Dinn003902.1
Basic Information
- Insect
- Drosophila innubila
- Gene Symbol
- -
- Assembly
- GCA_004354385.1
- Location
- NW:28641703-28653114[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.039 2.2 8.5 0.3 1 23 1345 1368 1345 1368 0.94 2 13 7.1 4e+02 1.4 0.2 1 23 1533 1555 1533 1555 0.91 3 13 0.00016 0.009 16.0 2.7 2 23 1558 1579 1558 1579 0.97 4 13 6.2e-05 0.0035 17.3 0.2 3 23 1587 1607 1585 1607 0.98 5 13 5.1e-07 2.9e-05 23.9 4.1 2 23 1614 1635 1613 1635 0.97 6 13 4.8 2.7e+02 1.9 0.4 5 23 1648 1666 1646 1666 0.96 7 13 1.2 68 3.8 5.4 3 23 1673 1694 1671 1694 0.93 8 13 0.13 7.2 6.9 0.2 2 23 1705 1725 1704 1725 0.96 9 13 4.9e-05 0.0028 17.6 0.4 1 19 1731 1749 1731 1753 0.95 10 13 1.4e-05 0.00079 19.3 0.5 1 23 1761 1783 1761 1783 0.98 11 13 9.2e-05 0.0052 16.8 7.6 1 23 1789 1811 1789 1812 0.96 12 13 0.00018 0.01 15.9 5.9 1 23 1817 1839 1817 1839 0.98 13 13 0.025 1.4 9.1 8.2 1 23 1845 1867 1845 1868 0.95
Sequence Information
- Coding Sequence
- ATGGTTGACAGTGTGCAGTGTCCCGTGTGCACCCTGTATCTGCACGCGGGCATGAATCTCTCGGATCACTTGGAGACACATCCCAAGGAGCAAGTCATCAAAGCGCTGGTGCAAATGACAATCGTCGGCAACAATGCAATGGGCGGTGCCCTGGTGGCAGCTGCCCTCTCCACTGCCGGCAGTGGTGCATCAACAGACAGCGCCTCCTCAAcctcctcctccaccaccACATCACCGCCAGATGCTGATGTGAAACCAGCTGtggcagcaaaagcaaaagcaccAGCAGCtgtaacagcagcaacaccagtagcgacgacaacaacaacattaaaatcaACAGCACCCAAGTCTGCATCATTGCTGGTAAatgcaagcaacaacaacaacaccagcagcagcagcagcaacggcaacaataacaaattgagCAATCCACCGATTAAGGCAGTTAAAAGCGCGCCACCCTCGACTGAGGCGTCAGCCACCACATCCACCACACCCACCATAAGCAGCGTGTCCGCTGCCTATCCGCCATCGCTGACATCTGACTATCGCTAcgaccagcaacagcagcaacagcaacatcaacaacaacaacagcaacaggcgacgccaacaacaacgctACATGGCTTTCCACGTGGTGCCACCACAATGCTGGTGATACCACAAGCACCAccacatcagcagcagcataaTTTCCTGGCCACCCAGCAGCCTGGACATTTTGcccatcagcaacaacagcagcagcagcagcagtcggcTATGAAGTACACGTATGCAACAACGTTGCCTCCGCCACCGCCGCCTCTGCAGCTCTTCGCACAGCAGGCGACGACAACGCAGTCGCATCAGAAGCCACCGCCCGCCTATGGCGCCGCAATCAGTCAAATTCGATCTCAGCACAAccaaaacaagcaacaacatcatcagcagcaacaacaacagcaacatataACCGTACAGCATAATGTTAACCTAGCACCACCGAGTGGGAAGCACAGCAAAGCCCATACGGAGATCTTTTTGAatccaccgccaccaccaccgccacagTCCACGATGCCGTCTTCATCGACCTCCTCGTCCGCCTCCGCTTCCGCTTCCGGCTCCACCTCAAGACTGCAACATccacaacagcatcagcatcagcaatcCCTTACAGCCGGCAGCAGCTATGCAGCAGTGAGTTGCTCCAGCTCCACATCGAGTCTGATTGCAGCGACAAACGGACGAGGCATCAGTCGCCAGTCGACCAATTCGCCATTTGGTGCACTGCTCAATGCGGCGGCGCAGGCTGCAAGCTCCTCGCCCGCCTCCTCCAGCGCATCAGTGTTGCGTTACGCCGAATCGCCGGTGGCCCACTATCTGGAGCGTGACAATGGCGACTTTATTTTCCAAGAGACGCCCAAACACATTGTCGAGTGCGTCGAGAAAGATGATGGCGAATTCTCAGTGATTGAGCGCATCTATCAGTCGCCACCCAGCGTGTTGCACATACACGACGATGACGAAGAAGAGGAGGAACATAGCTGGGCAAACAGCGACGATGAGGATCACGTCAAGGCACATAACAATGTGGAGGATGGCGATGATGAGCGTGAGGACAGCCGCAGCAGAGTTGGCCTTAAGACGACAACGAAAAAGTCGCGTAAGATCAAATCGAATGGGAGAATCCACAAACGCTCATTGTCAAAGCACCAGATGATTACGACGGAGGATGAGGAAGAGTTCCTGAGCATAGGCAGCAGTGAAGACGAGGAACAGACTGAGGAGCAGCCGCAGTCATCAGGTGGTGCCCAGGTGGCGTCACCGTCTCCGCCGCAACTTTGCACGGCGCCTTCGACGAGCagtggagctgctgctgcatcttCTGGAAATGTCAATTCCACGTCCAGCGGTACGATTAAGTCCAAAAAGAATCGTGTTACAGTTCTGAGCGATGTGCCGCTCAATATGAATGAGTATCTGGATCTGGTGGGCAACATAGTGGCATCGAGTCGCATTGGCGCAGCTCGTCCATTTGCCGCTGTGGCGCCCATTCCGTTGGTCAAGGTGGAAAAGGAGGAACCGCTCGACGACTATGACAGCGTTCAGACCGAGACTCAGCCCATGGAGCACAAGCCCAGCCTAGAAcatggcagtggcagtggcagtagcagcagcagaagtagcagcgtcagcagcagcaatggaCGCGGCACCACCAGCGTCATTCGCATGGCCAGCACAAGCAGCAGCGCCAATGTTCCGGCGGAGGATCTCACACAGCCGCCGGCCATGAAAGTCGAGGTAGAGCCAACAATGCTGCTGCCACAACGCTTCTCAGCACCAGCGCAACAGCGTGGACCCAAGAAATTAGTCATCAAACCAAAGGCCACAgcaacggcgacgacgacgacgacagcgacgacggcgacgacgacggaAAAGACTGATAACAATGCTGCCAGCAtgagaagcagcaacagcgccGAATCTCTGAGCATATCAAAAGCGTCTGGTGCAGAGCTGGTTCAAATCAAGAGCGAAAATGTAGAgccatccacatccacatcgaGTGGCAGCATCCTGGAGAAGCATCTGACCACCAGTTACACGGGACAGCAAGCAACAACACGCAAACACTCGACAGTCAACGATGACGATGCCCGGGTGCTGCTGGAGTTTGCCAACTCGAAGCAACAACCGCTGGCAGGCACCAGCAGCAATCCCACCACCACATTTGTGGTGAATGCAGCCAGTTTTGCATCGGCGGGATCTGTGTTTGCCAGCAGCATTGAGAAGCATTCAATTAAGCCGGGTGACGAGTACATTCTGCCGGATGATAACAAAGTGGAAATGGATGAAATTGTGATATCCTCCTCGTCTTCCTTTGCTTCCTCCACGCAGCAAGCGCAGCAGCAGTCGCAGTCGtcgcagcagcatcaacaggcAACTCCGGCAGTTCAAGCCACGTTGCAGCAGTCACAGCCGcctaattttaatgatttcaaCTTTCTGTACCACCaaaatacaacagcaacaacaacaacgacgccGACTGCTTCCAATTTTGCACCATTCGGTcttcagcaacagcagcagcagcaacaacaacaacatggctCTAGCGAAGCCACCAATGCAGCGACACTCGCCTCATCCTCCAGTAACTCGTCAGCATTGGATCACGAGTCCTCCATGAATGCCACGTTCCGTGTGGCCAAGCCACAGTCATCACTGAGTGCTTGGTatcagccacagcagcagcaacaacaacaacaaccacagcagcagcagcaacaacaaccacaacaacaacagccacaggCGACAACCTCTGAGAATGTGGAACAGTCGAGCAATTTTATTGCAGCATTGGCAGCCGTCGATTGTTGCAGTGTGGCAATGGACAGTGACGCAAGTGATGCCAAGTACTTGGATCTGGATGCATGTAAGCGGGAACAGTTGAGCAATAGCAGCAGCCATTTGCCCTCTGCCTCGGCATCCACATCGACAACATCGTCTTCATTCGCTGCTGCAGCCACCGAGAGCAGTCTCGTTGGTGGCTTGGGATTAAACATTCGCACGGATGAGAAGATGCCCGCAAAGGGTGAAATATCCGAGCAGGAGAGCAACTGCGACATTGAGAACTCCTGGAGTCAATCGATGTATGGAGACATATCACAGCGGTACTTTAGAAATCAGTTCGCGGATGGCTACAATCAACAGCTAACCGATTGGCGTCAGGACTATTATCCTGCGCAGGATCTCAGTGGTcagcaacagcaccagcagcagcagcgtgaGCACAAACGatttgatttcaatgcgGTCGCCTCCGATTACGCGCAGCCGGGTGAGCTGGACGCCTCCTCGAGCTCTGCCAGAAGCAATCAATTGCTGGATGTGCAGCCCACTACGTCCACGTCCACGTCGTCGGCTTTGCTGGCTGGCCCACCAATTGCCTCGACATCGCGAGCTGCCGCCGAAGCGGAAGCAGTCGCTGCCGCATTGCAACGCAAACCCGCCCGTCGCAAAATCTACAAGTGTCCACACTGCGTGGCCATCTTTGAGAAGCTAAAAGATCGCAATGCACACATGATTGGAGAGCACAACTACGTGCGCCAGAATCGGCGACTCATCTGTACGCAGGCGGTGGTCAATGCCGCCTTGCTAGCACAGCCGCAGgctcaacagcagcagcaacaacagcagcagcagcagcaacagttgttgctgcaggcAGGTGGAAGCATTAATGAGACGCTGCATGAAGATTCCAAGGATGGCATTGTTAAGATCAAACAGGAGCACTGTCAAGACAAGCCAGATTCATCGGAGCAACTGCTTGATCATTTGGAATTGCCGGATGTAAAAGATGCAGACTTACTAGACGTTAATGGTGAGAATGGACGTGATGCGGACGTGAAACCATCAACCAATATGACTGATCTAAAGCCGACTATTATGCCTTTGGCTATGACCACACCAGCTGCCAAATTGGCGGCGATTTATCGCATGCTTATTACCTATAATGAATCGAAGCTTGGGCAGGAACATCACAGCCTCAGCGAGCTGGAGCAAAAGGCGATGGAGAAATCCATATTTCTGTGCTACGTCTGTCGCACCGATTTCCCCTCTGTGAAACTGTACGATGCACATCTGACCGAACATCCCGCCGAGTGCTTCACCTGTGGCAAGAAATTTTATCGCTGGAAAAACTTTTCACTACATCTGAAACGTCATCTGGGCTGGAAGGAGTTCGGTTGCTATGTCTGCGATAAGAAGTTCGTGGTGCGCAGTGCCCTCGTCGAGCATATGCGGATGCACACTGGCCAGACTCCCTTGAAGTGTAAGATATGCGGCAAAAAGTTCAAGCGTTACTCCAATTTGACGCAGCATCGAAAGCGACACACCAAAATGACGGTGCGGAAGAAGGAGTACGTGTGTCACTGTGGCGAGGTGTTGCCCTCGAAGGCGCGTTTCCTGTGGCACAAGGAAACGCACGATTTGAAGCCCAAGTGTTGTCCATATTGCTGCGATCGTTTTGTGCACGCCAATTCACTGCGCCGACACATCCGGCTGGCGCACTCGGACAAATTCGACTATGCTGAGCCCATGGAATGCCCCATGTGCAAGCAGATCTTTGCCAAAACGTCCATCAAGGCGCATATGGCCACACACTCGACGGATCCTCAGTACGATTGCGCCATTTGCAACAAGAGCTTCTCCACAAAATGGAATCTCAAGATTCATTCGTGGGTGCACGCCAATCGCACCGCCAAACCGTTCAAGTGCGAATATTGCCCCAAGGCTTTTGTACGCGAGTTGGACTTTAAGAATCACATGAATGCGCATAAGCAGATAAAGCCCTACACCTGCGAGTACTGTGGTTGCAAGTTCATACGCAAGTACAACTACATGCGGCATCGGCGGGAGCATCATGGCAACAAGAAGTTCACCTGCGATCAGTGCGACAAATCTTTTCATCGCCACTATTATCTAATCGAACATCGTCGTATTCACACTGGCGAACGACCTTTTCACTGCACCATCTGTGGCAAAAGCTCGACCACGAAGACCAATCACAACAAGCATCTGAAGATACATCATTCGCGGGATCCCTTCACCGTGGAGGTCTAA
