Dhyd010893.1
Basic Information
- Insect
- Drosophila hydei
- Gene Symbol
- Ssb-c31a
- Assembly
- GCA_003285905.2
- Location
- NW:1583262-1583847[+]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.3e-27 6.9e-23 79.4 0.3 1 51 78 128 78 129 0.96
Sequence Information
- Coding Sequence
- ATGCCAACTCAGTTGACGCAAATTATTTGCGCCAAATTTTTCACCAAAAAGGAATTGAGTTCTCagattgaaataaaaatgccaaaaatcagGAAGACAAAAAAAAGCTCCTCAtccgacagcgacagcgggCCCGATGATCGTAATCCACCGCCAAGCAAAAAGTCAAAGGAGAGCGCTGctgaaaaatcaaataagaatGATAGTGGAGATGGTAATGGAGCCACCACATGGACTCTAGAGGGCATGCGTCAGGTGCGCATCAATGAGTTTCGTGGCCGGAAAATGGTTGATATACGCGAGCACTATGAGAAGGATGGGAAAGTCATGCCGGGCAAGAAGGGTATTTCACTGTCGGCTTCGCAGTGGAAAAAATTACTAGCAGTAGCGGACGATGTTAGTCGCGCTCTTGAGGAATGA
- Protein Sequence
- MPTQLTQIICAKFFTKKELSSQIEIKMPKIRKTKKSSSSDSDSGPDDRNPPPSKKSKESAAEKSNKNDSGDGNGATTWTLEGMRQVRINEFRGRKMVDIREHYEKDGKVMPGKKGISLSASQWKKLLAVADDVSRALEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00546658; iTF_00599590; iTF_00551591; iTF_00516265; iTF_00473067; iTF_00544495; iTF_00549555; iTF_00554387; iTF_00512724; iTF_00540372; iTF_00493653; iTF_00532374; iTF_00509818; iTF_00545242; iTF_00479486; iTF_00502528; iTF_01325666; iTF_01321924; iTF_01324903; iTF_01321197; iTF_01324115; iTF_01323380; iTF_01327894; iTF_01320471; iTF_01326400; iTF_00805187; iTF_00478729; iTF_00568982; iTF_00470876; iTF_01356138; iTF_00522963; iTF_00582259; iTF_00803603; iTF_00506871; iTF_00575590; iTF_00528810; iTF_00538231; iTF_00572602;
- 90% Identity
- iTF_00559491;
- 80% Identity
- -