Dinn002497.1
Basic Information
- Insect
- Drosophila innubila
- Gene Symbol
- -
- Assembly
- GCA_004354385.1
- Location
- NW:22310038-22312186[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.3e-16 2.8e-13 48.9 0.0 2 45 370 413 369 413 0.95 2 3 0.019 42 3.5 0.0 27 37 442 452 439 457 0.89 3 3 7.6e-21 1.7e-17 62.4 0.0 2 42 479 519 478 521 0.96
Sequence Information
- Coding Sequence
- ATGAATAACCTAAAATGGATGGGTCACTCGTCCACAATTATGGATATCCAGCGCGTTCTCCTCAACCAGCAAAGCAGCAACGAAAGCTGCGAGGTATTGCTAGTGGCCAAAGATGGTATCAGTGTCCGTGCACATCTATTCGTGCTCAGCACGTGCAGCGATCTAATGCGTAATCTGCTGGTCGATTTACCCGTCGGCCAGGAGGCAACAGTTATCCTGCCCGACATTCGTGGCGAGCTGCTGGAGAGCATGTTATCGTTTATTTACATGGGAGAAACCAGCTTATCATCTGCCCTGCTCACCGAGTTTCTCGAAGCAATCAATCTCTTGGGCATTAAATCGGCAATAAGCTTTGAAACGAATCCCACAGCGATGACCACCACAAATGTGGTCACTGGAGCAATGGCTGTGGAGGCAGCCAAGTCCATTAGTGGCTTGCACATTGCGAATACAGCACTtatggaggaggaggaggaggaagaggatgGCAACGTGGTCGTCGGCAAACTGGAAGTAGGCAATTCCGTACTCACTGACCATCCGCAACAGAGCCAGCAGCAGGATGGCAGATCCTTGGAATTCCTCGATGTGTATACGGATCAGCCAAAGATAACATATTCCATTGAACACATGGGTGGCACATCCAGTGGCAATCAGTACATATTAACGGAGAACACGGGCACATTTACCATCACACAATCCGCATCCTCAGTGACCAAATTGGGAGGCACTGTGGTTGACCATGTCACAGGTAGTGAGTTGGCGGTGGATGATGGGGAGGCTGATGTTATAGACGACCATGAGGAATCCGAGTCACATTTAATTGAAGAGGACTATGTTCCAACTGCTGGTCCTTTAATAGAGATGGGTGCAGATGCGGATGCAGATGTTGATATGACTGAGGATGTAATGCACGAGGAAGATGCTGgcgaagaggaggaggaagaggaatTACTGGATGTGAAGCCACGTAAATCGCAGCTAGACATGAAAATCCTGCGGACAAAGGTACAGCCACGTTCAACGACCTCAAAGGCTTCCAAGAAGACAATGACCAAACAGCATCAACAATATGCGGAACTCAAAAAGGAGATCAAAGACGACATCAACGATGCCCTGGAACTGGCAGCAGACGCAGTGCTTCACGAGGGTCTTAGCCTACAAAAGGCTGCCGATCGTTACGACATATCGAAGACCGTACTGTGGCGACGTGTCCGTTCCAATCCTGCCTACATGAGAATCAAACGCGAGAAGCCCTCACTCTCGGAGGCGTATGAGCGCCTAAAGAACGGTGACTCCTTGAAGAGCATTAGTCAAGATCTGAGCATACCCATGTCCACATTGCACAGACATAAGGTGCGACTGGCGGCCCAGGGTCGTTTGCCCGAATTCGTTGCCTGTAGGAGACGGGACAGCACTCCAAAGGACGAGCTGCGGGACAAGCTGGCCAAGGCGGTACATGCCTGTGTCAATGGAGGCATGTCCCAGAATCATGCAGCGAATCTCTTCGAAATACCCAAGAGCACACTCTGGCGACATCTGCAGCGTCGGGTCACAGAGGCGGAGCGAAAGGTCAaagaggagcaggaggaggaagaTGAAGAAGACACTCTCAACTAG
- Protein Sequence
- MNNLKWMGHSSTIMDIQRVLLNQQSSNESCEVLLVAKDGISVRAHLFVLSTCSDLMRNLLVDLPVGQEATVILPDIRGELLESMLSFIYMGETSLSSALLTEFLEAINLLGIKSAISFETNPTAMTTTNVVTGAMAVEAAKSISGLHIANTALMEEEEEEEDGNVVVGKLEVGNSVLTDHPQQSQQQDGRSLEFLDVYTDQPKITYSIEHMGGTSSGNQYILTENTGTFTITQSASSVTKLGGTVVDHVTGSELAVDDGEADVIDDHEESESHLIEEDYVPTAGPLIEMGADADADVDMTEDVMHEEDAGEEEEEEELLDVKPRKSQLDMKILRTKVQPRSTTSKASKKTMTKQHQQYAELKKEIKDDINDALELAADAVLHEGLSLQKAADRYDISKTVLWRRVRSNPAYMRIKREKPSLSEAYERLKNGDSLKSISQDLSIPMSTLHRHKVRLAAQGRLPEFVACRRRDSTPKDELRDKLAKAVHACVNGGMSQNHAANLFEIPKSTLWRHLQRRVTEAERKVKEEQEEEDEEDTLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00610763;
- 90% Identity
- iTF_00510457;
- 80% Identity
- iTF_00523062;