Dhis005006.2
Basic Information
- Insect
- Drosophila histrio
- Gene Symbol
- -
- Assembly
- GCA_958299025.2
- Location
- OY282581.2:13637237-13643624[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.051 4 8.4 0.2 1 23 1317 1340 1317 1340 0.94 2 13 8.3 6.5e+02 1.4 0.2 1 23 1497 1519 1497 1519 0.91 3 13 0.00018 0.015 16.0 2.7 2 23 1522 1543 1522 1543 0.97 4 13 7.1e-05 0.0056 17.3 0.2 3 23 1551 1571 1549 1571 0.98 5 13 5.9e-07 4.7e-05 23.9 4.1 2 23 1578 1599 1577 1599 0.97 6 13 5.3 4.2e+02 2.0 0.4 5 23 1612 1630 1609 1630 0.95 7 13 1.4 1.1e+02 3.8 5.4 3 23 1637 1658 1635 1658 0.93 8 13 0.15 12 6.9 0.2 2 23 1669 1689 1668 1689 0.96 9 13 5.7e-05 0.0045 17.6 0.4 1 19 1695 1713 1695 1717 0.95 10 13 1.6e-05 0.0013 19.4 0.5 1 23 1725 1747 1725 1747 0.98 11 13 0.00011 0.0084 16.8 7.6 1 23 1753 1775 1753 1776 0.96 12 13 0.00027 0.021 15.5 5.2 1 23 1781 1803 1781 1803 0.98 13 13 0.029 2.3 9.1 8.2 1 23 1809 1831 1809 1832 0.95
Sequence Information
- Coding Sequence
- ATGGTTGACAGTGTGCAGTGTCCCGTGTGCACCTTGTACCTGCACGCGGGCATGAATCTCTCTGATCATTTGGAGACACATCCCAAGGAACAAGTCATCAAAGCCCTGGTGCAAATGACAATCGTTGGCAACAATGCAATGGGCGGCGCCCTGGTGGCAGCTGCACTCTCCACTGCCGGCAGTGGTGCATCATCATCGGACGGCGCCTCCTCCCCATCAACGCCGGATACTGATGTAAAAccagctgtggcagcaacagcagcagttgtaactgtggcagcagcagcaacggttGCAGCACCCACTTCACCaccactaacaacaacaacattaaagtCAACAGCACCCAAAGTTGCATCATTGCTGGTGAACGCAactatcaacaacaacagcagcagtagcagtaacagtaacagcaacagcaacagcaacaacagtaacagtaacagtaacaataacaaattgagCAATCCACCGATTAAGGCAGTTAAAAGCGCGCCACCATCGACTGAGGCGTCAGCCACCACATCCAACACACCCACCATAAGCAGCGTGGCCGCTGTCTATCCGCCATCGTTGACATCCGACTATCGCTAtgaacaccagcagcagcagcagcagcaacaacaacaaccgcaacaacaacaagcgactACAACGACAACGCTTCAAGGTTTTCCACGTGGTGCCACCACAATGCTGGTAATTCCACAAgcaccacaacagcagcagcatcatttCCTGTCCACCCAACAACAGTCTGCTCAGTTTACccatcagcagcagccgcagcaacaacaacagcagcagcaaccgtCGACTGTGAAGTTCACATATGCAACAACGTTGCCGCCGCCTCCGCCGCCACTGCAGCTCTTTGCACAGCAGCCGACGACAACGCAGTCGCATCAGAAGCCACCGCCTGCCTATGGCGCCGCCATCAGTCAAATTCGATCTCAGCACAACCAAAACAAGCAACACCCACAACCACAACATGTAACCGTTAACCTTGCACCACCGAGTGGGAAACACAGCAAAGCCCATACGGAGATCTTTCTGAATCCACCGCCTCCGCCACCACCACAGTCCACGATACCGACTTCGTCGacctcctcctcttcctcgtCCTGTTCGTCCCCCTCCTCAAGACTGCAACATCCACAACACCAGCATCAGCAATCCCTTGCAAACGGCAACAGTTATGCAGTAGTAAACTGCTCCAGCTCCTCATCAAACCTGATGACAGCGACAAACGGACGGGCCGGCAATCGACAGTCGACTAATTCGCCATTTGGTGCACTGCTTAATGCGGCGGCACAAGCTGCCAGCTCCTCGCCTGCCTCCTCCAGTGCATCTGTGCTGCGTTACGCAGAATCGCCTGTTGCCCACTATCTGGAGCGGGAGAATGGTGATTTTATTGTCCAAGAGACCCCGAAACATATTGTCGAGTGCGTCGAGAAAGACGATGGCGAATTCTCAGTGATTGAGCGTATCTATCAGTCGCCACCAAGCGTATTGCACATTCACGACGATGACGAAGAAGAGGAGGAACAGAGCTGGGCAAACAGCGACGATGAGGATCACGCCAAGACACATAACAATGTGGAGGATGGTGATGACGAGCGTGAGGACAGCCGCAGCAGAATTGGCGTAAAGACGACAACGAAAAAGGCGCGTAAAATGAAATCTAGTGGGAGAGTGCACAAACGCGCGTCTAAGCAGCAGATGGTAACTACGGAAGATGAGGAGGAGTTCATGAGTGTGGGCAGCAGTGAGAACGAGGAGCAGGCCGAGGAGCAGCCGCAGTCGTCAAATGCTGTGCAGTTGGCGTCGCCGTCCCCTCCACAACTTTGCACGGCGCCTTCAACGAGCAGTGgagtggctgctgctgcggctgcgggCAATGTCAATTCCACTTCCACGTCTATCGGCACCATAAAGTCCAAAAAGAATCGCGTTACTGTGCTGAGCGATGTGCCGCTCAACATGAATGAGTATCTGGATTTGGTGGGCAACATTGTGGCTTCGAGTCGCATTGGTGCCGCTCGTCCGTTTGCCGCCGTGGCTCCCATTCCGTTGGTCAAGGTGGAAAAGGAGGAGCCACTGGACGAGTATGACAGCGCTCAGACCGATTTGCAGTCCATGGAACAGAAGCCCAGCCTAGAGCACGCCAAtggcagtagcagcagcagcagtagtagtagtaacagcagcagcaacggacACGCCACCACTAGCGTCATCCGCATGGCCAGcacaagcagcagcaccaccaaCAATGTTCCGCCCGAGGATCTCACACAGCCGCTGCCCATGAAAGTCGAGGTGGAGCCTACGATGCTGCTGCCACAACGTTTCTCGGCGCCGGCACAGCAGCGTGGACCCAAGAAATTAGTCATTAAACCAAAGGCCACAGCAACGGCTACtgcaacgacgacgatgacgaaaAAGACTGATAACAATGCTGCCAGCATCAGAAGCAGCAACTGCGCCGAATCTCTCAGCATATCAAAAGCGTCGGCAGATCTGGTGCAGATCAAGAGCGAGAACGTTGAGCCGTCTACATCTAGTGGCAGCATTCTGGAGAAGCATCTGACCACCAGCTATGCTGGGCAGCAAGCACGCAAACACTCCACAGTCAACGACGATGATGCGCGTGTGCTGCTTGAGTTCGCCAACTCGAAGCAACTGCCGCTGACGGGCAGCAGTAATCCCACCACATTTGTGGTGAATGCGGCCAGTTTTGCGTCGGCGGGATCCGTGTTTGCCAGCAGCATACAGAAGCCAATCAAGCCGGGTGACGAGTACATTCTGCCTGACGATAACAAAGTGGAAATGGATGAAATTGTGATATCCTCCTCGTCTTCCTTTGCCTCCTCCACgcaacaaccgcagcagcaTACTCAGGCGACTCCGTCTATTCAAGCCACTCATTCGACGTTGCAGCAGGCACAGCCGCCTACCTTCAATGACTTCAACTTTCTGTACCACCAAAGTACAACGACACCAACGGCTTCCAACTTTGCGCCCTTCGGTcttcagcaacagcatcagcaacaaccacaTGCTTCCAGCGAAGCCACCAACGCAGCGACGCACGCCTCGTCCTCCAGTAACTCGTCAGCGTTGGATCAGGACTCCTCCATGAATGCCACGTTCCGTGTGGCCAAGCAGCAGTCATCGCTGAGTGCTTGGTATCAGCCACAGCACCAGCAGACacagcagcaagaacaacagcagcagccacagccaaCAACGTCGCAGAATGTGGAACAGTCGAGCAATTTCATTGCAGCATTGGCAGCCGTCGATTGCTGCAGTGTGGCGATGGACAGTGATGCGAGTGATGCCAAGTACTTGGACCTGGATGCATGCAAACGGGAACAGctgagcaacagcagcagccacttgCCCTCTGCCTCGGCATCCACGTCCACAACATCATCTTCGTTCGCTGCGGCAGCCACAGAAAGCAGCCTCGTCGGCGGTCTGGGATTGAACATTCGCACTGATGAGAAGATGCCCGCGAAGGGTGAAATTTCCGAGCAGGAGAGCAACTGCGACATCGAGAACTCCTGGAGTCAATCGATGTACGGCGACATATCACAGCGTTACTTTAGGAACCAGTTCGCGGATGGTTACAATCAACAGCTGGCCGATTGGCGTCAGGACTATTATCCTGCGCAGGATCTCAGtggtcagcagcagcagcgagaaCAAAAGCGTTTTGACTTTAATGCGGTCGCCTCCGAGTACGCGCAGCCGGGTGAACTGGACGCCTCTTCGAGCTCTGCTAGAAGCAATCAATTGCTGGACGCACAGCCCACCACGTCCACGTCGTCATCGGCTTTGCTGGCTGGTCCACCAATAGCCTCGACATCCAGAGCAGCCGCCGAAGCGGAGGCAGTCGCCGCCGCGTTGCAGCGAAAACCCGCGCGTCGCAAGATCTACAAGTGCCCGCATTGCGTGGCCATCTTCGAGAAGCTAAAGGAGCGCAATGCACATATGATTGGGGAGCACAACTATGTGCGCCAGAATCGACGACTCATCTGTACGCAGGCGTTGGTCAATGCCGCCATTTTGTCACAACCTCAGATttcccaacagcagcagcagttgttgctgcaggCGGGTGAAGGAAGCATTGCTCTGCACGAAGATTCTAAGGATGGCATTGTGAAGATCAAACAGGAGCACTGCCAGGACAAACCCGATTCGTCGGAGCAGCTTCTAGATCATTTGGAGCTGCCGGATGTGAAAGATGCTGGCTTATTGGACGTTAACGGGGAGAACGAGCGCGATGCGGACGTAAAGCCGTCCACCAACGTGACTGATGTGAAGCCGACTATTACGCCTTTGGCTATGACGACACCGGCTGCCAAGTTGGCGGCGATTTATCGCATGCTCATTGCCTATAATGAGTCGAAGCTTGGTCAGGAGCATCACAACCTCAGCGAGCTGGAGCAAAAGGCCATGGAGAAATCTATATTTCTATGCTACGTCTGTCGCACTGATTTCCCCTCCGTAAAGCTCTACGATGCACATCTGACTGAGCATCCTGCCGAGTGCTTCACCTGTGGCAAGAAATTTTATCGCTGGAAAAACTTCTCACTGCATCTAAAGCGTCATCTCGGCTGGAAAGAATTTGGCTGCTATGTCTGCGATAAGAAATTCGTTGTGCGCAGCGCGCTCGTCGAGCATATGCGAATGCATACAGGCCAAACTCCGTTGAAGTGCAAGATATGCGGCAAGAAGTTCAAGCGTTACTCCAACTTGACTCAGCATCGGAAGCGACACACCAAAATGACAGTGCGGAAAAAGGAATATGTGTGTCACTGTGGCGAGGTGTTGCCTTCGAAGGCGCGTTTCCTCTGGCATAAGGAAACGCACGATCTGAAGCCCAAGTGCTGTCCGTACTGTTGCGATCGTTTTGTGCACGCCAATTCACTGCGTCGACACATCCGACTGGCGCATTCAGACAAGTTTGACTACGCCGAGCCGATGGAATGCCCCATGTGCAAGCAGATATTTGCCAAGACATCAATTAAGGCACACATGGCTACGCACTCGACGGATCCGCAGTACGATTGCGCCATCTGCAACAAGAGCTTCTCCACAAAATGGAATCTCAAGATACACTCGTGGGTGCACGCCAATCGCACCGCCAAACCGTTCAAGTGCGAGTATTGCCCCAAGGCCTTTGTCCGCGAGCTGGACTTTAAGAACCACATGAATGCGCACAAGCAGATTAAGCCCTACACCTGCGAATACTGCGGTTGCAAGTTCATACGGAAGTACAACTATATGCGGCATCGGCGGGAGCACCATGGCAACAAGAAGTTCAGCTGCGAACTGTGCGACAAGTCTTTCCATCGGCACTACTATCTGATTGAGCATCGACGCATTCACACTGGCGAACGGCCTTTCCACTGCACCATCTGTGGCAAGAGCTCGACTACGAAGACCAATCACAACAAGCATCTGAAGATACATCATTCGCGCGATCCCTTCACCGTCGAGGTCTAA
