Basic Information

Insect: Drosophila gunungcola
Gene Symbol: -
Assembly: GCA_011057485.1
Location: WTSR01004945.1:891549-908045[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.67 62 4.2 2.9 3 23 281 303 279 303 0.92

2 15 4.4 4.1e+02 1.6 2.0 3 21 443 461 442 465 0.90

3 15 0.068 6.3 7.4 1.0 2 23 487 509 486 509 0.93

4 15 0.64 59 4.3 1.0 1 23 526 549 526 549 0.94

5 15 0.22 21 5.7 0.2 1 21 554 574 554 578 0.90

6 15 0.0042 0.39 11.2 0.2 2 23 621 643 621 643 0.92

7 15 0.055 5.1 7.6 0.3 3 21 650 668 648 669 0.91

8 15 3 2.8e+02 2.2 1.2 1 23 691 713 691 713 0.93

9 15 0.00017 0.016 15.5 2.3 2 23 726 746 725 746 0.97

10 15 4.7e-05 0.0044 17.3 1.6 1 23 752 775 752 775 0.95

11 15 0.00029 0.027 14.8 0.4 1 23 799 821 799 821 0.98

12 15 2.6 2.4e+02 2.4 1.3 1 23 829 853 829 853 0.93

13 15 0.051 4.8 7.7 4.1 1 23 858 883 858 883 0.96

14 15 0.12 12 6.5 2.6 1 23 893 915 893 915 0.97

15 15 0.00072 0.067 13.6 4.1 1 21 921 941 921 946 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.67	62	4.2	2.9	3	23	281	303	279	303	0.92
2	15	4.4	4.1e+02	1.6	2.0	3	21	443	461	442	465	0.90
3	15	0.068	6.3	7.4	1.0	2	23	487	509	486	509	0.93
4	15	0.64	59	4.3	1.0	1	23	526	549	526	549	0.94
5	15	0.22	21	5.7	0.2	1	21	554	574	554	578	0.90
6	15	0.0042	0.39	11.2	0.2	2	23	621	643	621	643	0.92
7	15	0.055	5.1	7.6	0.3	3	21	650	668	648	669	0.91
8	15	3	2.8e+02	2.2	1.2	1	23	691	713	691	713	0.93
9	15	0.00017	0.016	15.5	2.3	2	23	726	746	725	746	0.97
10	15	4.7e-05	0.0044	17.3	1.6	1	23	752	775	752	775	0.95
11	15	0.00029	0.027	14.8	0.4	1	23	799	821	799	821	0.98
12	15	2.6	2.4e+02	2.4	1.3	1	23	829	853	829	853	0.93
13	15	0.051	4.8	7.7	4.1	1	23	858	883	858	883	0.96
14	15	0.12	12	6.5	2.6	1	23	893	915	893	915	0.97
15	15	0.00072	0.067	13.6	4.1	1	21	921	941	921	946	0.93

