Basic Information

Insect: Drosophila jambulina
Gene Symbol: RREB1_1
Assembly: GCA_018152175.1
Location: JAECXH010000006.1:14345945-14351838[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.031 2.3 8.8 0.8 1 21 214 234 214 236 0.93

2 12 0.00029 0.021 15.2 0.2 1 23 246 268 246 268 0.98

3 12 7e-05 0.0051 17.1 7.3 1 23 274 296 274 296 0.98

4 12 1.8 1.3e+02 3.2 3.7 2 19 519 536 519 538 0.97

5 12 0.0076 0.56 10.7 0.1 1 23 684 706 684 706 0.97

6 12 1.1e-05 0.00077 19.7 0.7 1 23 716 738 716 738 0.99

7 12 0.00072 0.052 13.9 2.0 1 23 744 767 744 767 0.97

8 12 0.0026 0.19 12.2 2.0 1 23 1049 1072 1049 1072 0.95

9 12 7.5e-05 0.0054 17.0 0.3 2 23 1455 1476 1454 1476 0.97

10 12 0.13 9.1 6.9 6.3 1 23 1482 1505 1482 1505 0.97

11 12 0.0073 0.53 10.8 0.5 3 23 1718 1738 1716 1738 0.96

12 12 0.0012 0.088 13.2 4.8 1 23 1744 1766 1744 1766 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.031	2.3	8.8	0.8	1	21	214	234	214	236	0.93
2	12	0.00029	0.021	15.2	0.2	1	23	246	268	246	268	0.98
3	12	7e-05	0.0051	17.1	7.3	1	23	274	296	274	296	0.98
4	12	1.8	1.3e+02	3.2	3.7	2	19	519	536	519	538	0.97
5	12	0.0076	0.56	10.7	0.1	1	23	684	706	684	706	0.97
6	12	1.1e-05	0.00077	19.7	0.7	1	23	716	738	716	738	0.99
7	12	0.00072	0.052	13.9	2.0	1	23	744	767	744	767	0.97
8	12	0.0026	0.19	12.2	2.0	1	23	1049	1072	1049	1072	0.95
9	12	7.5e-05	0.0054	17.0	0.3	2	23	1455	1476	1454	1476	0.97
10	12	0.13	9.1	6.9	6.3	1	23	1482	1505	1482	1505	0.97
11	12	0.0073	0.53	10.8	0.5	3	23	1718	1738	1716	1738	0.96
12	12	0.0012	0.088	13.2	4.8	1	23	1744	1766	1744	1766	0.99

