Basic Information

Insect: Drosophila flavopinicola
Gene Symbol: stc
Assembly: GCA_035042425.1
Location: JAWNLL010000165.1:408433-412553[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.5 1.3e+04 -3.7 0.5 15 18 379 382 378 383 0.79

2 16 2 1.8e+04 -4.1 1.6 15 19 406 410 405 410 0.81

3 16 0.058 5.2e+02 0.8 2.0 4 11 439 446 438 447 0.90

4 16 9.7e-07 0.0087 16.1 14.5 4 19 453 468 451 468 0.91

5 16 1.3e-07 0.0012 18.9 12.8 1 18 504 521 504 522 0.98

6 16 2 1.8e+04 -6.3 3.9 7 13 526 532 526 533 0.74

7 16 2 1.8e+04 -9.8 6.5 6 9 552 555 549 556 0.49

8 16 1.1e-08 9.7e-05 22.3 10.6 1 19 562 580 562 580 0.97

9 16 1.2 1.1e+04 -3.4 0.4 5 10 610 615 610 616 0.77

10 16 2.4e-05 0.22 11.6 17.0 4 19 628 643 621 643 0.88

11 16 0.06 5.4e+02 0.8 11.6 1 11 683 693 683 705 0.79

12 16 2.9e-10 2.6e-06 27.4 15.1 1 18 710 727 710 728 0.97

13 16 1.5 1.3e+04 -3.7 1.5 6 10 757 761 756 762 0.61

14 16 2 1.8e+04 -6.7 9.7 10 18 775 784 765 785 0.80

15 16 6.8e-09 6.1e-05 23.0 11.2 1 16 821 836 821 844 0.96

16 16 0.00049 4.4 7.4 13.3 1 19 854 873 854 873 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.5	1.3e+04	-3.7	0.5	15	18	379	382	378	383	0.79
2	16	2	1.8e+04	-4.1	1.6	15	19	406	410	405	410	0.81
3	16	0.058	5.2e+02	0.8	2.0	4	11	439	446	438	447	0.90
4	16	9.7e-07	0.0087	16.1	14.5	4	19	453	468	451	468	0.91
5	16	1.3e-07	0.0012	18.9	12.8	1	18	504	521	504	522	0.98
6	16	2	1.8e+04	-6.3	3.9	7	13	526	532	526	533	0.74
7	16	2	1.8e+04	-9.8	6.5	6	9	552	555	549	556	0.49
8	16	1.1e-08	9.7e-05	22.3	10.6	1	19	562	580	562	580	0.97
9	16	1.2	1.1e+04	-3.4	0.4	5	10	610	615	610	616	0.77
10	16	2.4e-05	0.22	11.6	17.0	4	19	628	643	621	643	0.88
11	16	0.06	5.4e+02	0.8	11.6	1	11	683	693	683	705	0.79
12	16	2.9e-10	2.6e-06	27.4	15.1	1	18	710	727	710	728	0.97
13	16	1.5	1.3e+04	-3.7	1.5	6	10	757	761	756	762	0.61
14	16	2	1.8e+04	-6.7	9.7	10	18	775	784	765	785	0.80
15	16	6.8e-09	6.1e-05	23.0	11.2	1	16	821	836	821	844	0.96
16	16	0.00049	4.4	7.4	13.3	1	19	854	873	854	873	0.96