- Protein Sequence
- MVDSVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIVGNNAMGGALVAAALSTAGSGASTDSASSTSSSTTTSPPDADVKPAVAAKAKAPAAVTAATPVATTTTTLKSTAPKSASLLVNASNNNNTSSSSSNGNNNKLSNPPIKAVKSAPPSTEASATTSTTPTISSVSAAYPPSLTSDYRYDQQQQQQQHQQQQQQQATPTTTLHGFPRGATTMLVIPQAPPHQQQHNFLATQQPGHFAHQQQQQQQQQSAMKYTYATTLPPPPPPLQLFAQQATTTQSHQKPPPAYGAAISQIRSQHNQNKQQHHQQQQQQQHITVQHNVNLAPPSGKHSKAHTEIFLNPPPPPPPQSTMPSSSTSSSASASASGSTSRLQHPQQHQHQQSLTAGSSYAAVSCSSSTSSLIAATNGRGISRQSTNSPFGALLNAAAQAASSSPASSSASVLRYAESPVAHYLERDNGDFIFQETPKHIVECVEKDDGEFSVIERIYQSPPSVLHIHDDDEEEEEHSWANSDDEDHVKAHNNVEDGDDEREDSRSRVGLKTTTKKSRKIKSNGRIHKRSLSKHQMITTEDEEEFLSIGSSEDEEQTEEQPQSSGGAQVASPSPPQLCTAPSTSSGAAAASSGNVNSTSSGTIKSKKNRVTVLSDVPLNMNEYLDLVGNIVASSRIGAARPFAAVAPIPLVKVEKEEPLDDYDSVQTETQPMEHKPSLEHGSGSGSSSSRSSSVSSSNGRGTTSVIRMASTSSSANVPAEDLTQPPAMKVEVEPTMLLPQRFSAPAQQRGPKKLVIKPKATATATTTTTATTATTTEKTDNNAASMRSSNSAESLSISKASGAELVQIKSENVEPSTSTSSGSILEKHLTTSYTGQQATTRKHSTVNDDDARVLLEFANSKQQPLAGTSSNPTTTFVVNAASFASAGSVFASSIEKHSIKPGDEYILPDDNKVEMDEIVISSSSSFASSTQQAQQQSQSSQQHQQATPAVQATLQQSQPPNFNDFNFLYHQNTTATTTTTPTASNFAPFGLQQQQQQQQQQHGSSEATNAATLASSSSNSSALDHESSMNATFRVAKPQSSLSAWYQPQQQQQQQQPQQQQQQQPQQQQPQATTSENVEQSSNFIAALAAVDCCSVAMDSDASDAKYLDLDACKREQLSNSSSHLPSASASTSTTSSSFAAAATESSLVGGLGLNIRTDEKMPAKGEISEQESNCDIENSWSQSMYGDISQRYFRNQFADGYNQQLTDWRQDYYPAQDLSGQQQHQQQQREHKRFDFNAVASDYAQPGELDASSSSARSNQLLDVQPTTSTSTSSALLAGPPIASTSRAAAEAEAVAAALQRKPARRKIYKCPHCVAIFEKLKDRNAHMIGEHNYVRQNRRLICTQAVVNAALLAQPQAQQQQQQQQQQQQQLLLQAGGSINETLHEDSKDGIVKIKQEHCQDKPDSSEQLLDHLELPDVKDADLLDVNGENGRDADVKPSTNMTDLKPTIMPLAMTTPAAKLAAIYRMLITYNESKLGQEHHSLSELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMTVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTDPQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHMNAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKKFTCDQCDKSFHRHYYLIEHRRIHTGERPFHCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00537699;
- 90% Identity
- -
- 80% Identity
- -