Basic Information

Insect: Drosophila jambulina
Gene Symbol: -
Assembly: GCA_018152175.1
Location: JAECXH010000113.1:13917736-13923528[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0049 0.36 11.3 2.1 1 23 757 779 757 779 0.98

2 8 8.2e-05 0.006 16.9 1.4 1 23 811 833 811 833 0.97

3 8 0.11 8.3 7.0 0.4 1 19 841 858 841 864 0.81

4 8 0.0015 0.11 12.9 0.0 3 23 871 892 870 892 0.96

5 8 0.00016 0.012 16.0 3.5 1 23 898 920 898 920 0.97

6 8 0.011 0.77 10.2 0.2 1 23 927 950 927 950 0.95

7 8 0.0002 0.015 15.6 2.2 2 20 957 975 956 978 0.91

8 8 0.053 3.9 8.0 9.1 1 23 984 1007 984 1007 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0049	0.36	11.3	2.1	1	23	757	779	757	779	0.98
2	8	8.2e-05	0.006	16.9	1.4	1	23	811	833	811	833	0.97
3	8	0.11	8.3	7.0	0.4	1	19	841	858	841	864	0.81
4	8	0.0015	0.11	12.9	0.0	3	23	871	892	870	892	0.96
5	8	0.00016	0.012	16.0	3.5	1	23	898	920	898	920	0.97
6	8	0.011	0.77	10.2	0.2	1	23	927	950	927	950	0.95
7	8	0.0002	0.015	15.6	2.2	2	20	957	975	956	978	0.91
8	8	0.053	3.9	8.0	9.1	1	23	984	1007	984	1007	0.96

