Dhyd006211.1
Basic Information
- Insect
- Drosophila hydei
- Gene Symbol
- Bro
- Assembly
- GCA_003285905.2
- Location
- NW:790455-791422[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.94 6.1e+03 -3.8 0.0 146 163 33 50 29 52 0.54 2 2 7.9e-73 5.1e-69 230.7 0.3 1 157 71 220 71 230 0.95
Sequence Information
- Coding Sequence
- ATGCTAAAACGTTTGTCtgttaaaatttcaaaaattaacaaGAATCTTCTTTTGGAAAATTTATTAAGATTGAACGGAACACCTGTCCACAGTATGAATTTGCGCATCGAGCTGTTAAGAGATCAGAAaatgcatcatcatcagcatcaaatGCCGCCCTACGAAGCCATGGGGCTCTACGAACAACCCAAGCCGCGCTTCATATTCAAAATGCCACGGGTTGTGCCGAATCAAAAGTCCAAATACGAGTCGGATGAATTGTTCCGGAGACTGAGCCGGGAGAGCGAGGTGCGCTATACAGGATACCGTGGACGCGCTGTAGATGAGCGTCGTATGCGTTTCGTCACCGACTGTCGCAAGGGCTATGCCGAGCTCTCCTTTGTGCCCACAGGCACCAATCTGCAGCTCTACTTCAATGCCAATCACAATCCCTATGCCCATGAGCAGGAATGCGATTTCGACAAGGAACGGGGCAAGGTTCATTTGCGTTCCAACTTTATAATGAACGGCGTTTGTGTACGTTTCCGTGGCTGGTTGGATCTGGAGCGTTTAGATGGCGTTGCCTGCCTGGATTTCGATGAAGGACGCGCGCTTCAGGAGGATGCACAGCTGGCGGAACAAATCGAGAGCTACAATCAGCGTATGGCCGACTCGAAACGAATGTATACACCACCTCAGGAACCGATGCGACGTGGTCCCGGACCCGGACCCGGACCCGGACTCGGCCCCGGCCCAGTTCCAGGACCTCCAATGGGCTGGTGA
- Protein Sequence
- MLKRLSVKISKINKNLLLENLLRLNGTPVHSMNLRIELLRDQKMHHHQHQMPPYEAMGLYEQPKPRFIFKMPRVVPNQKSKYESDELFRRLSRESEVRYTGYRGRAVDERRMRFVTDCRKGYAELSFVPTGTNLQLYFNANHNPYAHEQECDFDKERGKVHLRSNFIMNGVCVRFRGWLDLERLDGVACLDFDEGRALQEDAQLAEQIESYNQRMADSKRMYTPPQEPMRRGPGPGPGPGLGPGPVPGPPMGW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00582027;
- 90% Identity
- iTF_00532132; iTF_00544230; iTF_00586441; iTF_00572362; iTF_00502283; iTF_00502284; iTF_00509580; iTF_00599343; iTF_00516016; iTF_00554161; iTF_00568017; iTF_00551346; iTF_00559253; iTF_00479254; iTF_00544982; iTF_00573078; iTF_00472825; iTF_00493407; iTF_00540127; iTF_00549312; iTF_00476385; iTF_00546415;
- 80% Identity
- -