Basic Information

Insect: Drosophila infuscata
Gene Symbol: -
Assembly: GCA_035042205.1
Location: JAWNLR010000915.1:2173586-2177127[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 3.9e-05 0.0028 18.1 5.3 1 23 173 196 173 196 0.97

2 16 0.0019 0.14 12.8 3.9 1 23 245 268 245 268 0.96

3 16 0.00086 0.063 13.9 2.8 1 23 334 357 334 357 0.94

4 16 0.0087 0.63 10.7 0.4 2 23 409 430 408 430 0.96

5 16 3.1 2.2e+02 2.7 1.1 1 20 543 562 543 564 0.85

6 16 0.021 1.5 9.6 0.6 1 23 573 595 573 595 0.94

7 16 0.00029 0.021 15.4 2.1 1 23 602 624 602 625 0.95

8 16 0.00047 0.034 14.7 1.4 2 23 633 654 632 654 0.96

9 16 0.024 1.7 9.4 0.1 3 20 682 699 680 704 0.89

10 16 0.12 8.6 7.2 0.9 1 23 742 765 742 765 0.95

11 16 0.097 7 7.4 2.5 1 22 772 793 772 793 0.96

12 16 0.00059 0.043 14.4 1.2 1 23 802 825 802 825 0.98

13 16 1.7e-05 0.0012 19.3 0.5 1 23 846 869 846 869 0.97

14 16 0.1 7.3 7.4 0.2 1 23 879 901 879 901 0.94

15 16 2.5e-05 0.0018 18.7 3.3 1 23 907 929 907 929 0.99

16 16 5.4e-05 0.0039 17.7 0.9 1 23 935 957 935 957 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	3.9e-05	0.0028	18.1	5.3	1	23	173	196	173	196	0.97
2	16	0.0019	0.14	12.8	3.9	1	23	245	268	245	268	0.96
3	16	0.00086	0.063	13.9	2.8	1	23	334	357	334	357	0.94
4	16	0.0087	0.63	10.7	0.4	2	23	409	430	408	430	0.96
5	16	3.1	2.2e+02	2.7	1.1	1	20	543	562	543	564	0.85
6	16	0.021	1.5	9.6	0.6	1	23	573	595	573	595	0.94
7	16	0.00029	0.021	15.4	2.1	1	23	602	624	602	625	0.95
8	16	0.00047	0.034	14.7	1.4	2	23	633	654	632	654	0.96
9	16	0.024	1.7	9.4	0.1	3	20	682	699	680	704	0.89
10	16	0.12	8.6	7.2	0.9	1	23	742	765	742	765	0.95
11	16	0.097	7	7.4	2.5	1	22	772	793	772	793	0.96
12	16	0.00059	0.043	14.4	1.2	1	23	802	825	802	825	0.98
13	16	1.7e-05	0.0012	19.3	0.5	1	23	846	869	846	869	0.97
14	16	0.1	7.3	7.4	0.2	1	23	879	901	879	901	0.94
15	16	2.5e-05	0.0018	18.7	3.3	1	23	907	929	907	929	0.99
16	16	5.4e-05	0.0039	17.7	0.9	1	23	935	957	935	957	0.98

