Dhis018717.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila histrio
Gene Symbol
lov
Assembly
GCA_958299025.2
Location
OY729167.1:16803802-16814210[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.1e-18 2.4e-15 56.2 0.0 1 44 867 910 867 911 0.96

Sequence Information

Coding Sequence
ATGTTAAAGGACGCCGAGGAGCTGATAAAACGCTGCAAACtgacgtcgctgccgctggCGCTGCATATGAACGACTACGGCCGCCAGGTGGCGCCAGCGCCGCTAgcgttgccgctgccgttgccgctgccgctgctaaCGAAGCcgccaacgacgacgacgcagaCGACGACGTCGCCAATGgatcatcagcagcatcatcagcagcatgcgcatcatcatcatcatacaGCATTGCCGCCGCCTTCGCACAGCCACGCCCATCCATCAATGCATGCCACACCGCCCACAACGCCGCCAACGCCACCGCCGTTGCCGCTGAACATGActgccgcagcaacagcgacaacaacgacagcaacaccAACTGCGATGACACACAGTCcacctgccacgcccactggaATTGGGGGTGCCTTAGCGGCACCGCAGGATCATTACAGCCTGCGCTGGAACAACCATCAGAATCACATACTGCGCGCCTTCGACGCCCTGCTGCAGACCAAGACCCTGGTGGATGTGACCCTGGTCTGTGCCGAGACCTCGATCCGTGCCCACAAAATGGTACTGTCCGCCTGCTCGCCGTTCTTCCAACGCGTGTTCGCCGAGACGCCCTGCAAGCATCCCGTCATTGTCCTCAAGGACTTCCGCGGCTGGGTTGTCCAGGCCATTGTGGACTTTATGTATCGGGGTGAGATCAGCGTGCCTCAGCAACGTCTGCAGACTCTCATCCAGGCAGGAGAGTCGCTGCAGGTGCGTGGTCTGGTGGAGAGCTCCGTGCCGGAGCATACGCCTACGCCAGCCGCTTCGCCCGATGACTTCCACCTGCTGGACGCCTCGCTGCTCTCCTCCAGCTACGAGGACGACTCACCCTCGATGGTAAGGGCAGCGGCTGGCAAGCTGATAATGCCCTCTCGATTGTTTGGTAATCCGGCCAGCGGCGCCATGGCGGCGCTCAGTCTGCGGCGTAAGCGGGAGCGGGAGGAGTGCGAACGGGAGCTGGAGAGTGATCAGGAGCTGGGTGGTAGTTCTCCAATGCCAAGACGCAAGCAGGCCCGTCCCAGACGCCGATCCGGCGATGTGCCTCACGACTTTGCGCTCAACAAACCAACGGAAACGGTGGAGACGCTGCAAACTGTGATCAAGCACGAGCTGCGGGAGGAGCAGGAGCCAAGTGAGAAGTGTCCGAGTAGTGAGCGGGACAGTTCCATGTCCCAGGACGAGGCACAACAAGCCAATGAAGCTGAGGCGGAGGAACTGAACAGCGGGGGAACTGAACAGCAGGAGAGAACGGGATTAACCCTTTCCGAGAGCAACAATCAACAACGAGCACAAGAACTCGATGAAGAGGATGACGAAGAGCAAGATCACGATCAAGACCACGATCATGACCGCGATCACGATCACGAGCCAGAGCAGGAGCATGATCAGGAGGAGCAGGAACATGATCACGACATTGAGCACGATCATGAACAGgatgaggacgaggacgaACAGGACATTGAAGAGCTTATACACACGACCAACGAGTTGCGTCGCCAGGCGGCAGTTGCCGCTGCCAATGCAGCTGCCATGTCGCCGTGTCCCAGCGATGGACCCGAGGATCTCTGCACTACCAAGAAGGACAAGGACACGAGCAACAACTCGCATTCCTCGGACGgcgagagcaacaacaataatagcagCAAACTGCAGGACAACAATCAACGCATCATGTTGTCCCTCAAGGACATTAGACAATTGAACGCCAAGCCGAATGCAACATCAACGCCCAACCACACGCCCACCTCCTGTGCACCCGGCAACAATGGCATGATGTCCTTCCACCCGCCAGGCATGCGTCCACCCGGCCTGCCCGACAGTCCGCCCTGCCACATGGAGGCGCTGGAGGCGCAAATGCAtgcagctgccgctgccgctgtggCCGCTGCTGGCGCCGGCGAGCATCCCTTCCACCACATGGAGCATCAGATGGAAATGTCGCtggccgctgccgccgctgcgGCTGCAATGCATCAGCGTGAGCCGCGAGATCCCCGCGAGACGCGGGAGCAGGCGCTGCAGCGGGAGCACAATGCATTTGCTAGCAATCTGTTGGGTCCCATGGGACTGCCACCATTTGGGGCACACAATGGGATGCCGGGAACGGGATGTGCGCCGGGCCAGGCGCCGCACGAGCGACTGGAGGAGAGCATGAATCGGCTGAGCAAGGAATTCGGCAAAGAGTTCGGCAAGGAGTTCGGAAAGGAGTTTGGCAAAGATTTCGGCAAGGATTTTTGCAAGGAATTCGCACCCACGTCACCAATGAGTTTGCCCGGACATTTTAATCCGCCAGACGGACATCCGCATCCGCCATCGCCGCTGCCCTTTCCTGGCATGTCCTCGGCGTTGACGCTAACGCCGCCGCACATGTTTGGTCTGGATTCCCCACTGGGTTTATTTCCCCCCGGCATGGATCCTGGAAAACTCTACAATCCGCTGATGGAAATGAGTGATCCACGCGATATGCCTGGAGGTCCGCCGCCGTTTctcaaaaagaaaaTGCCACGTCCCAAAGGACAACATTCAGCGCCACGCGGCGGTCCGCCACGTTCGTGGACCAACACGGAATTAACGGAGGCACTGCAGCACGTGTGGAACAAGAAGATGACCACGTCTCAGGCATCCCGCATCTTTGGCATACCCTACAACTCGCTGCTGATGTATGTGCGGGGTAAATACGGCAAGAGCTTGAAGCTGGAGCAATTGCGCAAGGATTGCATCAGTGGTCCGCCGATTGAGATGCTGCAGATGGGCATCAGTGGCGGCAACGGCAGCTCCAAGAGCGAGAAGAAGGAGCGCAAGGAGAAGGACAAGGACAAGAATGGTTCGGGCGGCAGCTCCAATTCGGGTGGCAACAATGGTTCCTCTGGCAATCCAAATGCCAGCGGTGGTCCCCCTCAATTGCCACATCCCAGCGAGTTGGGACCACTCGGTCCCCTCGATCTGGAGCTGGGCCTGCCGCTGGGTCCGCCAGCTGGTCCACGTAGTGGCAGCTCTGAGCCGGATCTACTTGGCGGACCCAATGCACTCTTCAATCCCTTCAATCCGCAAGGCTTCTATCCGGACTTTGCCGGCGGTTTTCCGGGTCTGCCGCTCAGCATGTTGAATCTGTTGCCGCCGGCGGAACGTCACCACGCCGCGGTGGCCATGCACCACCTGGGCGTCAGCATGGACGAGGACTGCAAGTCGGTGGGCTCCAAGCAATCCTCCTCGCTGGACGATGACTTTGCAGCCGCCGGTCTGCCGCTCGCCTTGGAGCAGCGTCGCCACAGCGAGATGGCCAGCAATGGAGCGACGTTGGCCCAGGCGAATGGAGCGGGGCAGGATTGA
Protein Sequence
MLKDAEELIKRCKLTSLPLALHMNDYGRQVAPAPLALPLPLPLPLLTKPPTTTTQTTTSPMDHQQHHQQHAHHHHHTALPPPSHSHAHPSMHATPPTTPPTPPPLPLNMTAAATATTTTATPTAMTHSPPATPTGIGGALAAPQDHYSLRWNNHQNHILRAFDALLQTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQQRLQTLIQAGESLQVRGLVESSVPEHTPTPAASPDDFHLLDASLLSSSYEDDSPSMVRAAAGKLIMPSRLFGNPASGAMAALSLRRKREREECERELESDQELGGSSPMPRRKQARPRRRSGDVPHDFALNKPTETVETLQTVIKHELREEQEPSEKCPSSERDSSMSQDEAQQANEAEAEELNSGGTEQQERTGLTLSESNNQQRAQELDEEDDEEQDHDQDHDHDRDHDHEPEQEHDQEEQEHDHDIEHDHEQDEDEDEQDIEELIHTTNELRRQAAVAAANAAAMSPCPSDGPEDLCTTKKDKDTSNNSHSSDGESNNNNSSKLQDNNQRIMLSLKDIRQLNAKPNATSTPNHTPTSCAPGNNGMMSFHPPGMRPPGLPDSPPCHMEALEAQMHAAAAAAVAAAGAGEHPFHHMEHQMEMSLAAAAAAAAMHQREPRDPRETREQALQREHNAFASNLLGPMGLPPFGAHNGMPGTGCAPGQAPHERLEESMNRLSKEFGKEFGKEFGKEFGKDFGKDFCKEFAPTSPMSLPGHFNPPDGHPHPPSPLPFPGMSSALTLTPPHMFGLDSPLGLFPPGMDPGKLYNPLMEMSDPRDMPGGPPPFLKKKMPRPKGQHSAPRGGPPRSWTNTELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPIEMLQMGISGGNGSSKSEKKERKEKDKDKNGSGGSSNSGGNNGSSGNPNASGGPPQLPHPSELGPLGPLDLELGLPLGPPAGPRSGSSEPDLLGGPNALFNPFNPQGFYPDFAGGFPGLPLSMLNLLPPAERHHAAVAMHHLGVSMDEDCKSVGSKQSSSLDDDFAAAGLPLALEQRRHSEMASNGATLAQANGAGQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00534666;
90% Identity
iTF_00519249;
80% Identity
iTF_00519249;