Basic Information

Insect: Drosophila hamatofila
Gene Symbol: stc
Assembly: GCA_035045345.1
Location: JAWNPA010000019.1:11029845-11033303[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 2e+04 -4.1 1.6 15 19 394 398 393 398 0.81

2 13 0.057 5.8e+02 0.8 2.0 4 11 427 434 426 435 0.90

3 13 5.9e-07 0.006 16.8 15.1 1 19 439 456 439 456 0.93

4 13 2.2e-08 0.00023 21.3 13.6 1 18 492 509 492 510 0.98

5 13 1.7 1.7e+04 -3.9 1.5 7 13 514 520 514 521 0.75

6 13 2e-09 2e-05 24.6 12.9 1 19 550 568 550 568 0.98

7 13 2.4e-05 0.24 11.6 17.0 4 19 616 631 609 631 0.88

8 13 0.062 6.3e+02 0.7 11.7 1 11 671 681 671 693 0.79

9 13 2.8e-10 2.9e-06 27.4 15.1 1 18 698 715 698 716 0.97

10 13 2 2e+04 -4.4 1.2 6 10 745 749 745 749 0.88

11 13 2 2e+04 -7.1 9.2 10 18 763 772 753 773 0.77

12 13 9.6e-09 9.7e-05 22.5 11.1 1 16 809 824 809 831 0.95

13 13 4.6e-08 0.00047 20.3 13.2 1 19 841 860 841 860 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	2e+04	-4.1	1.6	15	19	394	398	393	398	0.81
2	13	0.057	5.8e+02	0.8	2.0	4	11	427	434	426	435	0.90
3	13	5.9e-07	0.006	16.8	15.1	1	19	439	456	439	456	0.93
4	13	2.2e-08	0.00023	21.3	13.6	1	18	492	509	492	510	0.98
5	13	1.7	1.7e+04	-3.9	1.5	7	13	514	520	514	521	0.75
6	13	2e-09	2e-05	24.6	12.9	1	19	550	568	550	568	0.98
7	13	2.4e-05	0.24	11.6	17.0	4	19	616	631	609	631	0.88
8	13	0.062	6.3e+02	0.7	11.7	1	11	671	681	671	693	0.79
9	13	2.8e-10	2.9e-06	27.4	15.1	1	18	698	715	698	716	0.97
10	13	2	2e+04	-4.4	1.2	6	10	745	749	745	749	0.88
11	13	2	2e+04	-7.1	9.2	10	18	763	772	753	773	0.77
12	13	9.6e-09	9.7e-05	22.5	11.1	1	16	809	824	809	831	0.95
13	13	4.6e-08	0.00047	20.3	13.2	1	19	841	860	841	860	0.96