Sequence Information

Coding Sequence: ATGACAAGAACGTGTAGAATCTGTGGTGGAGCAGATGGACGCTTCTGGATCGAGACGCCAGTTGATAAATACGCTGAGAAAACCTTCAATCACTTGCTGCTGGAGCTAACAAAACTCGAGGTCGCTGTGGATCAAGCTAATAAGCTGCCGCCATGGATCTGCCGCAACTGTGCGCACAGATTAGAGAATGCATACGATTTTGTGCTGCAGGCGAGGGAAACGCACGAGCTTTGGCTGCACAAACTGACAACAGAATCTCTATCGGAGGACACCGAAACTGGGACGTTGGAGTGCCTACGAGAGACACCAATTCAATTGCTAGAGATTGAGGGCGttacaattaaaatggaaGAGGCAACCGAACCAGTCGTGCCCCAAACAGATTCAGTCAGCTCGATTGATCCGCTAATTAAAAAGAGCCGAGAGTATGATGCCAGCGATGATGactctgatgatgatgatgatgacatgCCGCTCCAACAGCGCCGgattgcacacacaaaactgcCGACGATGCACAAGTGCAATAAGTGCGACAAAGCCTTCAAATATATAACGAATCTCTTCAGGCACAAGCGACGAGATCACAGTCCAGAGCAAAGCCAAACCAAAGAACAGCCAGCAGTGGAGAGTGGAAAGACTTATGACGTGGAACCGTTCCTAAACGATCTAATAAAGAGCTCCATTGCAGCAACCGGCAGCAGCGAAGCAGACGAATTGGCGGATGACTATTACAAGTGTGATCAATGCGACAAATCCTACAAGTACATAATGCTTCTGATCAGGCACAAGCACAAGACGCACGCTTCAATCCAGTGTCCAACTGAGCCCAGACCAATTAGAAGAAGCTGCTCGAGTGCAGAGCAAACTAATACTAAACCAGGATCCCCACCTCAGCGCTCGAAACCGACAAGCACAGATTCCCTGGTGCACAGCATTATCAAAGAGATCAACTTACCCGATGAGGATGATGCAGACAGTTCCAGTGCCGACAATTACTACAAGTGCGACCAGTGCGACAAGTCGTACAAATACATCGTGAGTCTCATCAAGCACAAGCACAACGAGCACAAGGAGTACAGGGATTCCGATGAGGACGAAGATGAGGCAAAGTCCTCCAGATATGTAGTAGATGCCACTGCCATGTCGAAGCCCTCCCGCATTGATCGCCGCGTCAAGGGCTTCGATTTGAATCGGTGCCGGCCGAACGGTTCCAAGGAAATTCAGTGCATGATCTGTCTGCGCAGATTCATTAAGTTACGCGAGCTGCGCGATCACCTGAAAGCCCATCCCAAAGACTTTACATTCGATGCCCATGGCGAGCCGATTGAGCGCATTGCCGAGGGATTCTATAAAACAGCCGTGGAGTCCACAGTTGCGGGCCTGAAGCGACGCATCTTTAAAGATCTCAAGGTGGGCATGCTCGGACGCTACTATTCCATAACAAATGAGGCACGCTACGAGATGAATCTGGACAGCTCGGACACGGACAGCGACGGCGAAGCGGATGTTGTGCAGCGACATTCGTATGCCTGCGAACTGTGCGACTCCTCCGATGCCGTCTGGCCACGCAAGTATCAATTGCACGAGCATCACCGGCAGCGACATACCTGGCTGGAGGCGCCGCACGTTTGTCAGCGCTGTGACTCCCGCTTCCTTAGCGCCCAGCTGCTTGAGCATCATACGCTCAAGCTGTGCCAGAACACCCTGAAGCGCTTCATGTGCGACAAATGTCCGCAGCGCTTCTTCTGGCGACGCAATCTACGTGCGCATCTTGTCGAGCACAAAAACAAGcaGGAGACGTATCCGTGTGATCAGTGCTCGCGCAGTTTTCAGGACAAGAGCGCTGTGACGAAGCACAAGCTGATGCACCACGATGTCCACAACGAGCTGTTGCCCTGCCGCTGGTGCACGCGCACCTTCTATCGGCCGGCGCTGTTGCACAAGCATGTGCAGCGTCACGGCTTCAGTGGAGAGGATCTGCCGCTGGCAGAGACACTGCTGGCGGATGCCGCCAAGCCATCCGGTACGAAGACGATTAACTGCAAGCTGTGCGACATGCAGTTCATTAGCATTGGCGATCTGCGGCGGCACAACTCGATACAGGCGCACGGTGAGCACGTGTCCAACTATATGATAAGCACCGAGGAGGGGTTCGAGCTGCAGCTGGACGAAACGGACGAGAGTGATGAGGAGCCCACGAGTACTGCTGCCAGCCGATCTTACAGGTGCGATCTGTGTGAGATGAGCTTCCTGCGAAGGCGCGACATGAGCGAACATCAGTATTCGCTGCACACCTTCGACAAGCTGCCACATTCCTGTGAGCATTGCATTTACAAGACAGTCGATAAGTCCATGCTGGAGCACCATCTGCGCACACAGTGTCTTAACGAGGAGAAGAAATTCAAGTGCTCTCGTTGCGGCTACAAATTCATGTGGCGCGAAAATCTGGAGCAGCATATGAGCACACTGCATCCTAAGTCATCATCTAGTCAGACGGCCGTTTCGGCGACAAAGCGGAGCAGACGTTTCCGATACCAGTGTCCACACTGCTGGCGCTCGTTTGTGGTGCAACCCAGCCTGGACAAGCACATTCGGGACATGCATGTGGCGAAAAAGAATCCCGGCAAGAAGTATCTCTGCTCGCTGTGCGGCCTGGAGTCGCTGACCCCGAATAAGCTCAGCATACACATGCGGCGTCACAACGGCGAGAAGCCATTCAAATGTGATCTCTGCGACATGTCCTTCACTGTTCATTACGAACTGAAGGTCCATCGACGCAAGCATACCGGCGAGCGACCCTATCAGTGCACATTCTGTGCCAAGGATTTCGCCCGGCCGGATAAGCTAAGACGGCATGTTTACATGCATAGCGTTAAACGTTAA
Protein Sequence: MTRTCRICGGADGRFWIETPVDKYAEKTFNHLLLELTKLEVAVDQANKLPPWICRNCAHRLENAYDFVLQARETHELWLHKLTTESLSEDTETGTLECLRETPIQLLEIEGVTIKMEEATEPVVPQTDSVSSIDPLIKKSREYDASDDDSDDDDDDMPLQQRRIAHTKLPTMHKCNKCDKAFKYITNLFRHKRRDHSPEQSQTKEQPAVESGKTYDVEPFLNDLIKSSIAATGSSEADELADDYYKCDQCDKSYKYIMLLIRHKHKTHASIQCPTEPRPIRRSCSSAEQTNTKPGSPPQRSKPTSTDSLVHSIIKEINLPDEDDADSSSADNYYKCDQCDKSYKYIVSLIKHKHNEHKEYRDSDEDEDEAKSSRYVVDATAMSKPSRIDRRVKGFDLNRCRPNGSKEIQCMICLRRFIKLRELRDHLKAHPKDFTFDAHGEPIERIAEGFYKTAVESTVAGLKRRIFKDLKVGMLGRYYSITNEARYEMNLDSSDTDSDGEADVVQRHSYACELCDSSDAVWPRKYQLHEHHRQRHTWLEAPHVCQRCDSRFLSAQLLEHHTLKLCQNTLKRFMCDKCPQRFFWRRNLRAHLVEHKNKQETYPCDQCSRSFQDKSAVTKHKLMHHDVHNELLPCRWCTRTFYRPALLHKHVQRHGFSGEDLPLAETLLADAAKPSGTKTINCKLCDMQFISIGDLRRHNSIQAHGEHVSNYMISTEEGFELQLDETDESDEEPTSTAASRSYRCDLCEMSFLRRRDMSEHQYSLHTFDKLPHSCEHCIYKTVDKSMLEHHLRTQCLNEEKKFKCSRCGYKFMWRENLEQHMSTLHPKSSSSQTAVSATKRSRRFRYQCPHCWRSFVVQPSLDKHIRDMHVAKKNPGKKYLCSLCGLESLTPNKLSIHMRRHNGEKPFKCDLCDMSFTVHYELKVHRRKHTGERPYQCTFCAKDFARPDKLRRHVYMHSVKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00567692;
90% Identity: iTF_00570569;
80% Identity: -