Basic Information

Insect: Drosophila formosana
Gene Symbol: stc
Assembly: GCA_035045625.1
Location: JAWNOW010000311.1:12086647-12090106[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.5 1.3e+04 -3.7 0.5 15 18 385 388 384 389 0.79

2 16 2 1.7e+04 -4.1 1.6 15 19 412 416 411 416 0.81

3 16 0.041 3.5e+02 1.3 1.6 4 11 445 452 444 454 0.91

4 16 6e-07 0.0052 16.7 15.1 1 19 457 474 457 474 0.93

5 16 1.8 1.5e+04 -3.9 0.9 6 10 500 504 499 504 0.88

6 16 7.8e-08 0.00067 19.6 13.8 1 18 510 527 510 528 0.98

7 16 2 1.7e+04 -6.2 4.1 7 13 532 538 532 539 0.77

8 16 2.1e-09 1.8e-05 24.6 12.9 1 19 568 586 568 586 0.98

9 16 0.25 2.2e+03 -1.2 1.2 5 10 616 621 616 621 0.96

10 16 3e-05 0.26 11.3 17.5 4 19 634 649 627 649 0.88

11 16 0.068 5.9e+02 0.6 11.8 1 11 689 699 689 711 0.79

12 16 2.9e-10 2.5e-06 27.3 15.1 1 18 716 733 716 734 0.97

13 16 2 1.7e+04 -4.4 1.2 6 10 763 767 763 767 0.88

14 16 2 1.7e+04 -6.6 8.7 10 18 781 790 770 791 0.76

15 16 7.1e-08 0.00062 19.7 14.0 1 16 827 842 827 852 0.94

16 16 5.5e-08 0.00048 20.0 13.0 1 19 859 878 859 878 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.5	1.3e+04	-3.7	0.5	15	18	385	388	384	389	0.79
2	16	2	1.7e+04	-4.1	1.6	15	19	412	416	411	416	0.81
3	16	0.041	3.5e+02	1.3	1.6	4	11	445	452	444	454	0.91
4	16	6e-07	0.0052	16.7	15.1	1	19	457	474	457	474	0.93
5	16	1.8	1.5e+04	-3.9	0.9	6	10	500	504	499	504	0.88
6	16	7.8e-08	0.00067	19.6	13.8	1	18	510	527	510	528	0.98
7	16	2	1.7e+04	-6.2	4.1	7	13	532	538	532	539	0.77
8	16	2.1e-09	1.8e-05	24.6	12.9	1	19	568	586	568	586	0.98
9	16	0.25	2.2e+03	-1.2	1.2	5	10	616	621	616	621	0.96
10	16	3e-05	0.26	11.3	17.5	4	19	634	649	627	649	0.88
11	16	0.068	5.9e+02	0.6	11.8	1	11	689	699	689	711	0.79
12	16	2.9e-10	2.5e-06	27.3	15.1	1	18	716	733	716	734	0.97
13	16	2	1.7e+04	-4.4	1.2	6	10	763	767	763	767	0.88
14	16	2	1.7e+04	-6.6	8.7	10	18	781	790	770	791	0.76
15	16	7.1e-08	0.00062	19.7	14.0	1	16	827	842	827	852	0.94
16	16	5.5e-08	0.00048	20.0	13.0	1	19	859	878	859	878	0.96

