Dhis009160.1
Basic Information
- Insect
- Drosophila histrio
- Gene Symbol
- Lrrfip1
- Assembly
- GCA_958299025.2
- Location
- OY282582.1:10160597-10160899[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.8e-35 5e-31 108.4 8.3 1 93 3 96 3 97 0.94
Sequence Information
- Coding Sequence
- ATGCAGGCTGAAGCGCGTCTAGCAGCACGTCGTCAAGCGCGTGTTGAAGCTCGCGAGATACGTATGCGAGAGCTTGAGcgacaacaaaaagaacaagagcAAAATGCAGATCGTGCCTTTGATATGCAAAATATCAGTGGCAATGTAATTTTCGATACACATCCTACTACACGTATCACTTACGGTAGTCTTCTAAACTTGACGCGCGCAGCAACATCGCGACGCAGTAGTGAGGATTCATTAGAGGAGGAGGGTCGCAGCTTCCGTGACATCAAATATGAACTAAAAGTAGGTACTCCTTAA
- Protein Sequence
- MQAEARLAARRQARVEAREIRMRELERQQKEQEQNADRAFDMQNISGNVIFDTHPTTRITYGSLLNLTRAATSRRSSEDSLEEEGRSFRDIKYELKVGTP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00575576;
- 90% Identity
- -
- 80% Identity
- -