Dhis001831.1
Basic Information
- Insect
- Drosophila histrio
- Gene Symbol
- stc
- Assembly
- GCA_958299025.2
- Location
- OY282580.2:16731728-16735412[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 1.4 1.5e+04 -3.6 0.5 15 18 349 352 348 353 0.79 2 16 2 2.1e+04 -4.1 1.6 15 19 376 380 375 380 0.81 3 16 0.056 6.1e+02 0.9 2.0 4 11 409 416 408 417 0.90 4 16 5.8e-07 0.0063 16.8 15.1 1 19 421 438 421 438 0.93 5 16 0.87 9.4e+03 -3.0 1.4 6 10 464 468 463 468 0.90 6 16 8.6e-07 0.0093 16.2 11.6 1 18 474 491 474 492 0.97 7 16 1.7 1.8e+04 -3.9 1.5 7 13 496 502 496 503 0.75 8 16 2e-09 2.2e-05 24.7 12.9 1 19 532 550 532 550 0.98 9 16 1.1 1.2e+04 -3.3 0.5 5 10 580 585 580 585 0.90 10 16 6.8e-05 0.74 10.2 17.3 4 19 598 613 591 613 0.86 11 16 0.14 1.5e+03 -0.4 11.7 1 11 653 663 653 675 0.79 12 16 3.6e-09 3.9e-05 23.8 12.9 1 18 680 697 680 698 0.97 13 16 2 2.2e+04 -4.3 1.2 6 10 727 731 727 731 0.88 14 16 2 2.2e+04 -6.5 8.7 10 18 745 754 734 755 0.76 15 16 5.8e-08 0.00063 20.0 13.7 1 16 791 806 791 816 0.94 16 16 2.6e-07 0.0028 17.9 13.3 1 19 823 842 823 842 0.96
Sequence Information
- Coding Sequence
- ATGGCCGAGtattggcagcaacaacagccgcagccgcagcagcagcagcttctgAATACAAACGGTTATGACggcgctgcagcagcaacagctcgGGATGATTCAActtctgccgctgccgctagtggcagcaacaacaacaactatgtgAATTTTAATCAGTTTATCACGCAACATAATTTGGCCAGCTCCAATGTGGCTTACAGCATTGGTGGTGGTGTCGGCGGCGGCGGAAACGGCGGCGCCTTTGGACTGCtgcccaacaacagcagcagcagcagcacaattCCCTCGAACAACTCCCCTTCCCACTGTGCGGGCAGCCCTTTTTTTGGCTACACCAATGGCGCTGGCGATGGCACAGCAATTAACAACTATGCAGCTTCGACTGCTGCTCCCAATCTATACTCGACTTTTGGCCAAAATCCATTTGCCAGCGCCAGTGGCTTTGATTTTAGCAACTCCAAGCTGCAGGCATCGGCGCCGGAATTTGTGCCGAGCTTTGCCAAGCTCAGTTTGACAGCAGACAGtaagaacaacaatagcaacagcagcaacaacagcagcactgCCAATCAGTCAACCAGCAATCAACaccaaccacaacaacagcagcagccacagcagcagcagcagcagcgactgcCAAAACCTAATGCCACCAACAGTCGTCAACAGCGACGCAATGATTATCGTGAGGATCGAGGCGAACGAAATGAGGATCGTTACGATCGCAAAAAGCCGCAGAAGCAACAACGCTATGACAATCATCGCAGCAATAAGCGACGCGATGATTGGAATCGAAATCGAGATCGAATCAATGGCTATCCGCGTGCCAGCGAGGAACTGGACACGAGCAACAGCAATGACAGCGCACATCCGTCGCCGGAGAAGCAGCCGCAGTCTCAAAACTCGCCTCGACAAAGGGCGCCCGACAACGAGAAGTTGTCGCAGCGGGAGAAACTGATGCGTGACATTGAACAGCGGCGTCTGGAGTGTCTGGTGTGTGTGGAACAGATTAAAGCACATCATGGCACCTGGTCGTGTCAGAATTGCTATCATGTGCTGCATCTCAAGTGCACCATTACGTGGGCGAGCAGCTCTAAGTCTGCGGAGGGTTGGCGTTGTCCCGCCTGCCAGAATGTGTTGCAGGAGTTGCCACGGGAATATCTGTGCTTCTGTGGCAAGCTAAAGAATCCGCCGTTGACGCGCACCGAGTTGGCGCACAGTTGTGGCGAGCTATGTTGTCGTGTCGAGGGTTGCAGTCACGCCTGTACGCTGCTCTGTCATCCGGGTCCTTGTCCGCCCTGCCAGGCGAATGTGAGTCGCAGCTGCGGCTGTGGACGCACCAATAAGTTGATGCAGTGCGCCATGAAGCAGCCGCTGCAGTGTGAATCCGTATGCGATAAGCTGTTGAACTGCAGCGAGCATCGTTGCACGCAGATCTGTCATGCCGGCAAGTGTGAGGCGTGCGGGGAGCATGTGCAGCAGAATTGCCACTGTGGCAAGCAGCAGCGACAGGTGGCGTGCACAAGAGAGAGCCAGGACAAGCGCAGTTATTCGTGCAAGGAATGCTGTGGCAAGCCGCTGCCCTGTGGCAATCACAAGTGCAAGGACTCTTGCCACGCCGGCGCCTGTCGTCCCTGCAAGCTGAGTCCCTCGCAGATCACTAGCTGTCCGTGTGGCAAGCTGCCGGTGGCCATGGAACAGCGCAGCAGCTGCCTGGATGCGGTGCCCACGTGCGAAGGCGTCTGCGGCAAGACGCTGCGCTGCGGCAAGCCGGCGCATCCTCATCAGTGTCCCAGCAAATGCCATCTGGGACAGTGTCCGCCATGCACGAAGCAGACGGCGGTCAAGTGTCGTTGTGGCCACATGGATCAGTTGATTAAGTGTCGACAGCTATCGACACGAGCGGACGATGCACGCTGCAAGCGTCGCTGTACAAAGAAGCGCAGTTGTGGCAAGCACAAGTGCAACGTCGAGTGTTGCATCGATATCGATCACGCCTGTCCGTTGCCCTGCAATCGTACATTGAGCTGCGGTCGCCACAAGTGCGATCAATCCTGTCATCGGGGCAATTGCACTCCCTGCTATCGCAGCAGCTTCGAGGAATTGTATTGCGAGTGCGGCGCCGAGGTCATCTATCCGCCCGTGCCCTGCGGCACCAAGAAGCCACTCTGCAAGCGTCCCTGCTCCCGCACCCACGGCTGCGAGCATGTGCCGCAGCATAACTGCCACGCAGCGGCCACCTGTCCGCCCTGCATGATGTTCACCACGAAGTGGTGCCACGGCAATCACGAGCAGCGCAAAACCATTCCCTGCTCGCAGGCCAGCTTCAGCTGTGGCCTCGCCTGTGGCAAGTCGCTTGCCTGCGGTCGCCACAAGTGCATTCGGCCCTGTCACGAGGGCGACTGCCAGCAGGCGGGCGAACTGTGCCGCCAGAGCTGCACCAAGCCGCGTCTGCTCTGCGGCCACAAGTGTGCGGCTGCCTGCCACGAGGGCGATTGTCCCGAGACGCCGTGCAAGGAGCTGGTCGAGGTGCAGTGCGAGTGTGGCAATCGCAAGCAGAACCGCAGCTGCCAGGAACTGGCCAGAGAGCATAGTCGCATTGCCACCGCCCAGCTGGCCTCTTCCATGGCCGAGATGTCCAGGGGCAACTACATGGAGCTCAGCGAGATTCTGGCGCCCGGCAAGACCAGCAAGTCTAACAAAACGCTGGATTGCAATGAGGAGTGTCGTCTGCTAGAGCGCAATCGTCGCTTGGCCATCGGTTTGCAGTCGCGTAATCCGGACACGCAGTTGAAGTCACTCACCAAGTACTCGGAATTCACACGCGGATTTGCCAAGCGCAATCCGGCATTGACCAAGAGCGTGTATGAAACATTAAGCGACTTGGTCAAGCTGGCCAAGGAGAGCAAGCAAAAGTCGAGAAGTCACTCGTTTCCCACCATGAATCGTGAGAAGCGTCAACTGGTGCACGAGCTGTGCGAAGTGTTTGGCGTGGAGTCTGTTTCCTATGACAAGGAGCCCAATCGCAATGTGGTTGCCACGGCACATAAGGAACGCTGTTGGTTACCCGCCACAAGCATCATGGAGGTTCTGGCCCGCGAATCCGGACAACGACGCGTTCCAGTTCCCAGTAATAATGCCTGGGGTCTCAAAAAGTAG
- Protein Sequence
- MAEYWQQQQPQPQQQQLLNTNGYDGAAAATARDDSTSAAAASGSNNNNYVNFNQFITQHNLASSNVAYSIGGGVGGGGNGGAFGLLPNNSSSSSTIPSNNSPSHCAGSPFFGYTNGAGDGTAINNYAASTAAPNLYSTFGQNPFASASGFDFSNSKLQASAPEFVPSFAKLSLTADSKNNNSNSSNNSSTANQSTSNQHQPQQQQQPQQQQQQRLPKPNATNSRQQRRNDYREDRGERNEDRYDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRASEELDTSNSNDSAHPSPEKQPQSQNSPRQRAPDNEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQELPREYLCFCGKLKNPPLTRTELAHSCGELCCRVEGCSHACTLLCHPGPCPPCQANVSRSCGCGRTNKLMQCAMKQPLQCESVCDKLLNCSEHRCTQICHAGKCEACGEHVQQNCHCGKQQRQVACTRESQDKRSYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPSQITSCPCGKLPVAMEQRSSCLDAVPTCEGVCGKTLRCGKPAHPHQCPSKCHLGQCPPCTKQTAVKCRCGHMDQLIKCRQLSTRADDARCKRRCTKKRSCGKHKCNVECCIDIDHACPLPCNRTLSCGRHKCDQSCHRGNCTPCYRSSFEELYCECGAEVIYPPVPCGTKKPLCKRPCSRTHGCEHVPQHNCHAAATCPPCMMFTTKWCHGNHEQRKTIPCSQASFSCGLACGKSLACGRHKCIRPCHEGDCQQAGELCRQSCTKPRLLCGHKCAAACHEGDCPETPCKELVEVQCECGNRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPGKTSKSNKTLDCNEECRLLERNRRLAIGLQSRNPDTQLKSLTKYSEFTRGFAKRNPALTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWGLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00472738;
- 90% Identity
- -
- 80% Identity
- -