Sequence Information

Coding Sequence: ATGGCCGAATATTGGCatcaacagccgcagcagcgacagctccATGCAAATAGCGATTTGGCAGCTCGAGATGAGTCAGCTGCTGCATGCAACGGAGGCAACAGCGTCAACGGGGACACCGCGGAGCCCATTGccacaggcaacaacaataacaactatgTTAACTTTAATCAGTTTATCACGCAACATAATCTGGCCAGCCCGAATCTGAGTTACAGCATTGGAGGGGGTGGCGGTGCCTTTGGACTGATGCCGAATAGCAGCACCATTGCTAACTATGGTGGAGTATATCCACATCCCTTCGTCGGCTATCAAAATGGTGAAGGAGCGGCAAGCGGGAGCGGTGGTTCTTCCAAAAACTTTCAAGAATTGTCGGGGCACTCGAATGCTTACTCAGCTCTGGACAGCAATCCTTTCGCCTCCGGCAGCAGTTTTGATTTTAGTAACTCCAAGCTACAGGTGTCGGCTCCAGAATTTGTGCCTAATTTTGCCAAGCTCAGTTTGAGGGCTTcaccagcaacggcaacatgtTCGGAATTGGGACTGCAGTCGCctagttgcagcaacagcatcaacaaccaCAGTCACAATCAACACCACATCCACAGTAaattcaataacaataacaataacaataacagcacTGCCATCCAAGCAAACAGTGAAACAAACAACGAATCGCAAACTCTCAATaataatcatcatcagcagcagcagccccagcagcaacatcatcatcaacaagcCCAGTTGCCAAAGGCACATGGCTCCAACAGTCGCCAGCAGCGACGCAATGATTATCGAGAAGGTCGAATCGACCGGAATGAAGATCGCTATGATCGAAAGAAGCCGCAGAAGCAACAGCGCTATGACAATCATAGGAGTAATAAAAGACGCGACGATTGGAATCGCAATCGAGATCGCATCAATGGCTATCCACGTGCCACCGAAGAGCTTGACACAAGCAATAGCAACGATAGCGCCCATCCATCGCCggagaagcagcaacagcagcaaatctCGCCGAGACGTGCTGGGCCGGACCATGAAAAGCTGTCGCAGCGAGAAAAACTCATGCGAGATATTGAGCAAAGGCGCCTAGAGTGTCTCGTGTGCGTGGAACTAATCAAGGCACATCATGGCACATGGTCGTGCCAGAACTGTTATCATTTGCTCCATCTCAAGTGTACAATCACTTGGGCCAGCAGCTCCAAGTCAGCGGAGGGCTGGCGGTGTCCAGCCTGTCAGAACGTGCTGCAGGAACTGCCGCGAGAGTATTTGTGCTTCTGCGGCAAACTCAAGAATCCACCATTGACGCGCACCGAACTGGCGCATAGCTGTGGTGAACTCTGCTGCCGGGCCGAGGGCTGCAGCCATGCGTGCACATTGCTGTGCCATCCGGGGCCATGTCCGCCGTGTCAAGCGAATGTGAGTCGCCGCTGCGGCTGCGGACGAACAAACAAACTAATGCAGTGTTCTATGAAGCAGCCGTTGCAGTGTGAAGCGATTTGCGATAAGCTGCTCAACTGCAGCGAGCATCGATGCCAGCAAATTTGTCATGTGGGCAAGTGCGAGCCTTGCGGGGAGCAGGTGCAGCAGCACTGTCACTGCGGCAAGCAGCATAGAGGGGTTCTGTGCACAAAGGAGAGCCAGGACAAACGCAACTATTCGTGCAAAGAATGTTGCAGCAAGCCGTTGCCTTGTGGGAATCACAAGTGCAAGGATTCATGTCACGCTGGGGCATGTCGTCCCTGCAAGCTCAGTCCCACGCAAATCACCAGCTGCCCTTGCGGAAAGCTGTTCGTTGCTGTGGGGCAGCGTGTCAGTTGTCTTGATCCAGTGCCCACCTGTGAAAGCGTGTGTGGCAAGACGTTACGCTGTGGAAAGCCTGCGCATCCTCATCAGTGCACGAGTAAGTGCCACTTGGGACAATGCCCGCCGTGTCCCAAGCAGACGGCCGTCAAGTGCCGTTGTGGACACATGGATCAGATGATCAAGTGTCGGCAGCTCTCAACGCGAGCAGACGATGCCCGCTGCAAGCGACGATGCACCAAGAAACGCAGTTGCGGTAAGCACAAATGCAACGCTGAGTGCTGTATTGATATCGATCACGCCTGCCCGTTGCCCTGCAATCGCACATTGAGCTGCGGACGCCACAAATGCGACCAGCCGTGTCATCGCGGCAACTGTCCACCATGTTATCGCAGCAGTTTCGAGGAGCTCTACTGCGAGTGCGGTGCGGAGGTCATCTACCCACCTGTGCCCTGCGGCACCAAGAAACCCATCTGCAAGAGACCCTGCTCCCGCACTCACGGATGCGAACATGTGCCGCAGCACAATTGCCATGCAGCGGCCACGTGCCCGCCCTGCATGATGTTCACGACGAAATGGTGTCATGGGAATCATGAGCAGCGCAAGACCATTCCTTGCTCGCAGCTCAGCTTTAGTTGCGGTCTGGCGTGTGCCAAGCCCCTTTCCTGTGGTCGTCACAAATGTATTCGACCATGCCACGAGGGCGATTGCCAGCAATCTGGTGAATTGTGCCGCCAAAGCTGCACCAAACCTCGTGTACTTTGTGGTCACAAATGCGCAGCACTCTGCCACGAAGGCGATTGCCCAGAGACGCCGTGCAAGGAGCTCGTCGAGGTGCAGTGCGAGTGCGGTAATCGAAAGCAGAATCGCAGTTGCCAGGAACTGGCGAGAGAGCACAGTCGGATCGCCACCGCCCAGCTGGCTTCCTCAATGGCGGAAATGTCTCGTGGAAACTACATGGAACTTAGCGAAATTTTGGCGCCCGCGAAAACTagcaaatcaaacaaaacATTGGACTGCAATGATGAGTGTCGCTTATTAGAGCGCAATCGTCGTTTGGCTATCGGCTTGCAATCGCGCAACCCGGACACGCAGTTGAAGTCACTCACCAAATACTCGGAATTCGCTCGGGGATTCGCCAAACGCAATCCAGCTCTGACCAAGAGTGTTTATGAGACGTTAAGCGATTTGGTGAAGCTAGCCAAGGAAAGCAAACAGAAGTCGAGAAGCCATTCATTTCCTACTATGAACCGCGAGAAGCGACAGCTGGTTCATGAGATGTGCGAGGTGTTTGGCGTGGAGTCCGTGTCTTATGATAAGGAGCCCAATCGCAATGTAGTTGCCACAGCGCACAAGGAACGCTGTTGGTTGCCTGCCACTAGCATCATGGAAATCTTAGCGCGCGAGTCGGGTCAACGCCGTGTTCCGGTTCCCAGTAATAACGCCTGGGGCCTCAAAAAGTAG
Protein Sequence: MAEYWHQQPQQRQLHANSDLAARDESAAACNGGNSVNGDTAEPIATGNNNNNYVNFNQFITQHNLASPNLSYSIGGGGGAFGLMPNSSTIANYGGVYPHPFVGYQNGEGAASGSGGSSKNFQELSGHSNAYSALDSNPFASGSSFDFSNSKLQVSAPEFVPNFAKLSLRASPATATCSELGLQSPSCSNSINNHSHNQHHIHSKFNNNNNNNNSTAIQANSETNNESQTLNNNHHQQQQPQQQHHHQQAQLPKAHGSNSRQQRRNDYREGRIDRNEDRYDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRATEELDTSNSNDSAHPSPEKQQQQQISPRRAGPDHEKLSQREKLMRDIEQRRLECLVCVELIKAHHGTWSCQNCYHLLHLKCTITWASSSKSAEGWRCPACQNVLQELPREYLCFCGKLKNPPLTRTELAHSCGELCCRAEGCSHACTLLCHPGPCPPCQANVSRRCGCGRTNKLMQCSMKQPLQCEAICDKLLNCSEHRCQQICHVGKCEPCGEQVQQHCHCGKQHRGVLCTKESQDKRNYSCKECCSKPLPCGNHKCKDSCHAGACRPCKLSPTQITSCPCGKLFVAVGQRVSCLDPVPTCESVCGKTLRCGKPAHPHQCTSKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICKRPCSRTHGCEHVPQHNCHAAATCPPCMMFTTKWCHGNHEQRKTIPCSQLSFSCGLACAKPLSCGRHKCIRPCHEGDCQQSGELCRQSCTKPRVLCGHKCAALCHEGDCPETPCKELVEVQCECGNRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPAKTSKSNKTLDCNDECRLLERNRRLAIGLQSRNPDTQLKSLTKYSEFARGFAKRNPALTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQLVHEMCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEILARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00472738;
90% Identity: iTF_00521029;
80% Identity: -