Sequence Information

Coding Sequence: ATGGAGCGCAAGCGAAGAGAGTCCACAACATCAGAATCCTCTCTCGAGCATCTCGACCTGGGACGAACGCCAAAGAAGCTCAGCGGCAGCGCCGGCGCTGCGCAGTCGACATCGACGCCGCACGAGGTGGCAGCGACGTCGCGCAAGCGCAAGTTGCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGATGAGGACGAGGACGAGGAGGAGGCACGTCCCCTCAATCGGCACAAGCAGCGACGCGGCGCCCAGGGATCCTCCTCCGCCTCCGCCTCCATTGTGGTGGACTTCTCCGCCGGCGATGCCAGTTCGCTGCGCAAGAAGTTCCGCCTCAATCGCTCGGCGGCGGCCAGTCTCTCGGAATCGGGATTCGTGGACGCCAGCAGCACTGGCCACAGTGGCTATCTGGGCAACAATAGCAGCAGCGCCAGCACAAGCCTGGCAGCGCCTTCAGTTGCCACAACCGCCGCCGGTGGAGCAGCTCCCGCCGCCTCCGCCTCCGCCTCGAGTAGCAGCACCAGCACTAGCAGCCACAGCAGTTCCGGTGGCTCCTCCCCGCAGGGCCTTTGCCTGTCCAGCGGCGAGTCGGGCATTGGGGCCGGTGATGAGCACATGAAATACCTGTGTCCCATCTGCGAGGTGGTCTCCGCCACGCCGCACGAGTTCACCAATCACATTCGATGCCACAACTATGCCAATGGGGATACGGAGAACTTCACCTGCCGCATTTGCTCCAAGGTGTTATCTTCGGCCTCATCCCTGGACAGGCACGTGCTGGTTCATACGGGCGAGCGGCCGTTCAACTGTCGCTACTGCCACCTGACCTTCACCACCAATGGCAACATGCATCGCCACATGCGCACTCACAAGCAGCACCAGACAGCTCAGTCCCAGTCGCAGACGCAGTCCCAGTCTCAGGCCCAATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGCTGGCTAGCTCCATGCCAGTGCGGGCGGAGAGCTATGAAAGCGATGCCAGCTGCTCCACGGATGTGTCCAGCGGTAATAGTCGCAGTAGTAGTTTCCTCCACAACAACAACAACTCCCACAAGGCTACCAACAACAACAACAACAACAGAGGCAACAGCAAACAGGAGCTGGAGGGATTGGAGGAGCAGGAGCAGGAGCTGGAGCTGGATGAGAGCAAGCAGCAGCTACAACGTCGCCTGAAGACGACCATCAACAACAATGTGATCGAAAACCATGCGGACGGGGATCTTCATAACGAGGAAATGGAGGATGCAGATGCAGATGTGGCCATGCTCACAAGCACTCCGGATGTGGCCACCCTGCTGGCAGGAGCCAGTGCCTCCGGTGCTGCCTCACGTTCGCCCTCGCCCTCGCCACCGGGCTCGCCCGGTCTGCTGCTGAGTTGCCCCGCCTGCGGAGCCTCCGATTTCGACAACCTACCAGCTTTGTGCGCCCATCTGGATGCCCGGCATTCGGACATACCGGCTAAGTGCCGGGACTGTGAGGTGATCTTTGCCAGTCATCGCCAGCTGCAGGCACACTGCTGCAGGGGAGGATCTGGATTGGTCGTGGGACTGCCGCCCATGCTGGGTGCCAGTAGTTCGCCGCTGCATGCCGACGAGGATGCCGAGGACGAGGAGGAGGCGGATCACGAAGATGATGAGGAAATGGAGCAGAAGCGTGACGACTTCTTCCACAAGCTGTACTTGAAGGGTACCTCAGGTGGAGCTGGTGCAGGGGGCAATATCTCCCATCCGCCATCGCCCATTAAGCACGAGCCGGCGGACAGCAAGGATCTGGCCGATATACAGAGCATCCTGAACATGACCAGCTCCAGCTGCACCAGCAGCTTCCTGCGCAACTTCGAGCAGTCGGTGAACACGCCCAGCTCCAGCCAATACAGCCTGGATGGGCGCGATCAGGAAGAGGAGGCCCAGGATGCCTTCACCTCGGAATTTCGGCGGATGAAGCTGCGCGGTGAGTTCCCCTGCAAGCTCTGTTCAGCTGTCTTTCCGAATCTGCGCGCCCTCAAGGGTCACAATCGGGTGCATCTCGGTGCGGTTGGGCCCGCCGGACCCTTCCGCTGCAACATGTGCCCCTACGCTGTCTGCGACAAGGCGGCCCTCGTGCGGCACATGCGCACCCACAATGGCGACCGTCCGTACGAGTGCGCCGTCTGCAACTATGCCTTCACCACCAAGGCCAACTGTGAGCGCCACCTGAGGAATCGGCATGGCAAGACCAGTCGCGAGGAGGTGAAGCGTGCCATTGTCTACCATCCCGCCGAGGATGCCGGCTGCGAGGACAGCAAGTCGCGGCTGGGTGAGGATCTGGCCGATATGAGTTTCCGTTCAATAAGTCCCACGCCGCCGCCGCCGCCACCTCCGCCGCCAGTGGGTGAGAGCAGCAGCAGCAGCAGCTCCCAGCTGAAGCACATGCTCCTGGGCGAGCAGCAGCATCATCATTCCCATTCCCATCACCATCACCATTCGGTGGCCCCAGCTCAGCCACCGTTAAAGATCCAGGTGAAGAGCCTGGACCAGCTGGTGGACAAGAAACCAGCGGCAGTTCAGCAGCCGGAGAAGAGCTCCTCCTCCGCCCTGGACTTTAGCATGGATGTGTTGGATCTCAGCAAGAAGCCAACGGGTGCAGCCACCACGCCCACGCCCACACACACGCCCTCGCTCACGCCGGCACCACCCCTCGTCGGTGCGTCTGCTGTGGTGGCTCCGGCTGCCGATCTGGCCGCCGCCTTGGAGCAACAGCAATTGCTCCTGGCCCAGCAGCAACTCTTTGGCGGCGCCGGTGACGCTGCCTCCCAGTACATGCAGCAGCTGTTCCGCAGCCTGGTGTTCCAGTCCCAGACGCCGGGCTTCTCCTTCTTCCCCTTCATGGCCCCACCGCCGCCGGAGGTGAACCAAGAGAAGCCGCCCCTGGTGAGTCCGCCATCGCGTATGAACCCCCTGCCCGTGGGCGTGGGTGTGCCCGTGCCGCCCGGCGGACCCGTCAAAATGGTCATCAAGAATGGCGTCCTGATGCCCAAGCAGAAGCAGCGTCGCTACCGCACCGAACGTCCCTTTGCCTGCGAGCACTGCTCCGCCCGGTTCACGCTGCGCTCCAACATGGAGCGACATGTGAAGCAGCAGCATCCGCAGTTCTATGCCCAGCGGCAGCGTAGCGGTCATCATGTGATGAGGGGCAGGGGCGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATGGGTCCAACGGGGGGATCCTCCTCCCATCATCATCACAACCACAGCCACAGCCACAACCATGGACATGGACACGGACATGCTCCCATCTCCGAGCAAGTGAAGTACGCCATTTTGGCGCAGCAGTTGAAGGCGCACAAGAACACCGATCTCCTGCAGCAGGCCCTGGCCCATGGCTCCAGCAGTGTGGCCGGGAATCCCCTCCTGCACTTCGGCTACCCACTGGGCCCTGCGCCCGGGGCTCCGCATGTGAACAGCCAGGGAAACGGCCAGACGCCCATGGCCATGGACGATGATGAGCCCAAGCTGATCATCGATGAGGATGAAAATGAGCATGACCACGAGGTGGAGCCGGAGGATGTGGATGACTACGAGGATGAGGAAGATGAGGAGGAGGACGAGCCCGAAGATGAGCCAGAGGTGATTCTAGACGAACCTCATGTCGTCGTGGAAAAGGAGGAAGCACCGGAGGAGGAGGAGGAGCTACCCAAGCCCCTGGAGCAACTTAGCGCCATGTCCAAGACCAGCCCCAGTCACAATGAGGCTGCCCAGAAGATGGCCGAGACCATCCTGGAGCAGGCCATCAAGGCTGGCATCAAGCAGCCATCTGCAACGACTCCTGTGTCCGCGGCAGCAACCTCCGTGCAGGAGGAGAATCCTCCAGCAGCTGTAACCCCACCAGCTGCCATGCAGGAGCCCAGCAGTAATCCCAGCAGCCTGAAGACCATGATAGCCCAGGCCGAGTCTGTGGGCAAGTCGCTGAAGGAGGTGGCCAGTTCGCCATTCAAGGACGAGTCCCAGGACCTGGTGCCGGTGGCCAAGCTGGTGGACAACGCCACCAGCCAGAACATGAGCTTCAACAGCTACTTCCGACCCAGCGACGTGGCCAATCACATGGAACAGAGCGACGAGGAGGGCCTGGTGGCCTCTGGCAGTGCCAGCGAGAGCAACAACAGTGGCACAGAGGATGTCACCAGCTCCAGCTCCAGCAGCGAGCCAAAGAAGAAGTCCGCCTACAGTCTGGCTCCGAATCGCGTCTCCTGCCCCTACTGCCAGCGCATGTTCCCCTGGAGTAGCTCCCTGCGCCGCCACATCCTCACCCATACCGGCCAGAAGCCCTTCAAATGCTCCCATTGCCCGCTGCTGTTCACCACCAAGAGCAACTGCGACCGCCATCTGCTGCGCAAGCATGGCAACGTCGAGTCCGCCATGTCGGTCTATGTGCCCACGGAGGATGTTAGCGAGCCGATACCGGTGCCCAAGTCCGTGGAGGAGATCGAGCTGGAGGAGCAGCGTCGTCGCCAGGAGGCGGAGCGCGAAAGGGAGCGTGAGTTGGAGCGGGAGCGTGAGCTGGAGCGAGAGCGTGAGCTGGAACGGGAGCGTGAGCTGGAGAAGGAAAAGGAGCGGGAACGTCAGCAGCTCATCCATAAGCTGGCCGCCCAGATGAGTGCCGCTGCGGCAGCTGCTGCAGCCGCTGCTGCCTCATGTGCCTCGCCGGGCAATGGATCCTCTGCCGGAGCTGGAGCTGGAGCTGGAGCCGGTCCGGGAGGTGATCTTTCAGCCGGCGGTGATCTGCCCTACAAGTGCCACCTCTGCGAGGGCTCCTTTGCCGAGCGTTTGCAATGCCTGGAGCATATCAAGCAGACGCACGCCCATGAGTTCGCCCTGCTCCTGGCCAAGGGGGCCATCGAGAATGAGTCACTGCACTCCAACGACTCATCGAATACCCAGCAGCAGCAGCAGTTACAACACCAGCACTCGGACGATGAGGCCACCAATGGTTTGGGCCGTGGCAAATATCCGGATTATAGTAATCGCAAGGTCATCTGCGCCTTCTGTGTGCGCCGCTTCTGGTCCACCGAGGATCTGCGGCGTCATATGCGCACTCATTCCGGCGAGAGGCCCTTCCAGTGCGACATCTGCCTGCGCAAGTTCACCCTCAAGCACAGCATGCTGCGTCACATGAAGAAGCACAGTGGACGGGCCCACAATGGGGATACGCCCGGCTCCGATTGTTCCGACGATGAGCAGGCAATGAGCAGCAGTCCGCCGGGGACACCGGCTCCCTCTCCCATGCCGCTACCCTCCAGCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAAGCTGCACGAGCTGCTGGACAAGGCCAATGAGTGGCGGGCAAGTCGGCTGGGCGAGCACAAGGAGAACCTGGGCGAGGCAACGCCCTCGGGAGCAGCGGCAGCCGGTTCGGATCTGATTGGTAACCTTTTGGGGATCAGTGATCAGGGCATACTCAACAAGCTGCTGTCCTCCGCCGATGAGGCGGCCAAGCTTCTGGGCGTGGACAACAAGTAA
Protein Sequence: MERKRRESTTSESSLEHLDLGRTPKKLSGSAGAAQSTSTPHEVAATSRKRKLRXXXXXXXXXXXXXXXXDEDEDEEEARPLNRHKQRRGAQGSSSASASIVVDFSAGDASSLRKKFRLNRSAAASLSESGFVDASSTGHSGYLGNNSSSASTSLAAPSVATTAAGGAAPAASASASSSSTSTSSHSSSGGSSPQGLCLSSGESGIGAGDEHMKYLCPICEVVSATPHEFTNHIRCHNYANGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCRYCHLTFTTNGNMHRHMRTHKQHQTAQSQSQTQSQSQAQSXXXXXXXXXXXXXXXXXXXXXXXXXTLASSMPVRAESYESDASCSTDVSSGNSRSSSFLHNNNNSHKATNNNNNNRGNSKQELEGLEEQEQELELDESKQQLQRRLKTTINNNVIENHADGDLHNEEMEDADADVAMLTSTPDVATLLAGASASGAASRSPSPSPPGSPGLLLSCPACGASDFDNLPALCAHLDARHSDIPAKCRDCEVIFASHRQLQAHCCRGGSGLVVGLPPMLGASSSPLHADEDAEDEEEADHEDDEEMEQKRDDFFHKLYLKGTSGGAGAGGNISHPPSPIKHEPADSKDLADIQSILNMTSSSCTSSFLRNFEQSVNTPSSSQYSLDGRDQEEEAQDAFTSEFRRMKLRGEFPCKLCSAVFPNLRALKGHNRVHLGAVGPAGPFRCNMCPYAVCDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHGKTSREEVKRAIVYHPAEDAGCEDSKSRLGEDLADMSFRSISPTPPPPPPPPPVGESSSSSSSQLKHMLLGEQQHHHSHSHHHHHSVAPAQPPLKIQVKSLDQLVDKKPAAVQQPEKSSSSALDFSMDVLDLSKKPTGAATTPTPTHTPSLTPAPPLVGASAVVAPAADLAAALEQQQLLLAQQQLFGGAGDAASQYMQQLFRSLVFQSQTPGFSFFPFMAPPPPEVNQEKPPLVSPPSRMNPLPVGVGVPVPPGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVMRGRGAXXXXXXXXXXXXXXXXMGPTGGSSSHHHHNHSHSHNHGHGHGHAPISEQVKYAILAQQLKAHKNTDLLQQALAHGSSSVAGNPLLHFGYPLGPAPGAPHVNSQGNGQTPMAMDDDEPKLIIDEDENEHDHEVEPEDVDDYEDEEDEEEDEPEDEPEVILDEPHVVVEKEEAPEEEEELPKPLEQLSAMSKTSPSHNEAAQKMAETILEQAIKAGIKQPSATTPVSAAATSVQEENPPAAVTPPAAMQEPSSNPSSLKTMIAQAESVGKSLKEVASSPFKDESQDLVPVAKLVDNATSQNMSFNSYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVTSSSSSSEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPTEDVSEPIPVPKSVEEIELEEQRRRQEAERERERELERERELERERELERERELEKEKERERQQLIHKLAAQMSAAAAAAAAAAASCASPGNGSSAGAGAGAGAGPGGDLSAGGDLPYKCHLCEGSFAERLQCLEHIKQTHAHEFALLLAKGAIENESLHSNDSSNTQQQQQLQHQHSDDEATNGLGRGKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSGRAHNGDTPGSDCSDDEQAMSSSPPGTPAPSPMPLPSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLHELLDKANEWRASRLGEHKENLGEATPSGAAAAGSDLIGNLLGISDQGILNKLLSSADEAAKLLGVDNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00491706;
90% Identity: -
80% Identity: -