Basic Information

Gene Symbol
Rel
Assembly
GCA_018153365.1
Location
JAECXW010000408.1:382398-385596[-]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.5e-54 2.5e-50 170.8 0.3 1 168 146 328 146 329 0.95
2 2 2.7 1.2e+04 -4.0 0.0 37 61 608 632 603 639 0.68

Sequence Information

Coding Sequence
ATGAATCAGTACTACGACCTGGACAAGGGCAAAAATGTGCTCTTCATGAACGATGCATCCAGCACGAGTGGCTACAGCAGCGGCAACTCCCCCACCTCGACCACCCAGTCCTTGTCGCCCGCCCACTCGCCCGAAACAATTGCCCTCCAAACGGATTTCGCCAATCTCAACTTGCCAGCCGGCAACTCACCACAGCCGCCGCCGCTGCAGAACTCACCATACCAGCATCAGCTGTTGAACAACAGCGGTCTCGGCCAATTGGATGCCAGTAATTTGATAAATTCCGCTGCCGTTGCGAACGCCACGAGTTTCGGCAACATGTACATGGATCATCAGTACTACGTGAGCGCGCCAGCTGCAGTGCCTCCTGGACAGCATTTTGGATACCACCAAAACGGCCCGGCAGCTGGCAGCGATAACAAACACGTGCCGCAGCTAAGGATTGTGGAGCAGCCGGTGGAGAAGTTCCGGTTTCGCTACAAGAGCGAGATGCACGGCACACATGGATCCCTGAATGGGGCCAACTCGAAGAGGACGCCCAAAACCTTCCCGGAGGTCACCTTGTACAACTACGACGGTCCTGCCGTCATCCGCTGCAGTTTGTTCCAAACCAATCTGGACAGCCCCCACTCCCATCAGCTGGTGGTGCGCAAGGACGAGCGGGACGTGTGCGACCCGCACGATCTGCACTTGTCCAAGGATCGCGGCTATGTGGCCCAGTTCATCAACATGGGTATCATACACACCGCCAAGAAGTACATATTCGAGGAGCTCTTCAAGAAGAAGCAGGATCGCCTGGTCTTCCAGATGAACCGTCGCGAGTTGTCCACCAAACAGGTGCAAGAATTGCACCAGGAGACGGAGCGGGAGGCCAAGGACATGAATCTTAACCAGGTGCGTCTCTGCTTCGAGGCATTCAAGATCGAGGACAATGGCACATGGGTTCAACTTGCTCCGCCTGTGTACAGTAATGCGATTAACAACCGGAAGTCCGCCCAAACCGGAGACCTACGCATCGTCCGGCTGAGCAAGCCCACAGGCGGAGTCATGGGCAACGACGAGCTTATACTGCTGGTGGAGAAGGTCAGCAAGAAGAACATAAAAGTGCGCTTCTTTGAAGAGGACGAGGATGGCGAAATCGTGTGGGAGTCATATGCCAAGTTCCGAGAATCGGATGTCCACCACCAGTATGCCATAGTGTGCCAGACGCCCGCGTATAAAGATAAGGACGTGGACCGCGAGGTGGTTGTTTCCATTGAGCTGTTACGGCCGTCCGACGACGAGCGGTCTTTTCCACCGCTGCCCTTCCGCTACAAGCCGCGGGATGCAATCGTGTCAAGGAAACGCCGTCGCACCTGCTCATCGGCCAACAGCAGCAGTTCCGGCAATGCCAGCTCCAATAATTCGCTGGATCTGCCCAAAACTCTGGCCTTGGCGCAGCCACCGAACGGGGCAACCTCGCATCACGATCAGACAATCAGTCAGGAGTTTGGACGCTATCATCTTGATGATTTGTTGAATTCCGATCATTTTCGTAAAATTATAGAACACAACTCTGTCGAGCTGGAGAAGATCTGCGATCTGGACATGGGCGAGTTGCAGGAGGATGGCCATGGGCGATCTGAAGGACCATCAAGCCGAAACCTCACCATTAAGTACTTGAGTGCTATATTCAAGATCTTTGATCAGGATCGCCGAACAAGGTGTGAGAGCTCGCGCCGCCAAGTGGAGGAATTGTTTACAAACCACGCTCTGCAAAATGACAATAATGATACGCTACTGCACGAGGTGATTAGCTACAAAAAGGACAACCTGAAGTTGGCCTTCAAGACGATACAGGTGATGAACTACTTCAAGCTGAGGGAGCTGGCCAACAGTGCATTGAATGCGGACGGAGACAGTGCGCTTCATGTGGCCTGCCAGCAGGATCGGCCGCACTACATACGACCTTTGTTGGGCCTAGAGTGCAGCCCCAATCAGCAGAATCATGCGGGCAATACCCCTTTGCATTTGGCCGTCAAGGAGGAGCGCATGAACTGCGTGGAGAGCTTTCTGAACGGAATGCCCACTCTGCGATTGGATCTCTCGCTGAAGAACGACGATGGGCTGACCCCATTGCACATGGCCATCCGGCAGAACAGGTACGATGTGGCCAAGAAACTGATTAGCCATGACAGGAGTTCGATTAGCGTAGCCAACACAATGGATGGTAATAATGCTCTGCACATGGCCGTTCTCGAGCAAAGTGTAGAGCTGCTGGTGCTCATCTTGGATGCCCAGAATCAAAACCTCACCGACATCCTGCACGCCCGAAATGCAGCCGGCTACACCCCGCTCGAATTGGCCAGGCACAAGGCCAACGAGCGGGTGGTGCAGCTGCTGGAGAAGGTGTATCCGGAGAAGGGTGAACTGGCCATGACCTGGATTCCGCGCAAGGTCAAGGAGGAGATAGACTCGTCCTCAGACGAGAGCAGCGATGCTGGGCAGCTGGAGATCAAGTCCGAGGAGATGGATATCAAAATAGAGGACGAGGACCCCATGGAGCTGGATTTAAGCAGCAGTCGACGAGGCCGCGACTCTGAAGACACCGAAATGAACCCGGAACCGCGGCACAAACTGCAGTTGCTGCTCAAGAACAAATCCCTGTATGACCAGCTCAGTTCGCTGCTGAACGAACCCGTGGGACATGGGCTAGATCCCAATCTGGCGAAGTGGAAGCGGGTGGCCCGCCAATCCAATCTGGAGCAGTTCATCTGCCTGTGGCTGACAGCTGATGGCCTTTTGGATCATATTATGGAAGACGGCGCCAGCGTGGAAATAGCCGCATTTATCCGCGCCCTCCAGACAATCGAGCCCCAGGCGTACGCCCTACTGGATCGAGATTTACATTAG
Protein Sequence
MNQYYDLDKGKNVLFMNDASSTSGYSSGNSPTSTTQSLSPAHSPETIALQTDFANLNLPAGNSPQPPPLQNSPYQHQLLNNSGLGQLDASNLINSAAVANATSFGNMYMDHQYYVSAPAAVPPGQHFGYHQNGPAAGSDNKHVPQLRIVEQPVEKFRFRYKSEMHGTHGSLNGANSKRTPKTFPEVTLYNYDGPAVIRCSLFQTNLDSPHSHQLVVRKDERDVCDPHDLHLSKDRGYVAQFINMGIIHTAKKYIFEELFKKKQDRLVFQMNRRELSTKQVQELHQETEREAKDMNLNQVRLCFEAFKIEDNGTWVQLAPPVYSNAINNRKSAQTGDLRIVRLSKPTGGVMGNDELILLVEKVSKKNIKVRFFEEDEDGEIVWESYAKFRESDVHHQYAIVCQTPAYKDKDVDREVVVSIELLRPSDDERSFPPLPFRYKPRDAIVSRKRRRTCSSANSSSSGNASSNNSLDLPKTLALAQPPNGATSHHDQTISQEFGRYHLDDLLNSDHFRKIIEHNSVELEKICDLDMGELQEDGHGRSEGPSSRNLTIKYLSAIFKIFDQDRRTRCESSRRQVEELFTNHALQNDNNDTLLHEVISYKKDNLKLAFKTIQVMNYFKLRELANSALNADGDSALHVACQQDRPHYIRPLLGLECSPNQQNHAGNTPLHLAVKEERMNCVESFLNGMPTLRLDLSLKNDDGLTPLHMAIRQNRYDVAKKLISHDRSSISVANTMDGNNALHMAVLEQSVELLVLILDAQNQNLTDILHARNAAGYTPLELARHKANERVVQLLEKVYPEKGELAMTWIPRKVKEEIDSSSDESSDAGQLEIKSEEMDIKIEDEDPMELDLSSSRRGRDSEDTEMNPEPRHKLQLLLKNKSLYDQLSSLLNEPVGHGLDPNLAKWKRVARQSNLEQFICLWLTADGLLDHIMEDGASVEIAAFIRALQTIEPQAYALLDRDLH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00565154;
90% Identity
iTF_00587913;
80% Identity
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