Basic Information

Gene Symbol
dl
Assembly
GCA_003285905.2
Location
NW:393183-402376[+]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 3 9.6e+03 -4.1 4.1 113 134 28 49 17 60 0.43
2 4 2.7e-74 8.8e-71 236.8 0.0 1 169 64 234 64 234 0.99
3 4 3 9.6e+03 -4.1 0.0 63 77 477 492 467 500 0.77
4 4 4 1.3e+04 -4.6 4.1 106 129 630 653 622 670 0.50

Sequence Information

Coding Sequence
ATGTTTCCAAATCAAAACAATGTGGGCGCTGCGGGTGCAGCAGGCGATGCCCAGCAGCTCAACTACAATGgcctacagcagcagcagcagcagcagcagcagcaacagcagcagcagcaacagcaacaacagcagcaacaaactcAACAATTGTCACAGTCCACGAAGAATGTGCGAAAGAAACCGTATGTGAAGATAACGGAGCAGCCCGCCGGCAAAGCATTGCGTTTTCGCTATGAATGTGAGGGCCGCTCGGCTGGCTCCATACCCGGCGTCAACTCGACGCCCGAGAACAAAACCTATCCAACCATCGAGATTGTCGGCTACAAGGGACGCGCCGTAGTCGTTGTGTCCTGTGTCACCAAGGATACGCCATATCGTCCACATCCGCATAATCTGGTAGGCAAGGAGGGCTGCAAGAAGGGCGTCTGCACCCTGGAGATCAGCAGCGAGACGATGCGAGCCGTGTTCAGCAATTTGGGCATTCAGTGTGTCAAGAAGAAGGACATCGAGGCGGCGCTAAAGGCGCGCGAAGAGATTCGCGTGGATCCCTTCAAGACTGgattctcgcatcgctttcaGCCATCGAGCATTGATTTGAACTCGGTGCGTTTGTGCTTTCAAGTATTTATGGAGAGCGAGCAGAAGGGACGCTTCACTTCGCCTCTGCCGCCCGTCGTCTCCGAGCCGATCTTCGATAAGAAGGCCATGTCCGATCTAGTTATATGCCGGCTGTGCAGCTGTTCGGCCAGTGTGCTGGGCAACACGCAAATCATATTGCTGTGCGAGAAGGTGGCCAAAGAGGATATCACGGTGCGTTTCTTCGAGGAGAAGAACGGTCAGACGGTGTGGGAGGCTTTAGGTGATTTTCAGCACACGGACGTGCACAAGCAGACTGCCATTACGTTTAAGACGCCGCGATATCATACGCTTGAAATAACGGAACCCGCCAAGGTTTTCATACAGCTGCGTCGACCCTCGGATGGCGTTACCAGCGAGGCTCTACCCTTTGAATACGTGCCATTGGATTCAGGTAGGCATACGTTCTGGAATCTTCATCGGCATCTTAAGAGGAAGCCCGATGAAGACATCTTTCAGCAAATTCTAACGATCGATGCGGTCGATCGATGCTCGGCCAAGCGCGAGACCCCCACGATTGAGGTAATTGATCTAAATACGCCCACCTTGGAGCAGCCAGAacctcagctgcagcaggtagcagtggcggtggcggtggcggaggcagaggcggcagcggcagcggcagccgagGATCTCACAGATCAGACACCATTAGACATGGAGGCAGCAGATGCTGAAGCTGAGGCGGAGCGACTGCGCACTGAATTGGAAATCGATACGATCATTGATGAAAAGGTGCGCGAAttggagcagctggagctggagcagcaactggagcagcaGTTGGCAGCGCCAGAGCCGCATCAACTAACGGCCAACGACAAATGCAACGAGTGGATGAAGTCCAATGAGCTGCTACAACAGCCTCACGAGCCGAGTCCAGATCCAGTTGATGGCGAAGTCGAGGCCGACGACAGCGATGCCACAGCCGAAACTCAGGTGGCCGCCACGGATGAGGACAAGACGCTCAACGAGCTGCTCGAACAGGTGGCCGAGTTGGATGAGATCTACACAGACTTCGTAATGCAGCGGGACACTTACAATAATACACTGCAGAACGAGCTGCAGAGCATGGACAGGCCGCCTTTGCAGGTGGAGGATAGCTTCGATGATGCAGCCACCTATACAAGTCTGCAGATCGCCTTCAAGAATCCAGTAATCATACCCATGGATGATATCATGCCCCCGACACCACCCATGTCGCAGTGCGCGCCAGAAGATGCGCAGCACTACGATGCAGTAGAGGTGAactcacagcaacaacagcagcagcagcagcagcagcagcaacatcagcaacagcaacaacagttgcaacacCAGCAAGAGTTACTTAAAGAGTACGAGATGGAAAAACGTGCACAGGAGCAGCTTGAGCTGGAGGCAGCTCTGATGCTTGCAGCTGCTGAGGAGGAGAagttgccgccgctgccgcccaAACGTCTGCGCAAACAGGACAGCAATGCTGAGAATCGCTCGATCGATGCGAACAGCGATGCGGCGTCCCCAGCTAAGGATAAGCCACGCCTGCCGCCTCCAATCATACACCCACGCGTCGTCGATTTGCCCGCAGCGCCTACAAAGAAGCTGCCACAACCACCGGAGACAAAGCCCAAGCTCAAGCCGAAGCCCACAAAGAATCCGAATTTCAATACGCTGCCCAGACAAAAGAAGCCTGGCTTCTTCTCCAAGCTGTTCGCGAGGCGTAAGAGCAAGCCGGAGCTAATGGATCGCAGCAATGAGAATTGTTCGAGACTCGGCTCGAAGCCGGCCAGTGCCACAGCCAGCAGTGAGCCCAGCTTGGATAATCTGAATACTCGAACGGCCAAAAGCAGAGCAACCAATGTGGTGCTGGGTCCATTGAAGTCGGATGGCACTGGTGCCACGGCCACACCTCGGAAAACTGGCAAATCTGGCAAGCCCTGCGGCCGCAGCGTGAGCAGTGTCTCAGGCAAGCGACCCTCGTATCTGAACGCAGATGTGGTGCATATTCCACTGAAAGGCGACAGCTCCAGCAGCTTGCAACAGTCGCCCAATGAGGCCTACTCGAGTGCCAGCACAATAACAGTAGGTGGCCAGCTGGACAGACGCACTGCGTCCGCATTGCAGCTGGCCGAGATACCCATCAGCGAGGGCGGCATGGAGCTGGTGGCCATTGCCGATCGCCAGAGCTTGCACAACTTAGTCAGCTCGATCGAGGCGCACTTCAACGTGAAAATGGACCCCAATTTGGATCTCACGGAAGTCGAACATTTTGCTCTATACACGAGTGTGCCACCCCAAGCGACGGTCAGTGAATTCGACGAGACGTCCGCCTACTATGCATCTGTGGATGCTGGCGAGATTCTAACACCTGACCAGGTGGCCAAGCGACTGGCGGCAGCAAACGGCAATTGA
Protein Sequence
MFPNQNNVGAAGAAGDAQQLNYNGLQQQQQQQQQQQQQQQQQQQQQQTQQLSQSTKNVRKKPYVKITEQPAGKALRFRYECEGRSAGSIPGVNSTPENKTYPTIEIVGYKGRAVVVVSCVTKDTPYRPHPHNLVGKEGCKKGVCTLEISSETMRAVFSNLGIQCVKKKDIEAALKAREEIRVDPFKTGFSHRFQPSSIDLNSVRLCFQVFMESEQKGRFTSPLPPVVSEPIFDKKAMSDLVICRLCSCSASVLGNTQIILLCEKVAKEDITVRFFEEKNGQTVWEALGDFQHTDVHKQTAITFKTPRYHTLEITEPAKVFIQLRRPSDGVTSEALPFEYVPLDSGRHTFWNLHRHLKRKPDEDIFQQILTIDAVDRCSAKRETPTIEVIDLNTPTLEQPEPQLQQVAVAVAVAEAEAAAAAAAEDLTDQTPLDMEAADAEAEAERLRTELEIDTIIDEKVRELEQLELEQQLEQQLAAPEPHQLTANDKCNEWMKSNELLQQPHEPSPDPVDGEVEADDSDATAETQVAATDEDKTLNELLEQVAELDEIYTDFVMQRDTYNNTLQNELQSMDRPPLQVEDSFDDAATYTSLQIAFKNPVIIPMDDIMPPTPPMSQCAPEDAQHYDAVEVNSQQQQQQQQQQQQHQQQQQQLQHQQELLKEYEMEKRAQEQLELEAALMLAAAEEEKLPPLPPKRLRKQDSNAENRSIDANSDAASPAKDKPRLPPPIIHPRVVDLPAAPTKKLPQPPETKPKLKPKPTKNPNFNTLPRQKKPGFFSKLFARRKSKPELMDRSNENCSRLGSKPASATASSEPSLDNLNTRTAKSRATNVVLGPLKSDGTGATATPRKTGKSGKPCGRSVSSVSGKRPSYLNADVVHIPLKGDSSSSLQQSPNEAYSSASTITVGGQLDRRTASALQLAEIPISEGGMELVAIADRQSLHNLVSSIEAHFNVKMDPNLDLTEVEHFALYTSVPPQATVSEFDETSAYYASVDAGEILTPDQVAKRLAAANGN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00530040;
90% Identity
iTF_00476393;
80% Identity
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