Dgau017642.1
Basic Information
- Insect
- Drosophila gaucha
- Gene Symbol
- stc
- Assembly
- GCA_035045545.1
- Location
- JAWNOY010000465.1:5619642-5622925[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.4 1.4e+04 -3.6 0.5 15 18 334 337 333 338 0.79 2 15 1.9 1.9e+04 -4.1 1.6 15 19 361 365 360 365 0.81 3 15 0.055 5.3e+02 0.9 2.0 4 11 394 401 393 402 0.90 4 15 5.7e-07 0.0055 16.8 15.1 1 19 406 423 406 423 0.93 5 15 1.7 1.6e+04 -3.9 0.9 6 10 449 453 448 453 0.88 6 15 5e-07 0.0048 17.0 10.6 1 18 459 476 459 477 0.97 7 15 2 1.9e+04 -6.2 3.9 7 13 481 487 481 488 0.74 8 15 2e-09 1.9e-05 24.7 12.9 1 19 517 535 517 535 0.98 9 15 2.3e-05 0.22 11.7 17.0 4 19 583 598 576 598 0.88 10 15 0.056 5.5e+02 0.8 11.6 1 11 638 648 638 660 0.79 11 15 2.7e-10 2.6e-06 27.4 15.1 1 18 665 682 665 683 0.97 12 15 2 1.9e+04 -4.3 1.2 6 10 712 716 712 716 0.88 13 15 2 1.9e+04 -7.1 8.5 10 18 730 739 720 740 0.74 14 15 5.7e-08 0.00055 20.0 13.7 1 16 776 791 776 801 0.94 15 15 5e-07 0.0049 17.0 13.1 1 19 808 827 808 827 0.96
Sequence Information
- Coding Sequence
- ATGGCCGAGtactggcagcagcagcagcagcaacagcagcaacagcaacagcagcagcagcagctaacaaATGGAGTTGAGGGAGCGGCGTCTACTACAGCTAATGgccacaataataataataattatgtaaattttaatcaatttatcaCACAACACAATTTGGCCAGCTCCTCCAGTCGAGGCTACAATattggcggcggcggcggcgcctTTGGTCTGacgcccagcagcagcgccagcagcagctccaatTTATATGCGCCACACTTTTATGGCAATCAAAATGGCGACAGTTacaatgcaacaacagcaacaactgctgcaTATCCAAGCGTTTATACACCCTTCGGGCCAAATCCATTTGCTGCCTCTGGCTACGACTTTAGCGCTTCCAAGCTGCAGGCATCAGCGCCAGAATTTGTGCCCAACTTTGCAAAGCTCAGTCTGAGCGGGACAGCAACAGAGAATGCCACTGTTAAGAATCATaataacattaacaacaacactgCCACCCAGtcaaatgcagcagcatctGGCAACTCAATGCAGCACAGACAGTCGAAGCCtcagggcagcagcagcagcagcagcggaggcggcggcggcggcggcaacaacaGTCGCCAGCAACGCCGCAACGATTACCGCGAGGACCGCAACGAGGAGCGTTATGAACGTGGCAAGAAGCCGCAGAAGCAACAGCGCTATGATAATCATCGCAGCAATAAGCGACGCGACGACTGGAATCGTAATCGGGATCGCATCAATGGCTATCCACGCGCCGCCGAGGAGCTggacaccagcaacagcaacgacagtGCTCAGACCTCGCCggagaagcaacagcagcagcagctgcaacaaatcTCGCCAAGACGTGCGCCAGATCTGGAGAAGCTGTCGCAGCGCGAGAAGCTAATGCGAGACATAGAGCAGCGCAGGCTCGAGTGCCTGGTCTGTGTGGAGCTGATCAAGGCGCATCATGGCACCTGGTCGTGCCAGAACTGCTATCACGTGCTGCACCTGAAGTGCACCATCACCTGGGCGAGCAGCTCCAAGTCGAACGAGGGCTGGCGCTGTCCCGCCTGCCAGAATGTGCTCGAGGAGCTGCCGCGCGAATATCTGTGCTTCTGCGGCAAACTCAAGAATCCACCGTTGACCCGCAACGAGCTGGCCCACAGCTGCGGCGAGCTGTGCTGCCGCGTCGAGGGCTGCAGCCACGCCTGCACCCTGCTCTGTCATCCGGGTCCGTGCCCGCCCTGCCAGGCGAACGTGAATCGCAGCTGTGGCTGCGGACGCACCTCCAAGCTGATGCAGTGCGCCATGAAGCAGCCGCTGCAGTGCGAAGCCATTTGCGATAAGATCTTGAACTGCAGCGAACATCGCTGCCAGCTGCCGTGCCATGCCGGCAAGTGCGAGGCGTGCGCGGAGCAGGTGGAGCAGCATTGCCATTGCGGCAAGCAGCAGCGCGAGGTGCTGTGCACCCGCGAGACGCAGGACAAGCGCAGCTACTCGTGCAAGGAGTGCTGTGGCAAGCCGCTGCCGTGCGGCAATCACAAATGCAAGGATTCGTGCCATGCCGGCGCCTGTCGCCCCTGCAAGCTGAGTCCCGCCCAAATCACCAGCTGTCCCTGCGGCAAGGTGCCTGTGCCGGCCTCGCAGCGCACCAGCTGCCTCGATCCGGTGCCCACCTGCGAGGGCATCTGCAGCAAGACGTTGCGCTGCGGCAAGCCAGCGCATCCGCATCAATGCGCCAGCAAATGCCATCTTGGCCAGTGTCCACCCTGTCCCAAGCAGACGGCCGTGAAATGCCGTTGCGGTCACATGGATCAGATGATCAAGTGCCGGCAGCTCTCCACGCGAGCGGACGACGCCCGCTGCAAGCGACGCTGCACCAAGAAGCGCAGCTGCGGCAAGCACAAGTGCAATGCCGAGTGCTGCATCGATATAGATCACGCCTGTCCGTTGCCCTGCAATCGAACGTTGAGCTGCGGGCGGCACAAGTGCGATCAGCCGTGCCATCGCGGCAATTGTCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTGTATTGCGAGTGCGGCGCGGAGGTCATCTATCCACCCGTGCCCTGCGGCACCAAGAAGCCCATCTGCAAGCGTCCCTGTTCGCGCACCCACGGCTGCGAGCATGCGCCGCAGCACAATTGCCATGCGGCGGCCGTCTGCCCGCCCTGCATGATGTTCACCACCAAGTGGTGTCATGGTAACCACGAGCAGCGCAAGACCATACCCTGCTCCCAGGCCAGCTTCAGCTGTGGCTTGGCCTGCGGCAAGCCGCTCTCCTGCGGCCGTCACAAGTGCATCCGGCCCTGCCACGAAGGCGATTGCCAGCAGGCGGGCGAACTGTGCCGCCAGAGCTGCACCAAGCCGCGTCCGTTGTGCGGCCACAAATGTGCCGCCGCCTGCCACGAGGGCGCCTGCCCCGAAACACCCTGCAAGGAGCTGGTCGAGGTGCAGTGCGAGTGTGGCAATCGCAAGCAGAACCGCAGCTGCCAGGAGCTGGCCCGCGAGCATAGTCGCATAGCCACCGCTCAGCTGGCCTCCTCCATGGCGGAGATGTCGCGCGGCAACTACATGGAGCTCAGCGAAATCCTAGCGcccaacaaaagcaacaagtcCAACAAAACcttgGACTGCAACGATGAGTGTCGTCTGCTGGAGCGGAACCGTCGCTTGGCCATTGGCTTGCAGTCGCGTAGTTCGGATGCGCCGCTTAAGTCCCTGACGAAGTACTCGGAGTTCTTGCGAGGCTTCGCCAAACGCAACCCGTCGCTGACGAAGAGCGTCTATGAAACACTCAGCGATCTGGTCAAGCTGGCCAAGGAGAGCAAGCAGAAGTCGAGGAGTCACTCCTTTCCCACCATGAATCGTGAAAAGCGGCAGCTGGTGCATGAGCTGTGCGAAGTGTTTGGCGTGGAGTCCGTCTCCTACGACAAGGAGCCCAATCGTAATGTCGTTGCCACGGCGCACAAGGAACGCTGCTGGCTGCCGGCTACGAGCATCATGGAGGTCCTGGCACGTGAGTCCGGGCAGCGTCGCGTGCCCGTGCCCAGCAACAATGCCTGGAGCCTCAAGAAGTAA
- Protein Sequence
- MAEYWQQQQQQQQQQQQQQQQLTNGVEGAASTTANGHNNNNNYVNFNQFITQHNLASSSSRGYNIGGGGGAFGLTPSSSASSSSNLYAPHFYGNQNGDSYNATTATTAAYPSVYTPFGPNPFAASGYDFSASKLQASAPEFVPNFAKLSLSGTATENATVKNHNNINNNTATQSNAAASGNSMQHRQSKPQGSSSSSSGGGGGGGNNSRQQRRNDYREDRNEERYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRAAEELDTSNSNDSAQTSPEKQQQQQLQQISPRRAPDLEKLSQREKLMRDIEQRRLECLVCVELIKAHHGTWSCQNCYHVLHLKCTITWASSSKSNEGWRCPACQNVLEELPREYLCFCGKLKNPPLTRNELAHSCGELCCRVEGCSHACTLLCHPGPCPPCQANVNRSCGCGRTSKLMQCAMKQPLQCEAICDKILNCSEHRCQLPCHAGKCEACAEQVEQHCHCGKQQREVLCTRETQDKRSYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPAQITSCPCGKVPVPASQRTSCLDPVPTCEGICSKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICKRPCSRTHGCEHAPQHNCHAAAVCPPCMMFTTKWCHGNHEQRKTIPCSQASFSCGLACGKPLSCGRHKCIRPCHEGDCQQAGELCRQSCTKPRPLCGHKCAAACHEGACPETPCKELVEVQCECGNRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPNKSNKSNKTLDCNDECRLLERNRRLAIGLQSRSSDAPLKSLTKYSEFLRGFAKRNPSLTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWSLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00472738;
- 90% Identity
- -
- 80% Identity
- -