Dgun009346.1
Basic Information
- Insect
- Drosophila gunungcola
- Gene Symbol
- -
- Assembly
- GCA_011057485.1
- Location
- WTSR01005181.1:526024-529968[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.0002 0.019 15.3 0.9 2 23 179 201 179 201 0.96 2 15 0.0019 0.18 12.3 1.9 1 23 216 239 216 239 0.96 3 15 0.0037 0.35 11.3 5.9 1 23 310 333 310 333 0.96 4 15 0.0013 0.12 12.8 1.4 2 23 388 409 387 409 0.97 5 15 1.5 1.4e+02 3.1 0.7 1 20 525 544 525 546 0.86 6 15 0.013 1.2 9.6 0.6 1 23 555 577 555 577 0.94 7 15 0.00022 0.021 15.2 0.5 1 23 584 607 584 607 0.96 8 15 9.7e-05 0.009 16.3 1.9 1 23 615 637 615 637 0.98 9 15 0.0085 0.79 10.2 0.0 2 22 664 684 663 687 0.90 10 15 2.7e-05 0.0025 18.0 1.2 1 23 722 745 722 745 0.96 11 15 0.051 4.7 7.7 0.5 1 23 782 805 782 805 0.92 12 15 1.1e-05 0.001 19.3 0.2 1 23 826 849 826 849 0.96 13 15 0.065 6 7.4 0.2 1 23 859 881 859 881 0.94 14 15 0.00018 0.016 15.5 5.4 1 23 887 909 887 909 0.99 15 15 2.2e-06 0.00021 21.5 2.0 1 23 915 937 915 937 0.99
Sequence Information
- Coding Sequence
- atgACTCGGACATGTAGGATATGTGGCGGCGACGACGGACGCTACTGGATTGAAACGCCAGTGGAGAAATACGCGGAGAAGACCTtcggccagctgctgctcGAATTAACGCGCATCGAGGTGGCCATGGCGCAGGCCGAGAAATTTCCCCAGTGGCTGTGCCTGGGGTGTGCCGAGAAACTGGAAACCACTTACGATTTTGTGCTGCAGGCGCGCCAGACGCACGAACTCTGGCTGCAAAAACTGGAGAGCTCTGTGGTCGGAAAGGAGCACGATGGCATGGAGGAACCCATGGAGGCCTTGGAGTGCCTCCGCGAGACACCCATTCACCTGTTCGAAATAGAAGGCGTGACCATCAAGACAGAGGAGCTGGCTCCCACGCACCTGGCGACCAAGGCTGATCCTCTAGTGCGCTCGCGCATCGTCAAGCGAAGCATTGTGCACCATTTTAGCGACTCAGATGACGACCAGGATGATGTGCCCCTGCGTCAACGAAAGATYAGTAGCTGCCCTTCTGATCCGCCCAAGCCAAACGTTTGCGAACTCTGCAACAAGGCCTTCAGATATGTCACCAATCTGTATCGACACAAGCAGCGGGATCATGGTCTCCCCTGTAAAAGCGGAGAAGAGTTCGATGATAACTATTACAAGTGTGACCAGTGCGATAAGTCCTACATATACGTGATGGCTCTGGTAAAGCACAAGCACAAGGAGCACGGNNCCAGTCTGTTGCCCACAAAGATGTCCAGGCGAAAGTTACCAGGAAGGCCAAGGGCATTGCCCGAGGATGAATGTCCAGCAAGTCCTGCTTCAAACTCTGGAAACTCCACTCATCGCAGCAGAACCAACAACGACACCCTCGTGCACAGCATTATTAAGGCAGTAGAACTCTCGGATGAGGATGGCAACAGCAATGTGGACAACTACTACAAGTGCGATCACTGCAGCAAGACCTACAAGTACATTGTGAGCTTGATCAAGCACAAGCACAAGGAGCACTCCGACAAACAGTCGGACAAGCAGTCGGAGACGGAGGACGATCAGCCCCTGCCCTCCACATCCGCCTCGGCAGTTGCCCGAGTTGCCAAGCCATCGAGAATCAATCGACGAGTCGATGGCTTCGATAACCATCGCTGCGAACCCAATGGCGCCAAGGAAATCAAGTGTATGATCTGCCTGCGACGCTTCACTAAACTGCGCGAGCTAAGGAATCACCTGCAGAACCATCCCACAGACTTTGATTTTGAGGCGCATGGCGAGCCCATTGAGCGAATCGCGGAGGGATTTTTCAAGACCGCGGTGGAGTCCACGGCGGAGGGCTTGAAGCGGCGCATCTTTCGGGATCTCAGGATGGGTGTTTACGGACGCTACTATTCTATTACAAACCAAGCTCGCTACGAAATGACTCTAGACAGCTCCGATACAGACAGCGATGGCGAGGAGGGTGACGGGGATGTGGTCATTCGGCGCAGCTACTCCTGCGAACTGTGCGAGTCCCCGGAGGCCAGGTGGCCGCGCAAGTATTTACTGCACCAGCACCACCGGAAGGAGCACACCTGGCTGGATGCTCCGCATGTGTGCCAGCGCTGCGACTCGCGCTTCCTCAATGCCCAGCTGCTGGAGCACCACACCATCCAACTGTGCCAAAACACCCTGAAGCGCTTCATGTGCGACAAATGCCCTCAGCGTTTCTTTTGGCGCCGGAATCTGCGAGCCCATCTCGTCGAGCACAAGAGCAAGCAAGAGGATTACCCGTGCGATCTGTGCTCCCGGAGTTTTCAAGACAAAAGCGCCGTGACCAAGCACAAACTGATGATGCACCGCGATAGCAACATGCAGCTATATCCTTGCCGCTGGTGCACCCGCACCTTCTATCGTCCTGCCCTGCTGCACAAGCACGTGCAACGCCACGGATTCACTGGCCACGACCTGCCCCTTGCTGAAACGCTGCTGGCGGATGCCTCCAAACCTGCGGGACCAAAGAGCATCCAGTGCAAGGTGTGTGCGATCCAATTCATCAGCGTAGCAGACTTGCGGCGGCACATATCCATGCAGGGTCACAGTGATCAGCCGTCGGCTTACATGATCAGCACGGCAACTGGATTTGAGCTCCTGCTGGAGGATACGGACGACAGTGATGAGGAAAGCACTACTAGCAGATCGTACACCTGCGATCTGTGTGATATGAGCTTCCGGCGACGACGGGAGTTGAGTGAGCACCAGTACTCGCTGCATTGCTTCGACAAGCTGCCACATTCCTGCNNNCACTGTATTTTCAAGACGGTGGATAAGTACATGCTGGATCAACACGTTCGCAACCAATGCTTAAACAAGGAGAAGAAGTTCGTCTGCTCGCGCTGTGGCTACAAGTTCATGTGGGAGGAGAACCTAAACCAGCATTTTGCCAGCCAGCATCCCAAGCAACCCACTGTTTTGGAGCAGCACCCACCGGTGAGGAGGAAGCGACGCTTCCGCTACCCGTGTCCCCACTGCTGGCGTTCCTTTGTCGTGGAGCCCAGCCTGCAGAAGCACATCAGGGACATGCACCTGGCCAAAAAGAATCCAGTCAAGAAGTACCTCTGCTCCCTATGTGGCCTGGAGTCGCTGACGCCCAACAAACTGAGCATCCACATGCGGCGTCATACCGGCGAGAAGCCCTTCAAGTGCGATCTCTGCGACATGCGTTTCACGGTCCACTACGAACTGAAGGTGCACCACCGCAGGCACACAGGCGAGCGGCCCTACCAATGTAACTTCTGCTCCAAGGACTTTGCACGACAGGACAAACTGAAGCGGCACGTCCTAACACACAACGTGAAAACTTAG
- Protein Sequence
- MTRTCRICGGDDGRYWIETPVEKYAEKTFGQLLLELTRIEVAMAQAEKFPQWLCLGCAEKLETTYDFVLQARQTHELWLQKLESSVVGKEHDGMEEPMEALECLRETPIHLFEIEGVTIKTEELAPTHLATKADPLVRSRIVKRSIVHHFSDSDDDQDDVPLRQRKISSCPSDPPKPNVCELCNKAFRYVTNLYRHKQRDHGLPCKSGEEFDDNYYKCDQCDKSYIYVMALVKHKHKEHGXSLLPTKMSRRKLPGRPRALPEDECPASPASNSGNSTHRSRTNNDTLVHSIIKAVELSDEDGNSNVDNYYKCDHCSKTYKYIVSLIKHKHKEHSDKQSDKQSETEDDQPLPSTSASAVARVAKPSRINRRVDGFDNHRCEPNGAKEIKCMICLRRFTKLRELRNHLQNHPTDFDFEAHGEPIERIAEGFFKTAVESTAEGLKRRIFRDLRMGVYGRYYSITNQARYEMTLDSSDTDSDGEEGDGDVVIRRSYSCELCESPEARWPRKYLLHQHHRKEHTWLDAPHVCQRCDSRFLNAQLLEHHTIQLCQNTLKRFMCDKCPQRFFWRRNLRAHLVEHKSKQEDYPCDLCSRSFQDKSAVTKHKLMMHRDSNMQLYPCRWCTRTFYRPALLHKHVQRHGFTGHDLPLAETLLADASKPAGPKSIQCKVCAIQFISVADLRRHISMQGHSDQPSAYMISTATGFELLLEDTDDSDEESTTSRSYTCDLCDMSFRRRRELSEHQYSLHCFDKLPHSCXHCIFKTVDKYMLDQHVRNQCLNKEKKFVCSRCGYKFMWEENLNQHFASQHPKQPTVLEQHPPVRRKRRFRYPCPHCWRSFVVEPSLQKHIRDMHLAKKNPVKKYLCSLCGLESLTPNKLSIHMRRHTGEKPFKCDLCDMRFTVHYELKVHHRRHTGERPYQCNFCSKDFARQDKLKRHVLTHNVKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00548234;
- 90% Identity
- iTF_00494537;
- 80% Identity
- -