Dgla010191.1
Basic Information
- Insect
- Drosophila glabriapex
- Gene Symbol
- FOXG1
- Assembly
- GCA_035042305.1
- Location
- JAWNLN010000066.1:16689889-16691016[+]
Transcription Factor Domain
- TF Family
- Fork_head
- Domain
- Fork_head domain
- PFAM
- PF00250
- TF Group
- Helix-turn-helix
- Description
- The fork head domain is a conserved DNA-binding domain (also known as a winged helix) of about 100 amino-acid residues. Drosophila melanogaster fork head protein is a transcription factor that promotes terminal rather than segmental development, contains neither homeodomains nor zinc-fingers characteristic of other transcription factors [1]. Instead, it contains a distinct type of DNA-binding region, containing around 100 amino acids, which has since been identified in a number of transcription factors (including D. melanogaster FD1-5, mammalian HNF-3, human HTLF, Saccharomyces cerevisiae HCM1, etc.). This is referred to as the fork head domain but is also known as a 'winged helix' [1, 2, 3]. The fork head domain binds B-DNA as a monomer [2], but shows no similarity to previously identified DNA-binding motifs. Although the domain is found in several different transcription factors, a common function is their involvement in early developmental decisions of cell fates during embryogenesis [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-38 3.2e-35 120.0 0.0 2 85 99 181 98 183 0.97 2 2 7.9 7.2e+03 -2.9 1.2 25 39 334 348 318 374 0.54
Sequence Information
- Coding Sequence
- ATGGAGGCGGCACCTGTGTTCCAGTCTAGCTTCTCCATTCGCTCGTTGCTCGCCATGAGACACTCGGCGGAGGAggacaaaagccacaaaaagcCACACACGTCATATCTGAGTTCCAAATGCAGTCACAGTCACGGTCACAGTCTCAATACCAGTACCAGTACCAGTACCAGTACCAGTGCTAGTCCCATGTATTCATGCAACAGTTCGGAGGACGCATCTTCTGAGGATGGCAATGGTAACTCACCCACAACTGGtattggcagctgcagcgaaGGAAGCAAACCGAATGCGAAGCCAGCTTTCACGTACAGCGCCTTGATTGTAATGGCCATTCGCAGGAGTCCAGAGAAGCGGCTGACGTTGAGTGGCATCTGCAAATGGATAGCTGATAATTTTTCGTATTATCAAAATAACAAGAGCGTCTGGCAAAACTCCATACGTCACAATTTAAGTCTGAATCCGTGCTTTATGCGCGTGCCGCGTGCCTTAGATGATCCAGGACGTGGTCACTACTGGGCACTCGATCCATATGCTGAGGACCTTACCATTGGCGAAACAACTGGTCGCCTGCGgcgcaacacacaacacacaaatgcactGCTGAGCCGCACCAGGGCGACAGTGTTGGCAGGTCACGGCAAGACCCGTCCCTATTCGCATCCTTATCAGCAGCTGCCCAGCAATCTAGCCACTGCTACCCTGCAGTATGCGCAGCTTTTCAAGCTGCATGCTGCCTACTTCCCCATTCACCCAGGTGCAGTACACTACATGCCACAGGCACAGCAACAGGCACAGCAAcaggcacagcaacagcagcagccacagccacagcaacagccataTCAGCAACGGGATCCAGTCGTAATGAAGAGCAACCAATTTACATCTTATATTGGTACCGGCACTGGAATTGGTACACGTATGGGTACTTTGCCTATGACAACGTGCAAATCATATCGAtaccagcatcagcatcagcatcagtatcAGGAAACCTTATCGCAATATTACCAACAGTGCCAGGCtgaacatcagcaacagcaacagctacagcaacagcaacagcaacagcaacagcaacagcaacagctgcagcatcgtcacagcaacaaccaatGCAACTAA
- Protein Sequence
- MEAAPVFQSSFSIRSLLAMRHSAEEDKSHKKPHTSYLSSKCSHSHGHSLNTSTSTSTSTSASPMYSCNSSEDASSEDGNGNSPTTGIGSCSEGSKPNAKPAFTYSALIVMAIRRSPEKRLTLSGICKWIADNFSYYQNNKSVWQNSIRHNLSLNPCFMRVPRALDDPGRGHYWALDPYAEDLTIGETTGRLRRNTQHTNALLSRTRATVLAGHGKTRPYSHPYQQLPSNLATATLQYAQLFKLHAAYFPIHPGAVHYMPQAQQQAQQQAQQQQQPQPQQQPYQQRDPVVMKSNQFTSYIGTGTGIGTRMGTLPMTTCKSYRYQHQHQHQYQETLSQYYQQCQAEHQQQQQLQQQQQQQQQQQQQLQHRHSNNQCN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00595759; iTF_00582769; iTF_00576154; iTF_00557022; iTF_00497960; iTF_00570207; iTF_00485669; iTF_00576872; iTF_00499397; iTF_00542249; iTF_00518252; iTF_00564462; iTF_00516802; iTF_00616008; iTF_00501612;
- 90% Identity
- iTF_00516802;
- 80% Identity
- -