Basic Information

Insect: Drosophila incognita
Gene Symbol: -
Assembly: GCA_035042225.1
Location: JAWNLQ010000711.1:868053-874817[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.6e-05 0.0017 18.8 2.1 1 23 253 275 253 275 0.97

2 18 8.6e-06 0.00056 20.3 0.4 1 23 281 303 281 303 0.97

3 18 0.0013 0.083 13.4 0.9 1 23 309 331 309 331 0.95

4 18 1.8e-05 0.0012 19.2 3.1 1 23 337 359 337 359 0.97

5 18 4.1e-05 0.0027 18.1 4.7 1 23 365 387 365 387 0.99

6 18 7.5e-05 0.0049 17.3 5.7 1 23 393 415 393 415 0.97

7 18 3.7e-07 2.4e-05 24.6 4.3 1 23 421 443 421 443 0.98

8 18 1.3e-07 8.7e-06 26.0 2.4 1 23 449 471 449 471 0.97

9 18 7.7e-05 0.0051 17.3 6.7 1 23 478 500 478 500 0.97

10 18 0.00013 0.0088 16.5 6.5 1 23 506 528 506 528 0.98

11 18 1.2e-05 0.00079 19.8 4.5 1 23 534 556 534 556 0.98

12 18 8.7e-06 0.00057 20.3 8.1 1 23 562 584 562 584 0.98

13 18 7.1e-06 0.00046 20.5 7.6 1 23 590 612 590 612 0.97

14 18 7.9e-07 5.2e-05 23.5 7.7 1 23 618 640 618 640 0.98

15 18 0.00025 0.016 15.7 9.5 1 23 646 669 646 669 0.95

16 18 8.8e-05 0.0057 17.1 0.9 1 23 675 697 675 697 0.98

17 18 0.00096 0.063 13.8 3.4 1 23 707 729 707 729 0.97

18 18 1.1e-05 0.00072 19.9 1.6 1 23 735 758 735 758 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.6e-05	0.0017	18.8	2.1	1	23	253	275	253	275	0.97
2	18	8.6e-06	0.00056	20.3	0.4	1	23	281	303	281	303	0.97
3	18	0.0013	0.083	13.4	0.9	1	23	309	331	309	331	0.95
4	18	1.8e-05	0.0012	19.2	3.1	1	23	337	359	337	359	0.97
5	18	4.1e-05	0.0027	18.1	4.7	1	23	365	387	365	387	0.99
6	18	7.5e-05	0.0049	17.3	5.7	1	23	393	415	393	415	0.97
7	18	3.7e-07	2.4e-05	24.6	4.3	1	23	421	443	421	443	0.98
8	18	1.3e-07	8.7e-06	26.0	2.4	1	23	449	471	449	471	0.97
9	18	7.7e-05	0.0051	17.3	6.7	1	23	478	500	478	500	0.97
10	18	0.00013	0.0088	16.5	6.5	1	23	506	528	506	528	0.98
11	18	1.2e-05	0.00079	19.8	4.5	1	23	534	556	534	556	0.98
12	18	8.7e-06	0.00057	20.3	8.1	1	23	562	584	562	584	0.98
13	18	7.1e-06	0.00046	20.5	7.6	1	23	590	612	590	612	0.97
14	18	7.9e-07	5.2e-05	23.5	7.7	1	23	618	640	618	640	0.98
15	18	0.00025	0.016	15.7	9.5	1	23	646	669	646	669	0.95
16	18	8.8e-05	0.0057	17.1	0.9	1	23	675	697	675	697	0.98
17	18	0.00096	0.063	13.8	3.4	1	23	707	729	707	729	0.97
18	18	1.1e-05	0.00072	19.9	1.6	1	23	735	758	735	758	0.96

