Dins005471.1
Basic Information
- Insect
- Drosophila insularis
- Gene Symbol
- -
- Assembly
- GCA_018903935.1
- Location
- JAEIFP010001798.1:1227343-1234674[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.6e-12 1.5e-08 34.2 0.0 1 40 395 435 395 438 0.90 2 4 2.5e-13 5.6e-10 38.8 0.1 2 39 450 487 449 490 0.94 3 4 1.5e-16 3.5e-13 49.0 0.0 1 45 504 549 504 549 0.98 4 4 8.6e-20 2e-16 59.5 0.0 1 43 556 599 556 600 0.97
Sequence Information
- Coding Sequence
- ATGTCAACAGCAGCACATGAAGAAAGATTTTTTAATTGGAATTCACAGTGGAAGAGAAGGAGTGGAGTGGGTCTGCTACGTACCGCCGAACAATTGAAAATCAAAGGACTCTGTGAGACAGCTGAAAATGCCGATGATATAAATGATGCGGCAACTGCCACAATAACAGTATCCGAAAATATACAACAGGCAGTTGTTGTGAATGGTGAGCCGGCGTCAAGAAAAACTCGTCCAAAGCGTTCCAAATCACCGGATCAACAGCAGCAACAGGAACATCATCAGCAACAACAGCAGACAATTTTAATTCAGGGACAAAATCAAACATCAATTGTTAGTTTACATCAAACAGTCGATGGAAATTATATACCCGTGAATGCCACTGGGCCGGGTGACGAATCGGACGTGGATAACGATCACGAACTTGATCACGTGCATGAGCACGAACACGAACACGATCACGTGCACGACGAGGAGGAAGACGAAGACGTGCATGAAAATACAAAAAATATGACTAGTTTAGGCATGGGATTGAATGGCGGCCTATTGGGCGTACCCATGGGATTTCTGGACTTTACACCCGAACCACCAGCACCATCAGCCACACCAGTCACTGTAACGGAACATGTCGATATCTCCTGCAATCCAAGCACAGATACGCGAGATCTATCAAATCCCACCGAACCGCTTGACATTGACAATCATTTGGCGCAACAAATCCATCGGCTCGATCAATCTCCCATGCATTCAATAACCCATCATCATACGGGCGATGAGAGTAATTCGAATTTGGTGCAAGTGCAGCATATAAAAAGTGAACATGGTGGACATGTGACGCATGCGGATATTGGTGGCGCAACTGTCATGGAGATTGATCCGAGCCAGATAAAGCATGAACCGGGCATGATAATAACGCCAGAGATTGTCAATATGATGTCGTCCGGTCATATGGATATGTATAATTCTGATACCAGCGAGGATTCCATGATGATTGCCAATGGCTCACCGCACGATCAAAAGGAGCCGCACTATACGAATTTGGATCAGAAACACGGAATTCTTGGCGGCAGCGGAATTTGCGGTCCGGGTGGTGCTGGTGGTGGTGGTGGTAGTGGTGGTAATGGTGGTGGTGTGGCTGGTGGTGTTGCTGGCGAGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCCGCCATATATGGTATACCATCGACCACCCTATGGCAACGTGCTCATCGCCTGGGCATCGAAACGCCCAAGAAGGAGGGCGGCACAAAATCATGGAACGAGGATGCATTACAAAATGCCTTGGAGGCATTACGTGCGGGTCAAATATCCGCCAATAAGGCATCGAAAGCCTTTGGTATACCCTCATCGACATTGTACAAAATTGCCCGACGTGAGGGCATCAGATTGGCAGCACCATTCAATGCCGCACCAACAACATGGACGCCGGAGGATTTGGAACGGGCATTGGTGGCAATTCGAGCGGGTAATACATCGGTGCAAAAAGCAAGTGCCGAATTTGGCATACCAACAGGCACACTTTATGGACGCTGCAAACGCGAGGGGATTGAATTGTCGCGTTCAAATCCTACACCTTGGTCCGAGGATGCCATGAATGAGGCCCTGAACTCAGTTCGTGTTGGCCAAATGTCAATCAATCAGGCGGCCATTCATTATAATCTGCCCTATAGTTCACTCTATGGGCGCTTTAAGCGTGGCAAATACGATGTTGTGGCCAATACCAGCGGAGTTTCGCTATTGAATACCTCAGGCAATACAACTGGAAGCATTGAGATTATTGAGCATAGTCAGGAGAATTCGTTGCATATGTTGCAGCAACAGTTTCCATACAGTCCCTCACCGCATCCACCAACGCCGCAGCATCATAGTACACCGCAACAGCATCACAGCAGCTCCCAGCAAGGACCGCCAACGCCACAGCATATGCAGCAACAGCAGCAGCATGTGGTCCATATGCAGTCGCCACATCAGGGTCATATGGCAACGGGTCATATGCAACAGGATGTGGTTACCTCAAGAGGAGGTGGAGGAGGAGGAGGGCCTGTTGTATTAACGGGTATCAGCACTACACCCTTTGCTAGCATATCAGCATTGGTTAGCGGTGGATCAGCAGGTTCAACAGCACCATCACCTCATCATCCACCACCACCGTCAACATCAGCTTCAACTGGCACTAGCAAACGAAAGAAAGCAGCCAAACAAAAGCGTTGA
- Protein Sequence
- MSTAAHEERFFNWNSQWKRRSGVGLLRTAEQLKIKGLCETAENADDINDAATATITVSENIQQAVVVNGEPASRKTRPKRSKSPDQQQQQEHHQQQQQTILIQGQNQTSIVSLHQTVDGNYIPVNATGPGDESDVDNDHELDHVHEHEHEHDHVHDEEEDEDVHENTKNMTSLGMGLNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDISCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSITHHHTGDESNSNLVQVQHIKSEHGGHVTHADIGGATVMEIDPSQIKHEPGMIITPEIVNMMSSGHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNLDQKHGILGGSGICGPGGAGGGGGSGGNGGGVAGGVAGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRAGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALVAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVSLLNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQQHHSSSQQGPPTPQHMQQQQQHVVHMQSPHQGHMATGHMQQDVVTSRGGGGGGGPVVLTGISTTPFASISALVSGGSAGSTAPSPHHPPPPSTSASTGTSKRKKAAKQKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00604006;
- 90% Identity
- -
- 80% Identity
- -