Dfun014346.1
Basic Information
- Insect
- Drosophila funebris
- Gene Symbol
- -
- Assembly
- GCA_018901825.1
- Location
- JAEIFK010000678.1:25066772-25072654[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.044 3 8.4 0.2 1 23 1274 1297 1274 1297 0.94 2 13 7.1 4.9e+02 1.4 0.2 1 23 1456 1478 1456 1478 0.91 3 13 0.00016 0.011 16.1 2.7 2 23 1481 1502 1481 1502 0.97 4 13 6.2e-05 0.0042 17.4 0.2 3 23 1510 1530 1508 1530 0.98 5 13 5.1e-07 3.5e-05 23.9 4.1 2 23 1537 1558 1536 1558 0.97 6 13 4.6 3.1e+02 2.0 0.4 5 23 1571 1589 1568 1589 0.95 7 13 1.2 82 3.9 5.4 3 23 1596 1617 1594 1617 0.93 8 13 0.13 8.7 6.9 0.2 2 23 1628 1648 1627 1648 0.96 9 13 4.9e-05 0.0033 17.7 0.4 1 19 1654 1672 1654 1676 0.95 10 13 1.4e-05 0.00095 19.4 0.5 1 23 1684 1706 1684 1706 0.98 11 13 9.2e-05 0.0062 16.8 7.6 1 23 1712 1734 1712 1735 0.96 12 13 0.00018 0.012 15.9 5.9 1 23 1740 1762 1740 1762 0.98 13 13 0.025 1.7 9.1 8.2 1 23 1768 1790 1768 1791 0.95
Sequence Information
- Coding Sequence
- ATGGTTGACAGTGTGCAGTGCCCCGTGTGCACCTTGTACTTGCACGCGGGCATGAATCTCTCTGATCATTTGGAGACGCATCCCAAGGAACAAGTTATCAAAGCCCTGGTGCAAATGACAATCGTCGGCAACAATGCATTGGGCGGCGCCCTGGTGGCAGCTGCGCTCTCCACTGCCGGCAGTGGTGCATCATCAGACGGTGCCTCCTCCTCATCCCCGCCTGAAACTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTTCATGGATTTCCACGTGGCGCAACAACGATGCTGGTTATACCACAAACAACACAACAACAGCATCATTTCCTGGCCACTCAACAGCCTGGTCATTTTTCCCATCAGCAGCAACAGCAACAACAGTCGGCTATGAAGTACACGTATGCAACTACGTTACCTCCACCACCTCCGCCTCTACAGCTATTTGCACAGCAGCCGACGACATCGCAGTCACATCAGAAGCCACCGCCCGCCTATGGCGCCGCCATCAGTCAAATTCGATCTCAGCACAACCAAAATAAGCAACAGCAACAACATATAACCGTACAGCATAACGTTAACCTAGCACCACCGAGTGGGAAACACAGTAAATCCCATACGGAGATCTTTTTGAATCCACCACCGCCACAGTCAACGATGCCGTCTTCGTCGACCTCCTCTTCAAGACTGCAGCATTCACAACAGCACCAGCAATCCCTTGCAGCCGGTAGCAGCTATGCGACAGCCAGCTGCTCTAGCTCCTCATCGAGCCTGATGTCAACGACAACCGGACGAGCCAGCTGTCGCCAGTCGACCAATTCACCATTTGGTGCACTGCTAAATGCGGCAGCGCAAGCAGCCAGCTCCTCGACCGCCTCCTCCAGCGCATCTGTGCTGCGATACGCTGAATCTCCAGTTGCTCACTATCTGGAGCGGGATAATGGCGACTTTATTGTCCAAGAAACGCCCAAACACATTGTCGAATGCGTCGAGAAAGATGACGGCGAATTCTCAGTGATTGAGCGCATCTATCAGTCGCCACCCAGCGTGTTGCACATACATGACGATGACGAAGAAGACGAGGAACACAGCTGGGCAAATAGTGACGATGAGGATCACGCTAAGACACATAATAATGTGGAGGATGGTGATGACGAGCGTGAAGACAGCCGCAGCAGAGTTGGCCTTAAGACGATAACGAAAAAGCCGCGAAAGACAAAATTGGGCGGCAGGATGCATAAAAGGGCGCCTAAGCATCTGATGAGAGCTACGGAGGAAGAGGAAGAGTTCATGAGTGTGGGCAGCAGTGAAAACGAAGAACAGGCAGAGGAGCAGCCGAAAACATCAGGTGGTGCACAGGTGGCATCGCCCACTCTTCCACAACTTTGCACTGCACCTTCTACGAGCAGTGGAGCTTCTCCTGCCACCTCTGGCACAGTCAATTCAACGTCCAACGCTACCATTAAGTCCAAAAAGAATCGCGTTACGGTTCTCAGTGATGTGCCGCTGAATATGAACGAGTATCTGGATCTGGTGGGCAACATTGTGGCTTCGAGCCGCATTGGTGCTGCTCGTCCGTTTGCCGCTGTAGCGCCCATTCCGTTGGTCAAGGTGGAAAAAGAGGAACCGCTGGACGAATATGATAACGTTCAGACAGAGATTCAATCCATGGAACAAAAGCCTAGCCTGGAACATGGCAGCGGCAGCAATAGTAGTAGCAGCAATGGACACGGCACCACCAGCGTCATACGCATGGCCAGCACAAGCAGTAGTACTAATGTTCCGGCCGAGGATCTCACACAACCGCCACCTATGAAAGTCGAGGTAGAGCCAACAATGCTGCTGCCACAGCGCTTCTCAGCACCGGCCCAGCAGCGTGGTCCCAAAAAGTTAGTCATCAAACCAAAGGCCACAGCAATGGCGGCGGCGACGGCGACAGCGACTGCGACGGCGACTAAAAAGACTGATAACAATGCTGCCAGCATCAGAAGCAGCAACTGCGCCGAATCTCTCAGCATATCAAAAGCATCTGCAGATCTGGTACAGATCAAAAGTGAGAATATGGAAGCGTCGACATCGAGTGGAAGCATCCTTGAGAAGCATCTGACCACCAGCTTTAGTGGCCAACAAGCGCGCAAGCACTCCTCCGTCAACGACGACGATGCACGCGTGCTGCTTGAATTTGCTAACTCGAAGCAACTTCCGCTAGCGGGAACCAGCAATCCCACAACATTTGTGGTGAATGCGGCTAGTTTTGCTTCGGCGGGCTCCGTATTTGCCAACAACTTGCAGAAGCCAATCAATCCGGGTGACGAGTACATTCTGCCTGATGATAACAAAGTGGAAATTGATGAAATTGTGATATCCTCTTCGTCTTCCTTTGCCTCCTCCACGCAGCAACAGCAGCAGCAGCATCAACAAGCAGCTCCGCCAGTTCAAGCTTCGCATTCGGCATTGCAACAGCCACAGCCGCCTACCTTCAATGACTTCAACTTTCTGTACCACCAAAATACAACGACACCGACGGCTTCCAACTTTGTCCCATTCGGTCTTCAACATCAGCAGCAACAACACGGTTCCAGCGAAGCCACCAATGCAGCGACACTCGCATCTTCTTCCAGCAACTCGTCAGCATTAGATCACGAGTCCTCCATGAATGCAACGTTCCGCGTGGCCAAACCGCAATCATCGCTGAGTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGACAACCTCTCAGAACGAGGAGCAGTCGAGCAATTTTATTGCAGCACTGGCAGCCGTCGATTGCTGCAGTGTGGCTATGGACAGTGACGCAAGTGATGCAAAGTACTTGGATCTGGATGCATGTAAGCGGGAACAGTTGAGTAATAGCAGCAGCCATTTGCCCTCTGCATCGGCATCCACATCCACAACATCGTCTTCATTTGCTGCTGCAGCGACAGAGAGTAGCCTCGTTGGTGGCCTAGGATTGAACATTCGAACTGATGAGAAGATGCCTGCGAAGGGTGAAATTTCTGAGCAGGAAAGCAACTGTGACATTGAGAACTCTTGGAGTCAATCGATGTATGGTGACATATCCCAGCGGTACTTTAGAAATCAATTTGCGGATGGGTATAATCAACAGCTGACCGAATGGCGCCAGGACTATTATCCTGCGCAAGATCTCAGTGGTCAGCAGCAGCAGCGTGAGCACAAACGTTTTGATTTCAATGCGGTCGCCTCCGAGTATGCACAACCGGGTGAGATGGACGCCTCCTCGAGCTCTGCTAGAAGCAATCAATTGCTGGATCTACAGCCCACCACGTCCACGTCGTCATCGGCTTTGCTGGCTGGTCCACCAATAGCCTCGACATCCAGAGCTGCCGCCGAAGCGGAGGCAGTCGCTGCAGCTTTGCAACGGAAACCCGCGCGTCGCAAGATCTACAAATGTCCACACTGCGTGGCCATCTTCGAGAAGCTAAAGGAGCGCAATGCTCATATGATTGGAGAGCATAACTATGTACGTCAGAATCGCAGACTCATTTGTACACAGGCGTTGGTCAATGCTGCCATGTTATCACAGCCTCAGGTTCACCAACAACAACAGCAGCAGCTGTTACTGCAAGCAGGTGGTAACATTAGCGAAGCCCTGCAAGAAGATTCCAAAGATGGTATTGTGAAGATCAAACAGGAGCATTGCCAGGATAAACCCGATTCATCGGAACAGCTGCTCGATCATTTGGAGTTGCCGGATGTAAAAGATGCAGACTTATTAGACGTTAATGGTGTGAATATACGTGATGCGGACATGAAGCCTTCCACCAACGTGACTGATTTGAAGCCGACTATGACGCCGTTGGCTATGACCACCCCGGCTGCCAAGTTGGCGGCTATTTATCGCATGCTCATTGCCTATAATGAGTCGAAACTTGGCCAGGATCATCACAATCTCAGCGAGCTGGAGCAAAAAGCAATGGAGAAATCTATATTTCTATGCTACGTCTGTCGCACCGATTTCCCCTCTGTAAAGCTCTACGATGCGCATCTTACTGAGCATCCAGCCGAGTGCTTCACCTGTGGCAAGAAATTTTATCGATGGAAAAATTTCTCACTGCATCTGAAACGTCATCTCGGCTGGAAGGAATTCGGCTGTTATGTCTGCGATAAGAAATTTGTTGTGCGCAGTGCCCTAGTCGAGCATATGCGGATGCACACTGGTCAAACTCCGTTGAAGTGTAAAATATGCGGTAAAAAATTCAAGCGTTACTCCAACTTGACTCAGCATCGAAAGCGGCACACCAAAATGACGGTGCGGAAGAAGGAATATGTGTGTCACTGCGGCGAGGTGTTGCCTTCGAAAGCGCGATTCCTGTGGCATAAAGAAACGCATGATTTGAAGCCCAAGTGCTGTCCGTATTGCTGCGATCGTTTTGTGCATGCCAATTCACTGCGCCGACACATCCGGCTGGCACATTCGGACAAGTTTGACTATGCTGAGCCCATGGAATGCCCCATGTGCAAGCAGATTTTTGCCAAAACGTCCATTAAGGCACACATGGCCACGCACTCGACGGATCCCCAATACGATTGCGCCATCTGCAATAAGAGCTTCTCCACAAAATGGAATCTCAAGATACATTCTTGGGTGCACGCCAATCGCACTGCCAAACCGTTCAAGTGTGAGTACTGCCCAAAAGCCTTTGTACGTGAGCTGGACTTCAAGAACCACATGAATGCGCACAAGCAGATTAAGCCCTATACCTGCGAATACTGTGGTTGCAAGTTCATTCGCAAGTACAATTACATGCGGCATCGACGAGAGCACCATGGCAACAAGAAGTTCACCTGCGACCAGTGCGACAAGTCTTTTCATCGGCACTACTATCTAATTGAGCATCGGCGTATTCATACTGGAGAACGGCCTTTCCATTGCACCATCTGCGGGAAGAGCTCCACCACAAAGACCAATCACAACAAGCATCTGAAGATACACCATTCACGAGATCCGTTTACCGTGGAGGTCTAA
