Dgun004804.1
Basic Information
- Insect
- Drosophila gunungcola
- Gene Symbol
- -
- Assembly
- GCA_011057485.1
- Location
- WTSR01005318.1:957434-962723[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8.5e-12 1.4e-08 34.2 0.0 1 40 440 480 440 483 0.90 2 4 4.7e-14 7.7e-11 41.4 0.1 2 39 495 532 494 535 0.94 3 4 1.1e-17 1.8e-14 53.0 0.0 1 45 549 594 549 594 0.98 4 4 1.1e-19 1.8e-16 59.4 0.0 1 43 601 644 601 645 0.97
Sequence Information
- Coding Sequence
- ATGGGGGTGGGCCTCTTGCGCACCGCCGAGCAGCTAAAGATCAAGGGCCTCTGCGAAACCGCCGAGAACGCGGATGACCTTAACGACGCGGCCACAGCAACAATCACTGTTTCGGAGAACATTCAGCAGGCGGTCTTGCTAAGCTCCTcggccagcggcagcagcggaAGCTCGGCCGGCGGACAGCAACCACCACAGACGCCATCCGGTTTGCAGCCGACGCCACGCAGGTCTCGACTCAAGCGCTCCAAATCGCCGGACTTGCCAACGGGCGTAGGAGCAGGAAGCTCTGGAGGCTCGAGCAGTTCATcttcgcagcagcagcagcaaccccAGCCGGCGCATCACCACCACCCGCAGACCATACTCATCCAGGGCCAAAATCCAAATTCAATTGTGAGCCTGCAGCAGACGGCCGACGGCAATTATATACCCGTGACGGGAACAGGAGACGATTCGGACGTCGAGGATCACGATCACGAGCACGAACACGGCCACGGACACGGGCACGGAGGACATCCGCACGGACACGGACACAGTCACGATCACGAGCACGAGAACAAGCCGAATAAGATCTGCAAGACCGAGCAATCGGTGGCCTCGCCGGCGTCCAATTCATCCAGCGCCTCAAACAATGCAACAGCGGGCGTGAGCGGCGTGACATCCACCGGCCAAGCCATCGTCACACAAATTGTAGTAGCGCGCGAcggaaaagatacaaaaaatatgacTAGTTTAGGCATGGGCATGAACGGCGGCCTATTGGGCGTGCCCATGGGCTTCCTGGACTTCACACCCGAGCCACCAGCACCATCCGCCACCCCAGTCACCGTTACGGAGCACGTCGATCTGTCCTGCAACCCCAGCACGGATACGCGCGATCTATCAAATCCCACCGAACCGCTCGATATAGACAATCATCTGGCCCAGCAGATCCATCGGCTCGATCAGTCCCCCATGCACTCGATATCGCATCACCATACCGGCGATGAAAGCAACTCCAATCTGGTGCAGCACATCAAGAGCGAGATTAAACACGAGCCGGGCATGATAATAACGCCAGAGATTGTCAACATGATGTCCTCAGGGCATATGGACATGTACAATTCGGACACGAGCGAGGATTCGATGATGATCGCCAACGGCTCGCCGCATGATCAGAAGGAGCCGCACTATACGAATTTGGACCAGCAACACGGGCTGGGTGGCAGCGTTTGCGGCCCGGGGCCCGgcggtgctggtggtggtgggggCATGAGTGGTGGtgctggctctggctctggcgaGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAACCAAAACATGAGCCTGACGAAAGCGTCCGCCATTTATGGCATCCCATCGACCACCCTGTGGCAACGTGCTCATCGCCTGGGCATCGAAACGCCCAAGAAGGAGGGCGGCACCAAGTCATGGAACGAGGATGCCCTCCAGAATGCCTTGGAGGCGCTGCGTTCGGGTCAGATATCCGCAAACAAAGCGTCCAAGGCCTTCGGCATCCCCTCCTCGACGCTCTACAAGATTGCCCGGCGCGAGGGCATCCGCCTTGCGGCGCCCTTCAATGCCGCCCCAACCACGTGGACGCCCGAGGATCTGGAGCGTGCCTTGGAGGCGATACGGGCGGGTAACACCTCGGTGCAGAAAGCCAGCGCTGAGTTTGGCATACCCACAGGAACACTTTACGGACGCTGCAAACGGGAGGGCATTGAGCTGTCGCGTTCGAATCCAACGCCCTGGTCCGAGGATGCCATGAACGAGGCCCTGAACTCAGTGCGCGTTGGCCAAATGTCCATTAACCAGGCGGCCATTCACTACAACCTGCCCTACAGCTCGCTCTACGGCCGCTTTAAGCGCGGCAAATACGACGTGGTGGCCAACACGAGTGGCGTGGCGCTCCTCAACACCTCGGGCAACACCACCGGCAGCATTGAGATTATCGAGCACAGTCAGGAGAATTCGtTGCATATGTTACAGCAACAGTTCCCGTACAGCCCGTCGCCGCATCCGCCAACGCCGCAGCACCACAGCACGCCGCAGCATCACAGTACGTCGCAGGGTCCGCCGACGCCGCAACACATGCAGCAGCACGTGGTGCacatgcaacagcagcagcagcagcagcaacagNANNNGCAGCAGTCGCCCCACCCGGGTCACCATCCGCAGCACATGCAGCAGGATGTGGTTACATCGAGCAGTCAGGTGGTGCACAGCCANNNNNNNNNNNNNNNGCAACAGCAGCTTCAGCAGATCTATCAGCATCACGGCACGCCGGAGCGTAGTTGA
- Protein Sequence
- MGVGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQAVLLSSSASGSSGSSAGGQQPPQTPSGLQPTPRRSRLKRSKSPDLPTGVGAGSSGGSSSSSSQQQQQPQPAHHHHPQTILIQGQNPNSIVSLQQTADGNYIPVTGTGDDSDVEDHDHEHEHGHGHGHGGHPHGHGHSHDHEHENKPNKICKTEQSVASPASNSSSASNNATAGVSGVTSTGQAIVTQIVVARDGKDTKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSISHHHTGDESNSNLVQHIKSEIKHEPGMIITPEIVNMMSSGHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNLDQQHGLGGSVCGPGPGGAGGGGGMSGGAGSGSGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVALLNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSTSQGPPTPQHMQQHVVHMQQQQQQQQQXXQQSPHPGHHPQHMQQDVVTSSSQVVHSXXXXXXQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00565294;
- 90% Identity
- -
- 80% Identity
- -