Sequence Information

Coding Sequence: ATGTCCCGTATTAAGGTGGCAACCCTGCGAATCTCTCCCACCCACCACATTCCGCAGTTAGTAGTTTTTGCCGTGAAAATGGTCGGCTTGAAGCGGAAGTTGGTTGATCAGTCACTAAATCTACTGGACAGCCTCAACACGGCATTGCGGTGCGATGCTATTCAAATCTTGCTGCAGACTCTTAAGTGCAAATATCCGGAGGCCTGCGACCAAGTCGTCAGGAATCTGTTCAGTCACATAACTGCATCCAATGACAGCGGCGGAGGTGGTGGCGACGGGGCTCAGCAGCAGGAGCTAGCGAGGACGAAGCAGCTGCAGCTGCTGCTGACCGCCAAGAAGGAGAAGAAGGAACCGGGAACGGGACAGGAGGCGGAGATTAAGCGCGAGAACGACGACGATGAGGCTGGATCGACGGATCTAAACCAGAACTTTGAAAAGATCCTCTGCAAGGAGGAGTTCCTGTGCCTCGAGGAGGAGGAAGAGGATTTCCTTGACGATGCGGACACCCAAAACTCGTCTTCCCTGCAGTTTAATGCTGGCAACAACGTGGACGCCCTGGCCCTAGGCCCCGGCGACCCGCTGGACCTGATCCATACGGGGAGTTCCCTGTTGGTCAAGCGGAAGTATGCTGCTACCTTTGAGGACGAGGACCAGCTGGCCGAGGATGCAAACAGCAATAGTAGCGACGGCAAGCTGGTCAAGAGGAAGCGCACCAACAACATGCACCTGACCGTGACAAGTGTGCGGCGGAAAGAGACACGCTCTCGACTGGGAGAGGGGTACATCTTCCACGAGGACAGCCAGTACACGATGCGCTATCACCACAGCACCGGCGAGTTCAGCGAGCGGGCCTTCAAGGCCCAGTTCCGGGCTTTGCTGCGCATGGCGCTCAGCCAGCACCACAAGCCGTTCCTGCGGCAGTTCTACGAGAACTTTGTGGTGAACGGGCGTCTGTTGGGTACCACGCCCTCGGCGCGAGTGCTCAAGGAGCTGCGCGAGCAGCGGTTAGAGGAATGGCGCCGTCATCGGGAGCGCCGTCAGTTGGTCAGCATGATGAAGCAGAGTGAGGAGAAGTTAGAAGAAATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGCCATCTCGTTTGGCGACTCCGAGCTGGAGTCGGAAACGGAATCGCAGCTGTCGTCGGCTGCTCAAGAGATTATGAAGTTTGAGGAGTTCATTGACGAGGGTGTAGGCGCGGGACGTCTGATTGATGGTCTGGAGATGGAGCTGGAGACCGATGACATGTTAGCTGGAGCCGGCAGTGTCCTGGATAGTGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGTGGTCCTGGAGAACAATAGTCATCATTCGCATCACCTAAGTAGCAGCAGCAGCGCAAATCTTGTGATCAACGGCCTTACGTCAAGCAATAGTATCAGCAACAACAATAATAATAATAATAACAATAATGGCAGCCTGCATTGTCCGCAATTAACACTGCAGGCGCAGGATCAGGCGGGAGCGTCCATAAAGCCGTCGCACCACTTGCCAATGTCCATGTCATTGGAGAACAGGGATGTAAAGGGCGGCCAGACCCTTGGCAATGCCAATGTGATCATGCCGAGCGGGAGCTCGGGTCACGCCAGCGAGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGGAACTTCCATGATGGTCAACCGTCAAATGCCCGCACTGGCAGCTTTGTCGAATCTTGGCGATACTCCTCCTATCAGCAGCCAGTTAAACTCCTCCCTGGAGCTGGACGACAACGACCTGTCGCCAGATGAGGAGGATGACGACCTGGAGCATGACCTGGATGAGCTGGAAGCGGCCAAACAGCAGCTGATAGATGGCGGTAGCAGCAGCAGCACCTCCCTACAGGCGCCGCCATCGCAACACGGCAGTGGCAGTGGCGGCAGCGGAGGTCAGACACCCGGCAGCAAGAAGAACAAGCCCAGCTACAATTGTCTGCTCTGTGCCAAGTCGTACCGCAAGAGGAAGTCTCTGCTTGACCACTACAAGATGCATCCCGGTTTCTGTCATGATTGCGGACAGCCCAACGGAAATACGTTAGAGGAAGTAATCCTCCACAACAGGACGATGCATGTGAAGGAGTTTCCTTTCGTGTGCGAGACGTGCGGGGAGTCGTACTCGCGGAAGCAGCAGTTCCACGCCCACGTGGAGTCGCACAACAAGAAGGAAATCAAAACATTTCCCTGCGGCGAATGCGGGTTGAAATTCCCACAGAAGAAGCTGCAACAGCACTTCGAGGAGACGGGCCACAAGGCCGACGGGGCCATTTGCGAGGTGTGCGGCGAGGAGTTCCAGTCGAAGAACGCCCTGTACCAGCACATCATTCGCGTTCACAAGCGCGACAACTTTTTCGAGTGCCACATTTGCCATAACCGCTTCACGCTAAAGGCGAACCTGGAGCGCCACGTGCAGCTGCACACCGAGGTTAAACGGCCCTACGTGTGCGATCTGTGCGGCTCATCCTACTACACATATCCCGCGCTCAAGGAGCACTACAGCAATGCCCACGTCGACGTGTCCGAGTGCAAGTGCACGCTGTGCGGCAAGCGCTTCGGATCGGCCAAGTCGCTTCAAAGGCACCTGCCATCGCACTCGGAGGAGCGTCCGCACTGTTGCAACTATTGCGATCAGACCTTCAAGTGGAAAACGCATCTAGTGCGCCACAAGCAGACAACGCATGGAAACGAGCCGCCGCCTCCTAAGAAGGGAAAACAGCGCTTCCCCAAGGCGAACGAGGAAGTAGAAATGGCTTCCCTGCCGGATATGCCCGGACCGCCGCCTGTAAAGGCCAGCAAAAAGGCGGTGACGAGTAAAGCGAAAGCGCAAGCTGCAGTCGCCGCCGGAGGGGCCTCCCAGTTGCAGCATCAGCAGAAGGGTGTTGCAGCGACGCCGACGCCACCACCGCCGGTGTCCACGACTCCGGGGTGCATGCAACAAGATCAGTTTAATGCGGCTATGGTTAGCAGCAATAGCTCTCAGTCCTCCACGGCGTCCACATCGCAGCACTCGGTGTCGACGACGCCGCACGGAAGCGTATACGACCGCACCGGAGTTGGCGTCGGAGTCGGAGTGGGCTATTCCATGCTGGGAGATGAATCAAAGGCGGTGCTGCCGCCAATGATGGGTGGCATGATGCAGCAATTGCCACCGCATGGCCAGCAACCGGACTTAATATACTACCCAGTGAAGAACGATTGA
Protein Sequence: MSRIKVATLRISPTHHIPQLVVFAVKMVGLKRKLVDQSLNLLDSLNTALRCDAIQILLQTLKCKYPEACDQVVRNLFSHITASNDSGGGGGDGAQQQELARTKQLQLLLTAKKEKKEPGTGQEAEIKRENDDDEAGSTDLNQNFEKILCKEEFLCLEEEEEDFLDDADTQNSSSLQFNAGNNVDALALGPGDPLDLIHTGSSLLVKRKYAATFEDEDQLAEDANSNSSDGKLVKRKRTNNMHLTVTSVRRKETRSRLGEGYIFHEDSQYTMRYHHSTGEFSERAFKAQFRALLRMALSQHHKPFLRQFYENFVVNGRLLGTTPSARVLKELREQRLEEWRRHRERRQLVSMMKQSEEKLEEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAISFGDSELESETESQLSSAAQEIMKFEEFIDEGVGAGRLIDGLEMELETDDMLAGAGSVLDSVXXXXXXXXXXXXXXXXXXXXXXXXXXGVVLENNSHHSHHLSSSSSANLVINGLTSSNSISNNNNNNNNNNGSLHCPQLTLQAQDQAGASIKPSHHLPMSMSLENRDVKGGQTLGNANVIMPSGSSGHASEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTSMMVNRQMPALAALSNLGDTPPISSQLNSSLELDDNDLSPDEEDDDLEHDLDELEAAKQQLIDGGSSSSTSLQAPPSQHGSGSGGSGGQTPGSKKNKPSYNCLLCAKSYRKRKSLLDHYKMHPGFCHDCGQPNGNTLEEVILHNRTMHVKEFPFVCETCGESYSRKQQFHAHVESHNKKEIKTFPCGECGLKFPQKKLQQHFEETGHKADGAICEVCGEEFQSKNALYQHIIRVHKRDNFFECHICHNRFTLKANLERHVQLHTEVKRPYVCDLCGSSYYTYPALKEHYSNAHVDVSECKCTLCGKRFGSAKSLQRHLPSHSEERPHCCNYCDQTFKWKTHLVRHKQTTHGNEPPPPKKGKQRFPKANEEVEMASLPDMPGPPPVKASKKAVTSKAKAQAAVAAGGASQLQHQQKGVAATPTPPPPVSTTPGCMQQDQFNAAMVSSNSSQSSTASTSQHSVSTTPHGSVYDRTGVGVGVGVGYSMLGDESKAVLPPMMGGMMQQLPPHGQQPDLIYYPVKND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00533319;
90% Identity: -
80% Identity: -