Sequence Information

Coding Sequence: ATGAACACGGACGATCTTGAGGATACACATCTGTGTATCAAGTGCAATGCCACCATTCTTGGGCTCACGAAATACATTGAGCACCGGAAAAGGAACTGCCTGATGCCAGAGAAGCAAATTGTGACGCCAACAACAGATGGACCAGCAACAACATCCAACCCCACTCAAGTATCTCCGACCAGTAACTTGAGTCACACCTACGATGGCTTCCACTTCACGGAACCGGAGGCTCCAAGTAGCTATCTCCGTAAGACTGCAGCTAGTCATGGGGGAAAAACCTCTAAATCGCTGGCGGAAGTCTATGACCTGCCATACGAACTTGGAGCTGATCTGTTTTTCTCCTCGCTACAACTGCAGAGCGTCTCCACGGGCGGAAAAACAGGATCGGTGGCTCGTCAGGAGAGGAGCAAAGATGAGTCCTGGCCAGCGCCCAGTGGAGACCCCTTACTGAAAGCTGTCAGGGAGCATGATGAGGCGGTGTTCAAGCCCCTCAACTTTGATCATGATTCTCCAGAAGCCAGTGAAGAAGAGGAGGATGACGAGGAACACGATGATTTTGATGCGGATGACGATGAAGAGGAGTATGAAGTGAGGCGTCATTCACCCCCCACTGTGCCCGCCACCCACACAGGTGGTAAGTGGAAGCCGGAACACCGTCCGCAACTGCGACATCCACACATAGAACGCATCTCGCCCAGCTGGGATGAGCCACCCGAAGAGACATACGCCCACCCTCCAGCAGATCATACGAAGGGCAAATGGGTGCCAGGCAGCAAACAATTGGAGTATCGCGAAAATATAGATCTCACCAGGCTGGAGCAGCCGACTGCGAGCTTTTGGTGCAACATCTGCTGTAGAAGGCTGAAAAGCCGCACGAACTACGAGCAGCATTTGCGGAGTGGCTACCACGTTAAAAGAGCCGACGCAGAGTGCCAACTAGAGCAGGCTACTCTGGGCAGGGAACTGACCCTGGGCAAGGATTTCGCAGTGGAAGCTAACAAGGACAAGCAAGAACCGAAGCCACCAAAACGACACAGAAGGGCCAATCTCCTGCGATGCGATCTCTGCCGTCACACGATGGCCAGGCATTTGATGGGCAAGCATTTGATCTCCCATTACCACTACAGAAGACTGCAGCAGCAGAGTCGGCTGAGGAGGAAGACTTGCCTGCAGGACATACTCAACCACATGGGCAGCATAGTGAGGCAATCTCCTTTCCAATGCCTGCCCTGCAGATTCTACGCCAACTCTGAGGAGACCTTTCTCCACCACTGGCAATCAGAGGATCACTTGAAACTCACGCAAAAACTGGGCGGAACATTCTGGTGTGGCTTTTGTCAGTTTGAGTGCACCACCAATGATTCCATGTGGCTTCATTTGTTGCATCCCTCTCATAAGGAAGTGCAAATGGCCCTCAACAGATCAGTTCCCATATGCATAGCCCAAAGAAGACGCCTCCAGTGCTCCAGTTGCGGAACGGGCTTTTTGTACAACTTTCAACTTCGTCGGCACTTCAGCTCGGAACACCCCGGCATTCCCCCTACAGGCACCGCAGCCGATGAATATCAGAGTAGGTTTCGGTGTGGCTTGTGCGGGGCTCCACAGAAATCCCGCCTGGCTCTCCAGCGTCATGAAAAGCACAAACACCTCTTGGCGAGGTACTACTGTGCCATCTGTCGACTGGAATTCGATACACCCTTGGATGCGCGACGGCACCGAAGCTTGATGCAACACAAGCTGAAGGCCAGGCCCAAAGTGTCAGTCTCACAGCCGGAAAAAGAAATAGAACATATGCTAAGGGAAGTCCTGGAGGAGCCACCACTTAACCCTCCCGCAAAAAGGAGTACACTTAACAAAGCAAAATGTTCGAACTGCCGGCAAGTGTTTGACTCACCTCAGAGTTTGGCCCAACATCGAGCTGAAGTTCATCCGGCAGACAACCATTTGTGTTTGAGCTGTGGAACAAGCTTTCAGTCTGCTCAGGCACTCGGCAGGCACACCCGCAGCTGTCAGCCGCTGGCCAGCACCTCATCATCCGCCAATCCCTCTTTGGCCCAAAGGAAACCCATCTTTTCTTGTGACCAGTGTAGCTTCCAATCTCAGTATGAGTCCGATCTGGTCTATCACCGCATTTTTCACTCACGATCTGGAACCATTGGTAGGAACGAGCTGCTTCAGTGCCCCCTGTGCCCCAAGAATTTTAAGAAGCACTCCCTCAGAGCTCATCTGAGAAACCACACagatgaaaaaatatttgagtgCACAGAGTGCCTGCAGAAGTTTGCCAGAAGCCACAACCTTAAGAACCACATTGCCAACATGCATGCCAAAAAGGAGGATCAGGACAAGGATAAGCCCGCAACGAAAAGAGCTGCCGATCAATCCAAACCCAAGTACCAGTGTGGAACCTGTGGAAAAATTCTGGCGAAAAAGTACTCCCTAAAGCTGCACGAGCTCAGTCACACGAAGTCACTGGAGCGACGTTATCACTGCCATTTTGCGGACTGTTCATATGCAGGTCTGACCCCGGAAAGTCTCAAAACTCACCTGGTATCCCATGCCCAGGGCACCCACAAGTGTAAGCGGGACAGCTGCAACTATGTGGGAAAGAGTGAGCTGCACCTGAAAAGGCACATGAAGTCGGCACATCCTGGGGAGGAGAGTGGCGCGGAGTGGTTCTCCTGCGACCAGTGCGAGTTCAGGGCCCGCATCAAGGGCCATCTTCGCCGGCACTCGCTGCGGCACTCGGGCCAGAAGCCCCATCAGTGCCCCCACTGCGATTTCCAGTGCAGCACCATCGACAACCTGCGCAAGCACATCATCAAGACGGGCAAGCATCCCGGCAAGTTCATCTACGAGTGCGGAAAGTGCTCCGATCAAACAGCCATCGATATCTTCAAGAGCAACAGTTTCAAGGAGTACCAGAAGCACATGCAAACTCACAAAGCGGACTGA
Protein Sequence: MNTDDLEDTHLCIKCNATILGLTKYIEHRKRNCLMPEKQIVTPTTDGPATTSNPTQVSPTSNLSHTYDGFHFTEPEAPSSYLRKTAASHGGKTSKSLAEVYDLPYELGADLFFSSLQLQSVSTGGKTGSVARQERSKDESWPAPSGDPLLKAVREHDEAVFKPLNFDHDSPEASEEEEDDEEHDDFDADDDEEEYEVRRHSPPTVPATHTGGKWKPEHRPQLRHPHIERISPSWDEPPEETYAHPPADHTKGKWVPGSKQLEYRENIDLTRLEQPTASFWCNICCRRLKSRTNYEQHLRSGYHVKRADAECQLEQATLGRELTLGKDFAVEANKDKQEPKPPKRHRRANLLRCDLCRHTMARHLMGKHLISHYHYRRLQQQSRLRRKTCLQDILNHMGSIVRQSPFQCLPCRFYANSEETFLHHWQSEDHLKLTQKLGGTFWCGFCQFECTTNDSMWLHLLHPSHKEVQMALNRSVPICIAQRRRLQCSSCGTGFLYNFQLRRHFSSEHPGIPPTGTAADEYQSRFRCGLCGAPQKSRLALQRHEKHKHLLARYYCAICRLEFDTPLDARRHRSLMQHKLKARPKVSVSQPEKEIEHMLREVLEEPPLNPPAKRSTLNKAKCSNCRQVFDSPQSLAQHRAEVHPADNHLCLSCGTSFQSAQALGRHTRSCQPLASTSSSANPSLAQRKPIFSCDQCSFQSQYESDLVYHRIFHSRSGTIGRNELLQCPLCPKNFKKHSLRAHLRNHTDEKIFECTECLQKFARSHNLKNHIANMHAKKEDQDKDKPATKRAADQSKPKYQCGTCGKILAKKYSLKLHELSHTKSLERRYHCHFADCSYAGLTPESLKTHLVSHAQGTHKCKRDSCNYVGKSELHLKRHMKSAHPGEESGAEWFSCDQCEFRARIKGHLRRHSLRHSGQKPHQCPHCDFQCSTIDNLRKHIIKTGKHPGKFIYECGKCSDQTAIDIFKSNSFKEYQKHMQTHKAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00578870;
90% Identity: -
80% Identity: -