- Protein Sequence
- MVDSVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIVGNNAMGGALVAAALSTAGSGASSSDGASSPSTPDTDVKPAVAATAAVVTVAAAATVAAPTSPPLTTTTLKSTAPKVASLLVNATINNNSSSSSNSNSNSNSNNSNSNSNNNKLSNPPIKAVKSAPPSTEASATTSNTPTISSVAAVYPPSLTSDYRYEHQQQQQQQQQQPQQQQATTTTTLQGFPRGATTMLVIPQAPQQQQHHFLSTQQQSAQFTHQQQPQQQQQQQQPSTVKFTYATTLPPPPPPLQLFAQQPTTTQSHQKPPPAYGAAISQIRSQHNQNKQHPQPQHVTVNLAPPSGKHSKAHTEIFLNPPPPPPPQSTIPTSSTSSSSSSCSSPSSRLQHPQHQHQQSLANGNSYAVVNCSSSSSNLMTATNGRAGNRQSTNSPFGALLNAAAQAASSSPASSSASVLRYAESPVAHYLERENGDFIVQETPKHIVECVEKDDGEFSVIERIYQSPPSVLHIHDDDEEEEEQSWANSDDEDHAKTHNNVEDGDDEREDSRSRIGVKTTTKKARKMKSSGRVHKRASKQQMVTTEDEEEFMSVGSSENEEQAEEQPQSSNAVQLASPSPPQLCTAPSTSSGVAAAAAAGNVNSTSTSIGTIKSKKNRVTVLSDVPLNMNEYLDLVGNIVASSRIGAARPFAAVAPIPLVKVEKEEPLDEYDSAQTDLQSMEQKPSLEHANGSSSSSSSSSNSSSNGHATTSVIRMASTSSSTTNNVPPEDLTQPLPMKVEVEPTMLLPQRFSAPAQQRGPKKLVIKPKATATATATTTMTKKTDNNAASIRSSNCAESLSISKASADLVQIKSENVEPSTSSGSILEKHLTTSYAGQQARKHSTVNDDDARVLLEFANSKQLPLTGSSNPTTFVVNAASFASAGSVFASSIQKPIKPGDEYILPDDNKVEMDEIVISSSSSFASSTQQPQQHTQATPSIQATHSTLQQAQPPTFNDFNFLYHQSTTTPTASNFAPFGLQQQHQQQPHASSEATNAATHASSSSNSSALDQDSSMNATFRVAKQQSSLSAWYQPQHQQTQQQEQQQQPQPTTSQNVEQSSNFIAALAAVDCCSVAMDSDASDAKYLDLDACKREQLSNSSSHLPSASASTSTTSSSFAAAATESSLVGGLGLNIRTDEKMPAKGEISEQESNCDIENSWSQSMYGDISQRYFRNQFADGYNQQLADWRQDYYPAQDLSGQQQQREQKRFDFNAVASEYAQPGELDASSSSARSNQLLDAQPTTSTSSSALLAGPPIASTSRAAAEAEAVAAALQRKPARRKIYKCPHCVAIFEKLKERNAHMIGEHNYVRQNRRLICTQALVNAAILSQPQISQQQQQLLLQAGEGSIALHEDSKDGIVKIKQEHCQDKPDSSEQLLDHLELPDVKDAGLLDVNGENERDADVKPSTNVTDVKPTITPLAMTTPAAKLAAIYRMLIAYNESKLGQEHHNLSELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMTVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTDPQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHMNAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKKFSCELCDKSFHRHYYLIEHRRIHTGERPFHCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00537699;
- 90% Identity
- -
- 80% Identity
- -