- Protein Sequence
- MVDSVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIVGNNALGGALVAAALSTAGSGASSDGASSSSPPETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHGFPRGATTMLVIPQTTQQQHHFLATQQPGHFSHQQQQQQQSAMKYTYATTLPPPPPPLQLFAQQPTTSQSHQKPPPAYGAAISQIRSQHNQNKQQQQHITVQHNVNLAPPSGKHSKSHTEIFLNPPPPQSTMPSSSTSSSRLQHSQQHQQSLAAGSSYATASCSSSSSSLMSTTTGRASCRQSTNSPFGALLNAAAQAASSSTASSSASVLRYAESPVAHYLERDNGDFIVQETPKHIVECVEKDDGEFSVIERIYQSPPSVLHIHDDDEEDEEHSWANSDDEDHAKTHNNVEDGDDEREDSRSRVGLKTITKKPRKTKLGGRMHKRAPKHLMRATEEEEEFMSVGSSENEEQAEEQPKTSGGAQVASPTLPQLCTAPSTSSGASPATSGTVNSTSNATIKSKKNRVTVLSDVPLNMNEYLDLVGNIVASSRIGAARPFAAVAPIPLVKVEKEEPLDEYDNVQTEIQSMEQKPSLEHGSGSNSSSSNGHGTTSVIRMASTSSSTNVPAEDLTQPPPMKVEVEPTMLLPQRFSAPAQQRGPKKLVIKPKATAMAAATATATATATKKTDNNAASIRSSNCAESLSISKASADLVQIKSENMEASTSSGSILEKHLTTSFSGQQARKHSSVNDDDARVLLEFANSKQLPLAGTSNPTTFVVNAASFASAGSVFANNLQKPINPGDEYILPDDNKVEIDEIVISSSSSFASSTQQQQQQHQQAAPPVQASHSALQQPQPPTFNDFNFLYHQNTTTPTASNFVPFGLQHQQQQHGSSEATNAATLASSSSNSSALDHESSMNATFRVAKPQSSLSAXXXXXXXXXXXXXXXXXXPTTSQNEEQSSNFIAALAAVDCCSVAMDSDASDAKYLDLDACKREQLSNSSSHLPSASASTSTTSSSFAAAATESSLVGGLGLNIRTDEKMPAKGEISEQESNCDIENSWSQSMYGDISQRYFRNQFADGYNQQLTEWRQDYYPAQDLSGQQQQREHKRFDFNAVASEYAQPGEMDASSSSARSNQLLDLQPTTSTSSSALLAGPPIASTSRAAAEAEAVAAALQRKPARRKIYKCPHCVAIFEKLKERNAHMIGEHNYVRQNRRLICTQALVNAAMLSQPQVHQQQQQQLLLQAGGNISEALQEDSKDGIVKIKQEHCQDKPDSSEQLLDHLELPDVKDADLLDVNGVNIRDADMKPSTNVTDLKPTMTPLAMTTPAAKLAAIYRMLIAYNESKLGQDHHNLSELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMTVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTDPQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHMNAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKKFTCDQCDKSFHRHYYLIEHRRIHTGERPFHCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00537699;
- 90% Identity
- -
- 80% Identity
- -