Sequence Information

Coding Sequence: ATGGCCGAatattggcagcagcaacaacagcagccgcagcagctgcagcagcagcaacaacaacagccagcgcAGCAGCTAACAAATGGAGCAGCAGTGCATAGTAAttcagtcgctgctgctgctgccgcggcCGCTGCCTGCAATGGCGCCGGCGTTGACGCTTCCAGTGGCCaccacaccaacaacaacaactatgttAACTTCAATCAGTTCATCACGCAGCACAATCTGCACAGCTCCAACCTCGGCTACAgcgttggcggcggcggcggcgccttTGGCCTGACgcccagcagcgacagcgcgGCCAACGGCTCCGGCTCTGGCTCCGGCAACTCAACCGGTGGCAACTCGGCCAGCTTTGGCGGCGGCAGTGGCCAATACGCATCGTCTGCATTCGGCCATCAGAATGGCGATGGCCCATATTATCAGGAGGGAACTGCCTTTCAGAATTTGTATTCGCCGTTTGGCAACAATCCGTTTGCGGCCGCTGGTGGCGGGTTTGATTTTCGTGCTTCAAAGCTGCAGGCGACGGCGCCCGAATTTGTGCCCAATTTTGCCAAGCTCAGTCTGGCGCagcccaacaaaaacaataacaacaacagcaacaacactgcCACAACAACGCTGTCGTCCACggaggcagccagcagccatcctcagcagcagcagcagcagcaacaacagcaacaacaacagtcgcaAAGGCAACCAAAGCCGCAGCaggctggcagcagcagcagcagcagtaacaacagtCGCCAGCAGATGAGACGCCAGGACTACAGCGAGGATCGACACGAGGATCGATATGAGCGTGGTAAGAAGccgcagaagcagcagcgctaCGACAATCATCGCAGCAACAAGCGACGCGACGACTGGAATCGCAATCGCGATCGCATCAATGGCTATCCACGCGCCGCCGATGAGCTGGAcacgagcaacagcaacgacagcgCACAGACTTCACCCGAGAAGCAACCTCAACCGCAGCAAATCTCGCCGAGACGCGCGCCCGACCATGAGAAGCTGTCGCAGCGTGAGAAGCTCATGCGCGACATTGAGCAGCGACGACTGGAGTGTCTGGTGTGCGTGGAGCAGATTAAGGCGCATCACGGCACCTGGTCCTGCCAGAACTGCTACCATGTGCTGCATCTCAAGTGCACCATCACCTGGGCGAGCAGCTCCAAATCGAACGAGGGCTGGCGCTGTCCCGCCTGCCAGAATGTACTCCAAGAGCTGCCACGCGAATATCTGTGCTTCTGCGGCAAGCTCAAGAATCCGCCGCTCACACGCAACGAGCTGGCCCACAGCTGCGGCGAGCTGTGCTGTCGCCATGAGCACTGCGCCCACGCCTGCACGCTGTTGTGCCATCCGGGGCCGTGTCCGCCCTGCCAGGCGAACGTGAGTcgcagctgcggctgcggaCGCACCTCCAAGCTGATGCAGTGCGCCTTGAAGCAGCCGCTGCAGTGCGAGGCCAGCTGCCAGAAGGCGCTCAACTGCGGCGAGCATCGCTGCGTGCAGCCCTGCCATGCGGGCAAGTGTGAGTCCTGTGCGGAGCAGGTGGAGCAGCACTGCCACTGCGGCAAGCAGCAGCGCGAGGTGCTGTGCACCAGGGAGACTCAGGACAAGCGCTGCTACTCGTGCAAGGAGTGCTGCGGCAAGCCGTTGCCCTGCGGCAATCACAAGTGCAAGGACTCGTGCCACGCCGGCGCCTGTCGCATCTGTAAGCTGAGTCCGCAGCAGATCACCAGCTGTCCGTGCGGCAAGCTGCCCGTGCCGCCCGAGCAGCGCACCAGCTGCCTAGACCCCGTGCCCACCTGCGAGGGCCTCTGCGGCAAGACGCTGCGTTGCGGCAAGCCAGCGCATCCGCATCAGTGCGCCAGCAAGTGCCACTTGGGACAGTGTCCGCCGTGCCCGAAGCAGACGGCTGTCAAGTGCCGCTGCGGTCACATGGATCAGCTGATCAAGTGCCGGCAGCTGTCGACGCGAGCGGACGATGCGCGCTGCAAGCGCCGCTGCACCAAGAAGCGCAGCTGCGGCAAGCACAAGTGCAACGCGGAGTGCTGCATCGACATCGATCACGCCTGCCCGCTGCCCTGCAATCGCACGCTCAGCTGCGGCCGGCACAAGTGCGACCAGCCGTGTCATCGCGGCAACTGTCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTGTACTGCGAGTGCGGCGCCGAGGTCATCTATCCGCCGGTGCCGTGCGGCACCAAGCGGCCGCCCTGCAAGCGCCCCTGTTCGCGCACCCACGGCTGTGAGCATGCGCCGCAGCACAACTGCCATGCGGCGGCCAGCTGCCCGCCCTGCATGATGTTCACCACCAAGTGGTGTCATGGCAATCACGAGCAGCGCAAGACCATACCGTGCTCGCAGGTCAGCTTCAGCTGTGGCTTCGCCTGCGGCAAGCCTTTGAGCTGCGGCAGGCACAAGTGCATCCGGCCCTGTCACGAGGGCGACTGTCCGCAGCAGGCGGGCGAACTGTGCCGCCAGAGCTGCACCAAGCCGCGTCCGCTGTGTGGCCACAAGTGTGGCGCTGCCTGTCACGAGGACGCGTGCCCGGAGACGCCCTGCAAGGAGCTGGTTGAGGTGCAGTGCGAATGCGGCAATCGCAAGCAGAGTCGCAGCTGCCAGGAGCTCGCCCGGGAGCACAGTCGCATTGCCACCGCTCAGCTGGCCTCCTCCATGGCGGAGATGTCGCGCGGCAACTACATGGAGCTCAGCGAGATACTCGCgcccaacaaaaacaacaaatcaaacaagACCTTGGACTGCAATGACGAGTGTCGTCTGTTGGAGCGCAATCGCCGCTTGGCGATCGGTTTGCAGTCGCGCAATCCGGAGTCGCAGCTCAAGTCACTGACCAAGTACTCGGAGTTCTTACGCGGCTTTGCCAAGCGCAATCCGGCGCTGACCAAGAGTGTCTATGAAACGCTCACCGATCTGGTCAAGCTGGCCAAGGAGAGCAAGCAGAAGTCGCGTAGCCACTCGTTTCCCACCATGAATCGCGAGAAGCGTCAGATGGTGCACGAGCTGTGCGAGGTGTTTGGCATGGAGTCCGTCTCCTATGACAAGGAGCCCAATCGCAATGTGGTGGCCACGGCGCACAAGGAACGCTGCTGGTTGCCCGCCACTAGCATCATGGAGGTCCTGGCACGCGAATCCGGTCAACGGCGCGTTCCCGTGCCCAGCAACAATGCCTGGAGTAGCCTCAAGAAGTAG
Protein Sequence: MAEYWQQQQQQPQQLQQQQQQQPAQQLTNGAAVHSNSVAAAAAAAAACNGAGVDASSGHHTNNNNYVNFNQFITQHNLHSSNLGYSVGGGGGAFGLTPSSDSAANGSGSGSGNSTGGNSASFGGGSGQYASSAFGHQNGDGPYYQEGTAFQNLYSPFGNNPFAAAGGGFDFRASKLQATAPEFVPNFAKLSLAQPNKNNNNNSNNTATTTLSSTEAASSHPQQQQQQQQQQQQQSQRQPKPQQAGSSSSSSNNSRQQMRRQDYSEDRHEDRYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRAADELDTSNSNDSAQTSPEKQPQPQQISPRRAPDHEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSNEGWRCPACQNVLQELPREYLCFCGKLKNPPLTRNELAHSCGELCCRHEHCAHACTLLCHPGPCPPCQANVSRSCGCGRTSKLMQCALKQPLQCEASCQKALNCGEHRCVQPCHAGKCESCAEQVEQHCHCGKQQREVLCTRETQDKRCYSCKECCGKPLPCGNHKCKDSCHAGACRICKLSPQQITSCPCGKLPVPPEQRTSCLDPVPTCEGLCGKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQLIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKRPPCKRPCSRTHGCEHAPQHNCHAAASCPPCMMFTTKWCHGNHEQRKTIPCSQVSFSCGFACGKPLSCGRHKCIRPCHEGDCPQQAGELCRQSCTKPRPLCGHKCGAACHEDACPETPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPNKNNKSNKTLDCNDECRLLERNRRLAIGLQSRNPESQLKSLTKYSEFLRGFAKRNPALTKSVYETLTDLVKLAKESKQKSRSHSFPTMNREKRQMVHELCEVFGMESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWSSLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00472738;
90% Identity: -
80% Identity: -