Sequence Information

Coding Sequence: ATGCAGCACGTGAGCGCTGCCAGTTCGGCACCTTCGGTGGTTTCAGCACCGGTGGTGACCACTGGCGGTGGCACCACCATCACCTTGGGCGGACCGCCGTCATTGTCCGGTGTCAAATCGGCGGAATCATCGCATAAAGAGGACGGCGGCAAGCAGCCGCCACACGGCATTGAAATGTATAAAGTGAACATTGAGGATATATCACAGTTATTTACGTATCACGAGGTCTTTGGCAAAATCCACGGCGATGTGGTTAATCATGTGGCGGCGGTTCACGGCAGCCAATTGCCACCGCCGCAACTGCCACCGCCGCCCCCCTTACCGCCACAGACGACGCATTCGGCaagcgcagctgcagcagcagcggcggcgtcCACAAATAATGCagcggttgctgctgtaaTGGCCTCGgccaatgcagcagcagcggctgcagcagccgcatcagcagcggcatcagcacaacagcaacaacagcaacaacaacagcaacaacagcaacaacaacagcaacaacagcagcaacaacagcaacaacaacagccagcgACAAGCACAAATGCTGGAAGCCAGCAGGGCAGCGCCACGGTGACAACGACCAGCTCGGGCAGCAACGGGGGTGGGAACGGGGGCAACAActcaacgacaacgacggGTGAGTTGCTAATGCCGAAAATGGAGGGAGGCATCCATGGCGTTGATGGTCAGTCGAGCGTTGCGTTGGCGCCGGATGGCACGCCCATTGCGACTGGTACGCATGTGTGCGACATTTGTGGCAAGATGTTCCAGTTTCGCTATCAGCTGATTGTGCACCGCCGCTACCATAGCGAGCGCAAGCCGTTCATGTGTCAGGTGTGCGGTCAGGGTTTTACCACATCGCAGGATTTGACCCGTCATGGCAAGATCCACATTGGCGGTCCCATGTTCACGTGCATTGTATGCTTCAATGTGTTTGCCAATAATACGAGTCTGGAGCGCCATATGAAACGGCATTCAACGGACAAGCCATTCGCCTGCACCATTTGCCAAAAGACTTTCGCACGCAAAGAGCATCTGGACAATCATTTTCGTTCGCATACGGGCGAAACGCCGTTCCGTTGCCAGTACTGCGCCAAGACGTTTACGCGCAAGGAGCACATGGTCAATCATGTGCGCAAACACACGGGTGAGACGCCACATCGTTGCGATATTTGTAAGAAGTCCTTCACGCGCAAGGAACACTATGTTAACCACTACATGTGGCACACTGgTCAAACACCGCATCAATGCGATGTCTGCGGCAAGAAATACACGCGCAAGGAGCACCTAGCCAACCATATGCGCTCCCACACCAACGAGACGCCGTTCCGTTGCGAAATCTGCGGCAAGAGCTTTAGTCGCAAGGAGCACTTCACCAATCACATACTCTGGCATACAGCAGGTGAGACGCCGCATCGGTGCGACTTCTGCTCCAAGACGTTTACGCGCAAGGAGCATTTGTTAAATCACGTGCGCCAGCACACGGGAGAGTCGCCGCATCGCTGCTCCTACTGCATGAAGACGTTCACGCGCAAGGAGCATCTGGTGAATCATATACGCCAGCACACGGGTGAGACACCGTTCAAGTGCACGTACTGCACGAAAGCGTTCACACGCAAAGATCACATGGTTAATCATGTACGGCAACATACAGGCGAATCGCCGCACAAGTGCACATATTGCACCAAGACGTTTACGCGCAAGGAGCACCTCACCAATCATGTGCGACAGCATACGGGCGATTCGCCGCATCGCTGCTCCTACTGCAAGAAGACCTTCACCCGCAAGGAGCACCTGACGAATCATGTGCGCCTGCACACGGGGGACTCGCCGCACAAGTGCGAATACTGTCAGAAGACGTTTACGCGCAAGGAGCATCTCAATAATCATATGCGCCAGCACTCCAGCGACAATCCCCATTGTTGCAATGTCTGCAACAAGCCCTTCACACGCAAGGAGCATCTGATCAATCATATGTCACGCTGCCACACCGGCGATCGTCCCTTCACCTGCGAGACTTGCGGCAAATCCTTCCCACTCAAGGGCAATTTGCTGTTCCATCAGCGCAGCCACACCAAGGGGCAAGAGTGCGAGCGTCCATTCGCTTGCGAGAAGTGCCCCAAGAATTTCATATGCAAAGGTCACTTGGTCTCGCACATGCGCTCCCATTCGGGCGAGAAACCGCACGCGTGCACACTGTGCAGCAAGGCGTTCGTCGAGCGCGGCAATTTGAAGCGCCACATGAAGATGAATCACCCGGATGCTATGATGCCGCCACCACCCgtgcatccgcatccgcaaaTACCGGCTGGTGTGCTGACCCAGGTCAAGCAGGAAGTGAAACCGATCATAATTCCCCATCActcggcgacgacgacgatgcaCACCATACAGCAGATAACAGCAGGCGCCGCAGCGGCGGGTGCCGGGGCCGTCCAGTTAGCGCCGGGCCTGGTGCCGCTGGTCACCAGCTCGCTCATCTCGCACAATGCGCAGCAGtcgcagaagcagcagcaggcggcggcagcagttgCCGCCCAACAgcaggcggcagcagcagccgctgcacaGCAACAGGCGGCCGCTGCGGCGGCAGcccagcagcaggcggcggcggcagcagcgcaccagcagcatcagcaacaggtggccgcacaacagcagcaacaacagcagcagcagcaggctgcCGTCGCtgcacatcagcagcagcaacagcagctgcagcagcaacagttgctccaATTGTCCATACAGCAGGCGGCCcaccatcatcagcagcatcagcagcagcagcaacagcagcagcagcagcagcatcatcaacagcagcaacagtcgcatcCGCAGGCaccgccacagcagcaacaacaacagcagccgccgccacAGGTGCCGATCGCATTGATAAGTGATCCGAGTGCGCTGGCACGTGCCGccatgcagctgcagcatctgcCCACAAATGTGGAACAGCATCCGGTGGTTTACTAA
Protein Sequence: MQHVSAASSAPSVVSAPVVTTGGGTTITLGGPPSLSGVKSAESSHKEDGGKQPPHGIEMYKVNIEDISQLFTYHEVFGKIHGDVVNHVAAVHGSQLPPPQLPPPPPLPPQTTHSASAAAAAAAASTNNAAVAAVMASANAAAAAAAAASAAASAQQQQQQQQQQQQQQQQQQQQQQQQQQQPATSTNAGSQQGSATVTTTSSGSNGGGNGGNNSTTTTGELLMPKMEGGIHGVDGQSSVALAPDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTAGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQECERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAMMPPPPVHPHPQIPAGVLTQVKQEVKPIIIPHHSATTTMHTIQQITAGAAAAGAGAVQLAPGLVPLVTSSLISHNAQQSQKQQQAAAAVAAQQQAAAAAAAQQQAAAAAAAQQQAAAAAAHQQHQQQVAAQQQQQQQQQQAAVAAHQQQQQQLQQQQLLQLSIQQAAHHHQQHQQQQQQQQQQQHHQQQQQSHPQAPPQQQQQQQPPPQVPIALISDPSALARAAMQLQHLPTNVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00560429;
90% Identity: iTF_00560429;
80% Identity: -