Sequence Information

Coding Sequence: ATGGCCGAgtattggcagcagcagcagcagcaaccgcagcagctgccgcagcagcagccccagcagcagcagcagcaacaacaacaacagctaacaaATGGAGCTGGAGATTCAGCATGTTCGAATACATCCAATGGCCacgctaataataataattatgtaaatttcaatcaattcaTCAGTCAGCACAATTTGGCCAGCTCCGCTTACAATGTTAGCGGCGGTGGGGGCGGGGGCGTAGGCGTCTTTGGCCTAacgcccagcagcagcgccagcagcggcTCCAATTTATATGCGCCACACTTTTATGGCAATCAAAATGGCGACAGTTACAATGCAGCTGGCGCAGCTGTTGCCTATCCCGTTGTCTATCCAAATCCGTATACATCCTTTGGCCCCAATCCgtttgctgcttctgctgccgcCTCCACGGCTGGCTACGATTTCAGCGCTTCCAAGCTGCAGGCAACAGCGCCCGAATTTGTGCCCAATTTCGCCAAGCTGAGTttaacagcaacggcagcaacagtaacagcaccAATAACAGAGAATGCCTCTGTTAAAaatcataacaacaacaacaacactgccACACAGCCAAatggaggagcagcagcgtcAAGTGGGAATTCAGCTCAGCAATCACATCGAGCGGAGCATAGACAATCGAAGAGTCAAGGCAACGGGggtggaggcggcggcggcaacaacagTCGCCAGCAGCGACGCAACGATTATCGTGAGGAGCGCAATGAGCGCAATGAGGAGCGCTATGATCGTGGCAAGAAGCCGCAGAAGCAACAACGTTACGATAATCATCGCAGCAATAAGCGACGCGATGATTGGAATCGTAATCGCGATCGCATCAATGGCTATCCACGCGCTGCCGAAGAACTGGACACCAGCAATAGCAACGACAGTGCGCAGACCTCGCCCGagaagcaacaacaccaacagcagcaacaaatctCGCCCAGACGTGCACCAGATCTGGAGAAGCTGTCGCAGCGCGAGAAACTCATGCGCGACATTGAGCAGCGCCGACTGGAGTGCCTTGTCTGTGTGGAGCTGATCAAGGCGCATCATGGCACCTGGTCGTGCAAGAACTGTTACCATGTGCTGCATCTCAAGTGCACCATCACCTGGGCGAGCAGCTCGAAGTCGAACGAGGGCTGGCGCTGTCCCGCCTGCCAGAATGTGCTGGAGGAGCTGCCGCGCGAATATCTCTGCTTCTGTGGCAAGCTCAAGAATCCGCCCCTGACGCGCAACGAGCTGGCCCACAGCTGTGGCGAGCTCTGCTGTCGGGTCGAGGGCTGCAGCCATGCCTGCACGCTGCTCTGTCATCCGGGTCCGTGTCCGCCGTGCCAGGCGAATGTGAATCGCAGCTGTGGCTGCGGACGCACCTCCAAGATGATGCAGTGCGCCATGAAGCAGCCGCTGCAGTGCGACGCCATCTGCGACAAGCTGCTCAACTGCGGCGAGCATCGCTGCCAGCAGCCCTGCCATGCGGGCAAGTGCGAGGCGTGTGCGGAGCAAGTGCAGCAGAACTGCCATTGTGGCAAGCAGCAGCGCGAGGTGCTGTGCACCCGGGAGACGCAGGACAAGCGCAGCTACTCGTGCAAGGAGTGCTGCGGCAAGCCGCTGCCCTGCGGCAATCACAAGTGCAAGGATTCGTGTCATGCGGGCGCCTGTCGTCCCTGCAAGCTGAGTCCCACCCAAATCACCAGCTGTCCCTGCGGCAAGCTGCCCGTGCCGGCGGCCcagcgcagcagctgcctcgATCCGGTGCCCACGTGCGAGGGCACGTGCAACAAGACGCTGCGCTGCGGAAAGCCAGCGCATCCGCATCAGTGCGCCAGCAAGTGTCACCTGGGCCAGTGTCCGCCCTGTCCCAAGCAGACGGCTGTGAAGTGTCGCTGCGGCCACATGGACCAGATGATCAAGTGCCGCCAGCTGTCGACGCGCGCAGATGATGCCCGCTGCAAGCGACGCTGCACCAAGAAGCGCAGCTGTGGCAAGCACAAGTGCAATGCCGAGTGCTGCATCGACATCGATCACGCCTGTCCATTGCCCTGCAATCGAACGCTGAGCTGTGGCCGGCACAAGTGCGATCAGCCCTGCCATCGGGGCAATTGTCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTGTACTGCGAGTGCGGCGCCGAGGTCATATATCCGCCGGTGCCCTGCGGCACCAAGAAGCCCGTCTGCAAGCGTCCCTGTTCGCGCACCCACGGCTGCGAGCATGCGCCGCAGCACAATTGCCATGCGGCGGCCACCTGCCCGCCCTGCATGATGTTCACCACCAAATGGTGTCATGGCAACCATGAGCAGCGCAAGACCATACCCTGCTCCCAGGCCAGCTTCAGCTGTGGCCTGGCCTGCGGCAAGCCGCTGTCCTGTGGCCGGCACAAGTGCATCCGGCCCTGCCACGAGGGCGACTGTCAGCAGGCGGGCGAACTGTGCCGCCAGAGCTGCGCCAAGGCGCGCCCGCTGTGCGGCCACAAGTGTGCCGCCGTCTGCCATGAGGGCGACTGCCCCGAGACGCCCTGCAAGGAGCTGGTCGAGGTGCAGTGCGAGTGCGGCAATCGCAAGCAGAACCGCAGCTGCCAGGAGCTGGCGCGCGAGCACAGTCGCATTGCCACCGCCCAGCTGGCATCCTCCATGGCGGAGATGTCGCGCGGCAACTACATGGAGCTGAGCGAAATTCTGGCgcccaacaaaaacaacaagtccAACAAAACCTTGGACTGCAATGAGGAGTGTCGTCTGCTGGAGCGCAATCGTCGCCTGGCCATTGGCTTGCAGTCGCGTAATCCGGATGCGCAGCTAAAGTCCTTGACCAAGTACTCGGAATTCTTGCGCGGCTTTGCCAAACGCAATCCGGCGCTAACGAAGAGCGTCTATGAAACGCTCAGTGATCTGGTCAAGCTGGCCAAGGAGAGCAAGCAGAAGTCGCGAAGTCACTCCTTTCCCACCATGAATCGGGAGAAGCGTCAGCTGGTGCATGAGCTGTGCGAGGTGTTTGGCGTGGAGTCCGTCTCCTATGACAAGGAGCCCAATCGCAATGTTGTTGCCACGGCGCACAAGGAGCGCTGCTGGCTGCCGGCTACGAGCATCATGGAGGTCCTGGCACGTGAATCCGGGCAACGTCGCGTTCCAGTGCCCAGCAACAATGCGTGGGGACTCAAAAAGTAG
Protein Sequence: MAEYWQQQQQQPQQLPQQQPQQQQQQQQQQLTNGAGDSACSNTSNGHANNNNYVNFNQFISQHNLASSAYNVSGGGGGGVGVFGLTPSSSASSGSNLYAPHFYGNQNGDSYNAAGAAVAYPVVYPNPYTSFGPNPFAASAAASTAGYDFSASKLQATAPEFVPNFAKLSLTATAATVTAPITENASVKNHNNNNNTATQPNGGAAASSGNSAQQSHRAEHRQSKSQGNGGGGGGGNNSRQQRRNDYREERNERNEERYDRGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRAAEELDTSNSNDSAQTSPEKQQHQQQQQISPRRAPDLEKLSQREKLMRDIEQRRLECLVCVELIKAHHGTWSCKNCYHVLHLKCTITWASSSKSNEGWRCPACQNVLEELPREYLCFCGKLKNPPLTRNELAHSCGELCCRVEGCSHACTLLCHPGPCPPCQANVNRSCGCGRTSKMMQCAMKQPLQCDAICDKLLNCGEHRCQQPCHAGKCEACAEQVQQNCHCGKQQREVLCTRETQDKRSYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPTQITSCPCGKLPVPAAQRSSCLDPVPTCEGTCNKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPVCKRPCSRTHGCEHAPQHNCHAAATCPPCMMFTTKWCHGNHEQRKTIPCSQASFSCGLACGKPLSCGRHKCIRPCHEGDCQQAGELCRQSCAKARPLCGHKCAAVCHEGDCPETPCKELVEVQCECGNRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPNKNNKSNKTLDCNEECRLLERNRRLAIGLQSRNPDAQLKSLTKYSEFLRGFAKRNPALTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00472738;
90% Identity: iTF_00549946;
80% Identity: -