Dins002579.1
Basic Information
- Insect
- Drosophila insularis
- Gene Symbol
- -
- Assembly
- GCA_018903935.1
- Location
- JAEIFP010000517.1:4948993-4950641[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.6 5.9e+03 -2.9 0.1 9 21 127 139 127 140 0.80 2 4 7.6e-15 1.7e-11 43.6 0.0 3 45 316 358 314 358 0.94 3 4 0.019 44 3.9 0.0 28 38 388 398 386 402 0.88 4 4 6.9e-19 1.6e-15 56.6 0.0 2 42 424 464 423 467 0.93
Sequence Information
- Coding Sequence
- ATGAACAATCTAAAATGGATGGGCCATTCGGCCACAATAATGGACATTCAGCGCTCTCTACAAAACGACGACGAATCGTGTGAAGTTATCCTGGCAGCCAAAGATGGCGCGAGTGTGCGCGCCCATCTCTTCATTCTCAGTACATGCAGCGATCTGATGCGAAATCTGTTGGTGGACTTACCACCTGGACAGGAGACAACCATCATTCTGCCCGACATTCGTGGCGATCTGCTAGAGAGTATGCTATCATTTATATACGTTGGCGAGACAAGTCTGCCTTCGGCATCGTTAACTGAATTCGTAGAGGCAATAAATCTTTTGGGCATCAAATCGGCCATTAGTTTTGAGTGTAATCCCACATCGCTTAACAGTACAAATGTGGAGACTGTTGCCGAAGGTTCCATGGCGGTTCAGACGGCAAAATCAATTGGCGACTTGCAAATCGAGCATGCTGAGTTACTAGATGAGGAGGATGAATCTGGGCACCAAGAACATGGCTCTGGCGACACTGGTGGAAACACACTACTCGCCGATGCTCAAGATCAACAGCAACAACCTGCTCAGAGTAGCCGTTCGCTGGAATATCTCGATGTTTACGGCGATCAGCCGAAGATTACCTATTCCATTGAGCACATGAGCGGTACTTCCAGCGGCAATCAGTATATTCTAACAGAAAACACGGGCACGTTCACCATATCGCAATCAGCTGTATCCATTTCAAAATTGGATGCATCCAATGTTGATATGGCCGATGATGATGCCGAAACTGATTGCAAAGACGAAGTCGAGGAACAGGAAACCCAATTAATTGAAGAGGAATATGTCCCATCCGATCCGTTGATAGCAAAACCACGTCGTGTTATTGCTCCGAAGGCAAAACGACCAGCAGCCAAGCAACCAATTAAATACACTGCCCTTAAGAACGACAGTAGAGATGGTATCACCGATGCTCTTGAACTCGCCGCTGATGCTGTTCTCCGTCTCGGACTTAGTTTACAGAAAGCCGCCGATCGGTATGACATATCGAAGACAGTTTTATGGCGCCGCGTCCGCCATAGTCCCGAGTATATGCGCAGTAATCGAGAGAAGCCATCATTAGCGGAGGCCTACGAACGTCTTAAGAACGGTGACTCGCTGAAGAACATTAGCCATGATCTGAGCATACCGATGTCGACATTACACCGTCATAAGATGCGACTGGCAGCCCAGGGTCGCTTGCCTGACTTTGTGGCCTGCCGTCGTCGTGATACCACACCCAAAGATGAGCTACGCGACAAGCTGGCCAAGGCACTGCATGCCTGCACCCATGAGGGTATGTCACAGAATCATGCGGCGAATCTATTCGAGATACCCAAAAGCACGCTTTGGCGTCACCTGCAACGACATACAGCTGAAAAGGAGCGGAAAGTTAAAATGGAGCAGAACGATGATGATGATGATGAAGATCTTCTAACCTAG
- Protein Sequence
- MNNLKWMGHSATIMDIQRSLQNDDESCEVILAAKDGASVRAHLFILSTCSDLMRNLLVDLPPGQETTIILPDIRGDLLESMLSFIYVGETSLPSASLTEFVEAINLLGIKSAISFECNPTSLNSTNVETVAEGSMAVQTAKSIGDLQIEHAELLDEEDESGHQEHGSGDTGGNTLLADAQDQQQQPAQSSRSLEYLDVYGDQPKITYSIEHMSGTSSGNQYILTENTGTFTISQSAVSISKLDASNVDMADDDAETDCKDEVEEQETQLIEEEYVPSDPLIAKPRRVIAPKAKRPAAKQPIKYTALKNDSRDGITDALELAADAVLRLGLSLQKAADRYDISKTVLWRRVRHSPEYMRSNREKPSLAEAYERLKNGDSLKNISHDLSIPMSTLHRHKMRLAAQGRLPDFVACRRRDTTPKDELRDKLAKALHACTHEGMSQNHAANLFEIPKSTLWRHLQRHTAEKERKVKMEQNDDDDDEDLLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00555765;
- 90% Identity
- iTF_00523803;
- 80% Identity
- iTF_00523803;