Dfuy013643.1
Basic Information
- Insect
- Drosophila fuyamai
- Gene Symbol
- -
- Assembly
- GCA_018153365.1
- Location
- JAECXW010000446.1:8267498-8269134[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.9e-16 1.1e-12 47.4 0.0 2 45 352 395 351 395 0.95 2 3 0.027 60 3.5 0.0 28 39 425 436 420 440 0.88 3 3 2.7e-20 6e-17 61.1 0.0 2 42 461 501 460 503 0.96
Sequence Information
- Coding Sequence
- ATGAATCACCTCAAGTGGATGGGACACTCTTCCACTATAATGGATATACAGCGCTCGCTGCGCAACGACAACGGCAGCTGCGAGGTGGTCCTGGCCTCCAGGGACGGTGTCCGAGTGCGCGCTCATCTCTTCGTGCTGAGCACTTGCAGCGAGCTGATGCGAAACCTTCTAGTGGATGTTCCGCGTGGCCAGGAGGCCACCATCGTGCTGCCCGACATCCGTGGAGATCTGCTAGAGAGCATGCTTTCCTTTATCTACATGGGCGAGACGAGTCTGCCCTCTGCCTCGCTGTCCGAGTTCCTGGAGGCCATCAACCTACTGGGCATTAAGTCGGCCATCAGCTTCGAGTGCAATCCCTCGGCCAGTCCGACCAACGCCGCCGATGTGGAGAACAGTCCGATGGCCGTGGAGACGGCCAAGTCGATAACTGGCCTTCAAATCGCAGAGGCGGAGCTATTGGACGAGGAGGAGGAAGAAGAGGCACAGACGGCGGACGCCGTGCCAACCACTGTCCTGGCGGAGGCCCAGCATCAGCCCACCCACTCAAGTCGCTCGCTAGAGTATCTGGATGTGTACGAGCCTCCAAAGATCACCTACTCCATTGAACACATGGACGGCAATTCGAACGGCAATCAGTTTATCCTTACCGAAAACACTGGCACCTTTACCATAACACAGTCGACTACTAGTTTGACCAAGATGGAAGCTGATGAAACGGTCACCAGTGGCGCTGAAGTTGAGCTGGTCGACGATGATGTGGACGCGGACATCACTGAGGATTCAGAGGAGCAGGAAACACAGATGATCGAGGAGGAGTTCGCGCAAACCGATCCACTGATCGAACTAAGTGCCGCTACTGAACTAGACGACGACGAGGACGCGCACGACGACCTGGCCGACGAGGAGATAGAGGACGAGAAGCCTCGCAAGTTGGGCGGAGGAAAGCCGCGCCCTCGTCGTCCTGTTAATACCAAATCCCCTAAGCGACTGCCCAGTAAGCCAACGCGACTGCAGCAATTTGTGGCGCTCAAGAGGGAAGTGAAGGACGATATCAACGACGCTTTGGATCTGGCGGCGGACGCAGTGATCATCGAGGGATTGAGCCTGCAGAAGGCCGCCGACCGATTCGACATCTCTAAGACGGTCCTTTGGCGCCGTGTGCGCAACAATCCCGCCTACATGCGGAACAACCGGGAAAGACCGTCGCTGCTAGAGGCTTACGAGCGCCTAAAGAACGGGGACTCCCTGAAGAGCATCAGCACGGAACTGCAGATTCCCATGTCCACGCTGCACCGGCACAAGATGCGCCTATCGGCCCAGGGACGCCTGCCCGACTTCGTGGCCTGCCGCCGGCGGGATACCACTCCCAAGGACGAGCTGCGGGACAAGTTGGCCAAGGCCGTGCATGCCTGCATGAACGAGGGAATGTCCCAGAACCACGCGGCCAACCTCTTCGAGATCCCCAAGAGCACGCTATGGCGACACCTGCAGCGACGCATGAGCAACGGCGATCGAAAGGTCAAAAAAGAGCTGCAGGACGAGTACGAGGACGATATGCTAACCTAG
- Protein Sequence
- MNHLKWMGHSSTIMDIQRSLRNDNGSCEVVLASRDGVRVRAHLFVLSTCSELMRNLLVDVPRGQEATIVLPDIRGDLLESMLSFIYMGETSLPSASLSEFLEAINLLGIKSAISFECNPSASPTNAADVENSPMAVETAKSITGLQIAEAELLDEEEEEEAQTADAVPTTVLAEAQHQPTHSSRSLEYLDVYEPPKITYSIEHMDGNSNGNQFILTENTGTFTITQSTTSLTKMEADETVTSGAEVELVDDDVDADITEDSEEQETQMIEEEFAQTDPLIELSAATELDDDEDAHDDLADEEIEDEKPRKLGGGKPRPRRPVNTKSPKRLPSKPTRLQQFVALKREVKDDINDALDLAADAVIIEGLSLQKAADRFDISKTVLWRRVRNNPAYMRNNRERPSLLEAYERLKNGDSLKSISTELQIPMSTLHRHKMRLSAQGRLPDFVACRRRDTTPKDELRDKLAKAVHACMNEGMSQNHAANLFEIPKSTLWRHLQRRMSNGDRKVKKELQDEYEDDMLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00605685;
- 90% Identity
- iTF_00494306;
- 80% Identity
- iTF_00512112;