Dgla009949.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila glabriapex
Gene Symbol
-
Assembly
GCA_035042305.1
Location
JAWNLN010000066.1:14573291-14576892[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 0.14 8.7 6.9 0.0 1 13 353 365 353 373 0.81
2 8 8.7e-05 0.0054 17.0 2.1 1 23 722 745 722 745 0.96
3 8 0.00088 0.055 13.8 3.4 1 23 774 796 774 796 0.97
4 8 0.00011 0.0069 16.7 6.5 1 23 802 824 802 824 0.97
5 8 3.8e-05 0.0024 18.1 0.9 1 23 830 852 830 852 0.98
6 8 0.00062 0.039 14.3 1.4 1 23 858 880 858 880 0.98
7 8 0.011 0.72 10.3 0.0 2 23 887 908 886 908 0.96
8 8 0.018 1.1 9.7 0.1 3 21 916 934 914 935 0.91

Sequence Information

Coding Sequence
ATGACGCCAGCAGCTGTTGAGGATGGGCGTGAAAAATGCGGCAGCGTCTACACTTGGAACTGTGCTGGCGAACTCTATGGCATCGAGTGTGAGCTGTGCGAGGAGCGACCCCTTTGTGCACTTGATGAGTTTGCCGAGCATATGGAGCTGTGGCACTCCGATTGGCAACAGGCACCGGAGGATGAGCTCATGCAGGAGGTCCTCGCCGAACAGTCCAGCAGCAACTGCGAGGTCAACGAACTCAAACAGCAGCTGGTTCAAGAGCTCAACTCGCTCGAtaaacagccacaacagccacagcagccacaacagccacagcagcaaccacagctgATGGACACATTTCAACTGAACGATCAAGTTCAGTTCAATGCGGATagtGGGCTGCCCAGTGTGGAAACGGCAGCGAAGTTGACGACGGAGCATGTGCAGCAGCTGATTGAGCTATATCGATCGCATCCGCGTCTGTGGGATCAATCGCATCCAGAGTTTCGGGACGTGGAGCAGTGTCGCCACTCGTGGCGCCAGATAACGGATGCGTGGAGTGCCCACTGTGGACGTGGCTTCAGTGTGACCGATGTGCGCATCCGGATCTCAACGCTGTGCCAGCGATTCCTCAAGCAGCGTGAACGCATCGATGCCGAGGGTGATCTCGATGAGGGCGCCAAATTCGTCCATTACGATCAGTTGCGCTTCCTCTGTGAGCAGCAGGCGCTGCTCAAGCGCCAGGAGCACTTTGCCCGCGAGAATCGCAAACTGCTCGAGATCTACGAGCATTATCCAATACTCTGGCACAATGCCCACAAGAGATTGCGCTGCGCCGCAACGGTGAAGAGGCGCCACGAGGCACATCGTGGCCTCCAGCTGGCGTTGCGTATGTGCGGCATCAATCTGTCCGGCTTGGCGATGCAGCGCCGACTGCAGTCGCTGAGGAAACGCTATCGCCTGGAGAAGATACGCTATCTGCACAGTGTCGTCGAGGGCAAACAATCGGAATTTGTGTCCATCTTTGAGCATTATGCCGAAATGGAGTTTCTGCACAAGCACATCGATCCCTATGTCTGTGCTGGCTGCGGCAAGATCTTTGAGAATCTGATCGGTCATCAGGCGCATGTGCAGGACAGCTGCGAGGAGCAATCACTGGCTGCCGCCGACTGCAAACAGTTGACCGAATCGGAGGCGACGCTGGGCGAGCTTATGGTGCAGCTCGAGCAGCACGaattacagcagcagcagcagcagcagcagcagcaacagcaacaccagcaacagtcTGCCGGAGAAGAACCCGAGCAGCTGCAGGTAGTGGAGCAAGTGGAACAGCAGCACGAGCAgttggtggcagcagcaaatacaacTGAGCTAGCCACGCCACTGCTACACAGTCTAGCAGAACAGGAGGATGCGCAGCAGGCGGAGATTGAGCAATATCCTGACAAGGAAGATCCGCACGGCAAAGAGTCCTTCTCTGAGGATAGCCTGTCGACGGGTGGACAGCTACGGATGCGCCTCAGCCTGGAGCTGACCAATAAACTCATTGAGCTCTATCAATCGCATCCAAATCTCTGGGATCCCAATCATCTGGACTATCATGCGAGGAAACAGCGACGCCAGGCCTGGCACAACATTGCCGCCCAGCTCAACACATTCGCCGGCTCTCCGGATCGCTTCAGCTGGCAGATGTTGCATCGCAAGCTCACCGATTATGTCAAGTACTATCGACGCGAACGCCAGCGAGAGGAACTGGCGGTTGGAGGTGGTGGCGAGGGCACACGTTGGGGCTTCTACGAGGCGTTCAGCTTTATGGACGATGTGGTGCCCATAAATCGTGTGCTGCAGAAGTCGTTGCAACAGCGCGACAGCAATCTGAAGATCATCCAGGTGTATCAGAGCTACGAGCAGCTGTGGTGCACCACACATCCGGATTATACGAAACGTAAGCAGCGCTTGCGTCACCTGGAATCGCTGTGCACCCGCCTGCAGGAGGAGTGCAATCTGCAGATAACCGTTGAGCGTTTGAAGAGTCGTCTGATCGAGTTTCGCTGCCAGTATCGCCAGTGCAAGGGGGCACGCCAGGCGGCGCTGCAGCGCAACAATGCCAACTGGCAGCCGACCTATGAGTATTATGCGGCGTTGCAGTTTCTCGAACTGCACGTGTCGCCATTCAACTGCGAACGGTGCACGGCGAGCTTTAAGCGGCGCAGCGATTATCTGCGGCATCAGCGCAACGTTCACTTGGACCAGCAGCTGAATGAGatgcagccgctgcagcgACGCCGTCGCATGCGGCGTGGCACGAATGCGACAAATCCGCTGGAGCACATCTGTCACATTTGCGCAATGAAATTCTCGTTGCGCACCAGCCTCCAGGCGCATCTGCGTCGCCATTTGGGTCAGCGGACACACTGCTGCACCGACTGCCCCAAGAAGTTCTTCAATTCGACATCGTTGCGGGTGCATCAGCGCAGCCATACCAAAGAGCTGCCGTATGTCTGCGAGCATTGTGCCCGGGGCTTTGTCAACGCCAGCAAACTGAATCAGCATGTTAAGCGGCACACGGAGAAACGGGATTATCCGTGCACGCGCTGCGACAAGGCGTTCTACACGGCCCACGAGCGAGATCGCCACTTGCGCGCCCATCTCAACATTAGGGACAAGGTGTGTCCGTATTGCAGTCGGGCCTTTGTCGTTGGCAGCGCCTATTATGCCCATCTTAATTTGCATCGGGGCGAGAAGCGTTATGGTTGTGCTGCATGTGGCAAGCGATTCGCTCAATATGCGGGTCTCTATAAGCATCGCAAGCGCTGCACAATCGCCCAGCTGCAGAAGTGa
Protein Sequence
MTPAAVEDGREKCGSVYTWNCAGELYGIECELCEERPLCALDEFAEHMELWHSDWQQAPEDELMQEVLAEQSSSNCEVNELKQQLVQELNSLDKQPQQPQQPQQPQQQPQLMDTFQLNDQVQFNADSGLPSVETAAKLTTEHVQQLIELYRSHPRLWDQSHPEFRDVEQCRHSWRQITDAWSAHCGRGFSVTDVRIRISTLCQRFLKQRERIDAEGDLDEGAKFVHYDQLRFLCEQQALLKRQEHFARENRKLLEIYEHYPILWHNAHKRLRCAATVKRRHEAHRGLQLALRMCGINLSGLAMQRRLQSLRKRYRLEKIRYLHSVVEGKQSEFVSIFEHYAEMEFLHKHIDPYVCAGCGKIFENLIGHQAHVQDSCEEQSLAAADCKQLTESEATLGELMVQLEQHELQQQQQQQQQQQQHQQQSAGEEPEQLQVVEQVEQQHEQLVAAANTTELATPLLHSLAEQEDAQQAEIEQYPDKEDPHGKESFSEDSLSTGGQLRMRLSLELTNKLIELYQSHPNLWDPNHLDYHARKQRRQAWHNIAAQLNTFAGSPDRFSWQMLHRKLTDYVKYYRRERQREELAVGGGGEGTRWGFYEAFSFMDDVVPINRVLQKSLQQRDSNLKIIQVYQSYEQLWCTTHPDYTKRKQRLRHLESLCTRLQEECNLQITVERLKSRLIEFRCQYRQCKGARQAALQRNNANWQPTYEYYAALQFLELHVSPFNCERCTASFKRRSDYLRHQRNVHLDQQLNEMQPLQRRRRMRRGTNATNPLEHICHICAMKFSLRTSLQAHLRRHLGQRTHCCTDCPKKFFNSTSLRVHQRSHTKELPYVCEHCARGFVNASKLNQHVKRHTEKRDYPCTRCDKAFYTAHERDRHLRAHLNIRDKVCPYCSRAFVVGSAYYAHLNLHRGEKRYGCAACGKRFAQYAGLYKHRKRCTIAQLQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01322149;
90% Identity
iTF_00499824;
80% Identity
-