Dhel014131.1
Basic Information
- Insect
- Drosophila helvetica
- Gene Symbol
- -
- Assembly
- GCA_963969585.1
- Location
- OZ018403.1:7277131-7281123[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 8.4e-05 0.008 17.0 0.1 1 23 182 205 182 205 0.96 2 13 0.0018 0.17 12.8 3.1 2 23 254 276 250 276 0.90 3 13 0.0075 0.72 10.9 0.3 1 23 365 388 365 388 0.93 4 13 0.34 32 5.7 5.4 2 23 437 459 436 460 0.95 5 13 0.0014 0.14 13.1 0.6 1 23 528 551 528 551 0.88 6 13 0.0007 0.067 14.1 3.3 2 23 602 624 602 624 0.96 7 13 0.00057 0.054 14.4 0.0 1 23 709 732 709 732 0.95 8 13 0.00071 0.068 14.1 0.2 1 23 793 816 793 816 0.93 9 13 0.0012 0.11 13.4 2.2 2 23 866 888 865 888 0.97 10 13 0.0033 0.32 12.0 3.8 1 23 982 1004 982 1005 0.94 11 13 0.054 5.1 8.2 1.5 1 21 1057 1077 1057 1078 0.95 12 13 0.14 14 6.8 0.1 3 15 1120 1132 1119 1143 0.62 13 13 0.27 26 6.0 2.6 1 23 1160 1184 1160 1184 0.69
Sequence Information
- Coding Sequence
- ATGGAAGGAATGGACCTGTGGACGTCCATGTTCTCGGCAGACTTCGAGGAGGGCGAGGAGGAGATCGAGCAATACGCGAATGAAAACGGCCTGGACAGCAATCCTGCCGGCGACAGTGACGACATTCTGCCCGAGGGCGATggcgacgacgaggacgagggcGAAGAaaacgaggaggaggacgacgccgatgatgatgatgataataaTGATGCGGAGGACGATGAGGAGGAGGGGACTGGCCGTGACAGTGGAAAAATAAAAGAACCCGATCTAGACGATGATGCCATATTTGATTTCGATCTGGAGCCGATTGTAAGCATTGGGGAGCCACAGTCAGCTCCGTTGCTGACGCCTCCGGGACCACTTGGCGCCCCTGTGCGTCCCATGCATCGCCACTCACTGCCTAGGACCGGCCAGGGTCAGGGTCAGGGCAGGCCCAAGGAGGTGCGTCTATCGGGCGTGCTCACGCGGCCCACCACCTCGCAGATCAATGCAACCGATGCGAACGGGATTCCCATCAATTATGAGCTGGGCGTCATCTACATCTGTCCCGCGTGCGGAGCGGAATTCCGGCAGCAGGATCTCTGGAAACGCCACATGAACCAGATGCACCAGTTCAACACGCGCCGCGGCCTCAACTTCATGGCCCTGGACAAGCTGTATCATCGGTGCCTGGAGTGCAACAAGCGCATCGCCATGCACAGCCGGGAGAACCTGCTGAAGCACAAGTTCACCCATCTGCCGTTCAGGTGCACCAAGTGCTACATCTGCAAACGGGAGTACAAATACAGACAAGACCTGATGGTCCACCTGAGAATGGTCCATTGCGACGAGGTGGTGGCCATGATGCGGGAGGGCTTCAACTTGGCGGGACGCAAGACGCGGGTGCGGGAGCCGCGCACAGAGCAAATGCAGCGCAAGGAACCCTTCCCGGAGGAGGATGACGAGCGAAACGATCTTCTCGAGCCGGAGACTGAGACTATGCCGGCCATGCTCGAAGAGGAAGCTCCGCAGAGGCGTAGGAAGAAGCGCTACCAGGGAGGTCCCTCCGGCGATGGAGGTGCGGATCTTTGCGAGGATTACATCCACTACATGTGCCCCGATTGCGGCACTGAGTGCGACACCTACGCCCAGTGGAGTCAGCACATTGAGTTTGTCCACGACTACGTCAGTCGCAGGGGGCTCAACTTCATCAGCGTGGACATGCAGATGCAGTGCCTCGAATGCAAGAAGATTGTCATCCCCAACACCATTAAGACGCTGCGGGCGCACAAGTTCACGCATCTGTCGCAGCCCGAGTGGCTTCGCTGCAAGCTGTGCTACAAGGGCTACACGGAGCACCACGAGCTGGTCAGTCATCTGCTGAAGCAACACCACCTGGAATCGCTGATGCCGGAGGAGTCGGAGCCGGATCCATCACCCGTCAAAAGGACAGACGGCGTTGGCGGTGGCGGAGGCGACGACTGGGAGGACAATGGAAACGGAAGCGTCTTCGATGACGTGTCACCGCACTTTGAGGATGTGCCGCGGCGGGGAGGCCGTATCGGAAGCGATGACATTTACGAGCCGCACATCGACTACCTGTGTCCGCAGTGCGGCAAGGAGTTCATCGAGAAGAAGCACTGGCGCACCCATGTGGTGCAGGTGCACGGCATGAACGATGTGACGAAGCTCAACTTTGCGATAATCAACGATCGCCAGCTGAAGTGCACGGAGTGCGCCAAGATCATAACGAATGCCTACGGCATCCAGAACGCACAGCAGCACCGGATCACGCACCTGCCATTCAAGGCGTACGCCAGGTGCCGCAAGTGCCACAAGTCCTACACGGACCGCAAGGGTCTGGTCAAGCATCTGGCCACCTACCATCGTGTGGGCTATGTGCCGCGCAAAAGCCTCAAAAGAGCCGGACGAGCGACCTGCTCGTATGCGTCGCCCAAGCAGCAGCGCAAACAGATTGTGACCTTGGGCAAAGAGACCTACGAGATCATCTTCCTGGACGAAGAGCAGACGCACTCCAGTGTCGACGAGGAGAACGACTTCGGGGAGCAGATGCAGATGGCGGATGAGGAGGACTTGCCCACTGTCAGTGCTGGCGTGCCGCCGCCCAATCCGAATCGCTACAAGTGCGTGGAATGCGGGACGCTCTTCCCCACCCAAGTGGCTCTCAAGCTGCACATCAGCGAGGCACATACGTTCCGGGATCCCCCTCCGTACGGGCCATCCAAGAAATTGGACATATCCCAGGGCAAAGAGGAGGCGCCCAAGAAGAGGAGACTAGGCGCgggatcagcagcagcattagtaccatcatcatcatcattggcGCCCACAAGCAGCCCGTCGTTGGGCACCGTAGAGCAGAACTACATATTTCTGTGCCCCTCGTGCGGCGAGGAGTACAAGACGCAGTTCGAGTGGCGCCGCCACATCAACGAGGCCCACAACTTCGACAAGCGACAGTTTCTGAATATGCGGCAGCTGGACAAGTACCGATACCAGTGCACCCAGTGCAACGACATTGTGTGCAACTCCAAGTTGAAGGGCCTGCAGGACCACCACTTCCGCCACCTGCCCTTCCGCCTGTACCTCAAATGCCTCGTGTGCGGCACCTGCTACAACCACAAGCCCAACATTGCCGCCCATCTGAGGACGCGACACAACATCTACGAGCGGGAAACGCCCTGGCGGGAACTCCACACCAAGCCGCAATACTCTTATGTTCAGTCCAAGGAAAAGGACAGGGATACGGCCGTCAAGAGCAGGCCGCAATCACCCACGCAAGCAGTTGCAGTTgtcccctcctcctcctcgggcTCCGGTAGCAGCAGTCGCCCGCTGTGGCCGCAGTCGGAGAAGCGGCCCACACGGCCGGCCGGACTCAACACCCTGGAGGACAGCATCTCGTACCACAATGCAGTGGACATGGACTTCATCACCTACTACTGCcccaagtgcaacaagaacttCGACTCGCACGCCTTCTGGCGCAAGCACATCGTGGAGCATCACAACTTCAACAGCCGCGAGGGCCTGAACTTCCGGCAGATCGACATCCACCACTACTTGTGCCTGGAGTGCTACAAGCGTGTGACCGTCACCCACACCAAGGGCGCCATCGGGCAGCTCCAGTCGCACAAGTTCCGCCACCTGCCCTACCGCTCCTTCAAGTGTCTCACCTGCAACGGAGAGTTTGTGCGCAAGCAGATGTTCTTCAAGCATCTCAATCGGGACACCAATCGGTGCGACAACAAGCCCAGCGCCGAGGAGGTGTTTGATGACGAGGAGCAGGATGCGGTGGGCGTTACCTCCGCGGAAGATGAAGACGTTGAGGCCTCTGCCTATCGACTACTGTGTCCCCAGTGCGGCGAAGAGTTTACCACCAGCAACCAGGCGGAATGGCGCAACCATCTCAACGTCTCCCACGGCCTGGACAAGCAGCTTCTGCACATCCGGAAGGTAGGCGAGGGGCTCTACCGCTGCCACGACTGCGACGAGGAGTTGACTACGAAGAGCAAGCGTGTCCTGCAGCAGCACCGCTTCAAGCATATGCCCCATGCCGGCTACATTCGTTGCCAGCTTTGCGAGAGCGGGCCGGAGAAGAAGGCGGCTGAAGTGCACAGCATGCGGGAGCTACATCAGCACATCCGCGAACACCATCCTGCAGTGGACGACAGCGACGAGAGGATGCAGAAGGTGCGCCAGCTAATGGACGAGGAGGAGACCGACGAGGACTGTCAGCCACTAGCAAACAGCGACAATGAATCCGGCTCGACGGCGAACAATGGTCCATATATGCCGCTACCGCCGCATTTACTGGACGAAGTGGAAGATTTGGATTTCGAGGATCAGTTTCTGCTGGGATAG
- Protein Sequence
- MEGMDLWTSMFSADFEEGEEEIEQYANENGLDSNPAGDSDDILPEGDGDDEDEGEENEEEDDADDDDDNNDAEDDEEEGTGRDSGKIKEPDLDDDAIFDFDLEPIVSIGEPQSAPLLTPPGPLGAPVRPMHRHSLPRTGQGQGQGRPKEVRLSGVLTRPTTSQINATDANGIPINYELGVIYICPACGAEFRQQDLWKRHMNQMHQFNTRRGLNFMALDKLYHRCLECNKRIAMHSRENLLKHKFTHLPFRCTKCYICKREYKYRQDLMVHLRMVHCDEVVAMMREGFNLAGRKTRVREPRTEQMQRKEPFPEEDDERNDLLEPETETMPAMLEEEAPQRRRKKRYQGGPSGDGGADLCEDYIHYMCPDCGTECDTYAQWSQHIEFVHDYVSRRGLNFISVDMQMQCLECKKIVIPNTIKTLRAHKFTHLSQPEWLRCKLCYKGYTEHHELVSHLLKQHHLESLMPEESEPDPSPVKRTDGVGGGGGDDWEDNGNGSVFDDVSPHFEDVPRRGGRIGSDDIYEPHIDYLCPQCGKEFIEKKHWRTHVVQVHGMNDVTKLNFAIINDRQLKCTECAKIITNAYGIQNAQQHRITHLPFKAYARCRKCHKSYTDRKGLVKHLATYHRVGYVPRKSLKRAGRATCSYASPKQQRKQIVTLGKETYEIIFLDEEQTHSSVDEENDFGEQMQMADEEDLPTVSAGVPPPNPNRYKCVECGTLFPTQVALKLHISEAHTFRDPPPYGPSKKLDISQGKEEAPKKRRLGAGSAAALVPSSSSLAPTSSPSLGTVEQNYIFLCPSCGEEYKTQFEWRRHINEAHNFDKRQFLNMRQLDKYRYQCTQCNDIVCNSKLKGLQDHHFRHLPFRLYLKCLVCGTCYNHKPNIAAHLRTRHNIYERETPWRELHTKPQYSYVQSKEKDRDTAVKSRPQSPTQAVAVVPSSSSGSGSSSRPLWPQSEKRPTRPAGLNTLEDSISYHNAVDMDFITYYCPKCNKNFDSHAFWRKHIVEHHNFNSREGLNFRQIDIHHYLCLECYKRVTVTHTKGAIGQLQSHKFRHLPYRSFKCLTCNGEFVRKQMFFKHLNRDTNRCDNKPSAEEVFDDEEQDAVGVTSAEDEDVEASAYRLLCPQCGEEFTTSNQAEWRNHLNVSHGLDKQLLHIRKVGEGLYRCHDCDEELTTKSKRVLQQHRFKHMPHAGYIRCQLCESGPEKKAAEVHSMRELHQHIREHHPAVDDSDERMQKVRQLMDEEETDEDCQPLANSDNESGSTANNGPYMPLPPHLLDEVEDLDFEDQFLLG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00474099; iTF_00484706; iTF_00471942; iTF_00481152;
- 90% Identity
- iTF_00474099; iTF_00484706; iTF_00471942; iTF_00481152;
- 80% Identity
- -