Dfun016637.1
Basic Information
- Insect
- Drosophila funebris
- Gene Symbol
- Lrrfip2_1
- Assembly
- GCA_018901825.1
- Location
- JAEIFK010000301.1:101375-105536[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-76 3.7e-72 243.0 12.6 93 299 10 206 8 207 0.99 2 2 0.27 2.2e+03 -2.5 0.2 210 230 226 245 210 268 0.58
Sequence Information
- Coding Sequence
- ATGTACAATTATTTGTTATTTATATCACAGGAAGTCGAAGAACGTTTCCGGAAGGCAATGATAACAAATGCTCAATTGGACAATGATCGGTCATCTCAAACCTATGAAGTCAAATTGTTGAAGGATAAAAACGAAACTCTGCAGGAGTCTTATGCCCAATTGCAGCGTGAGCTTAAAAACAATTTACATGATTTTAACGAAGTTAAACGTAATTTGGACCGCGCAACCCTTGAATTAAGCTTGGTGCAAGGTCAATTATATGAACGCGATGCGCTTATAGCAGAGCACGGTCTTGTTATTGTAGCCATTGAGAATACTGACGGAAGTGATGCAAAAAGAGCATTAGTTAGTATTGAGAATGCCAATTTTTTGGCGACCGTTAAGGGATCGCTTGATGTAAGGCTTAAAAAGTTTACAGAGGAAAAACAGCGACTTTTAATGGAAGTACACGCGCTTCGTGAACAGTTAGATACTTTTAAGAATGAAGGCAGGACCGGACGCTGTAGTTCGTTGAATGGCTCCTGGGGATATGATGCAGATTATGTTGTTCAAAGAGAAGCAAATAAGACAGTATCAGATTATAAATACAAATTGCAAAAGGCTGAACAGGAAATCGCTAATCTACAAGCAAGCTTATCACGTTCGGAGTCGCAAGTTATTCGATATAAAAGCTCGGCGGAAGCAGCAGAGAAAGTAGAGTCAGAATTGAAAGTGGAGCGGCGCAAACTGCAACGTGAGGATGTGGTTCACCACTCTGTGTACTTGCTACACTGTGCCACAACCCGCTCGAAATCCAAATTGGTGCTCAGGCAATGCAAGCTTAAAAACATTCCAGCTCAGACACTTTCGACACAAATAGTCTTTCCCATACTTTCGTCAAAGAAGGTAGGAGACTCTGGCTTTCCAGGCTATCCATTCCACTTCACAGGATAG
- Protein Sequence
- MYNYLLFISQEVEERFRKAMITNAQLDNDRSSQTYEVKLLKDKNETLQESYAQLQRELKNNLHDFNEVKRNLDRATLELSLVQGQLYERDALIAEHGLVIVAIENTDGSDAKRALVSIENANFLATVKGSLDVRLKKFTEEKQRLLMEVHALREQLDTFKNEGRTGRCSSLNGSWGYDADYVVQREANKTVSDYKYKLQKAEQEIANLQASLSRSESQVIRYKSSAEAAEKVESELKVERRKLQREDVVHHSVYLLHCATTRSKSKLVLRQCKLKNIPAQTLSTQIVFPILSSKKVGDSGFPGYPFHFTG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -