAGLNTLEDSISYHNAVDMDFITYFCPKCNQNFDSHAFWRKHIVEQHNFNSREGLNFRQIDNHHYLCLECYKRVTVTHTKGAIGQLQSHKFRHLPHRSFKCLTCDASFVRKQMFFKHLNRDTNRCDNRPQRDLDDEEPSQDSQLTTIYHLACPQCGDDFNTPSRKQWRDHINVFHGLTALDLLHMNKVDGAEDLYRCQDCNEELQTNRQWVLQYHRFQHLPQPAYIRCQLCEQNSERDAAVGSGMHSLRELQQHLRKHHPTTVGENEMQILREQIAQEEKEQDETVGVAADEEDNQTGQDSGPYMPLPPHLLDDGDDVEFEDQYLLG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: iTF_00541377;
80% Identity: -