Dfic014055.1
Basic Information
- Insect
- Drosophila ficusphila
- Gene Symbol
- br
- Assembly
- GCA_018152265.1
- Location
- JAECXK010000196.1:11250885-11253684[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-27 4.2e-25 87.9 0.1 1 101 22 118 22 124 0.92
Sequence Information
- Coding Sequence
- ATGGCCACCACCCAGCAGTACTCGCTGCGGTGGAACAACTACCTGCGCCACCTCACCTATTCCTTGGACAACCACCGGCTGAACGACGACTTCGTGGACGTGAGTCTCTGTGTAGATGGGCGCAGGATCAAGGCCCACAAGGTGGTGCTCTCTTCCTGCTCGTCATACTTCAAAGAGATCTTCAAGGAGAACCCCCACCCGCATCCAGTCATTATCTTTAAGTTCATCAAGTTTGAGGATCTCAACTCTATCATCGAGTTCATGTACCAGGGCGAAGTAAATGTGCAGCAGGAGGCGTTGCAGTCTTTCCTGCAGACCGCTGAGCTTCTGGCCGTCCAGGGACTCACCGCCGAGGAGAAGGAGAAGCCACAGCTCCCGGTGGCGCCACTTATTAGCGAGCACAAGCTGATCAAGACCATACCAAGCACTATTCGCGCGGTCAACGAGCAGCAGCAGCAACAGCAGCAGGTTGCCAATGTGCCCCAGGCGCAGTCGGCCACGCAAACCATCGAAATACCCACGGCCACTTCGGTCAAGAAGCGCAAGATCACCTTCTCCGACGACGACGACAACATCTACACCACCGAAACCGTCGACTACGCCGTCAAGGATGAGCAGACCATTGTGAAAACTGCCGAGATGACATTCCTGCGCGGCGCCGTCAAGATGGACATACCCGACTACATCGTGGGCGAAGTGGACGATCGCCTTTCGGACGGAGCCACGCCCCAGACGTCGCAGGATGCCACCACCGCAGCGGCCCAGAATGTGGCCCAGTATTCCTCCGAGTACGAGATACTTACCGAGTCGGAAATGGAGGAGAAGTACCAGGCGGATGCGGACAACGCCGAAATTGCCATTGAAATGACCGGATTGCTGGGCGCCGGCAGCGGGACGACGGGAGCGAACTCCAGCCAAGTAATGGAGGATGCGGGCGGTGGCGGTACGACGACTGGTTCCTCGACCACGCTGTCAGTGACTCCAGTAAATAAATCGGATAGCAAGGCCAGCGGGACAAATGATTCGCCCAATAATAAGTGGACAGAATGTCAGTTTTGCAAAATGGTTATAACCACGGTCAATCTTTGGAGACATATTCGCACCCAACACACCCCACAGCCGCCGCGCAAGTGCGACCTGTGCAATAAGAATTTCAAGAACAAGTACAGCCTGCGCGAGCACATACGCATCTCCCACGAGCAGAAAGTAGCCATTAAGACGGAGAACTGA
- Protein Sequence
- MATTQQYSLRWNNYLRHLTYSLDNHRLNDDFVDVSLCVDGRRIKAHKVVLSSCSSYFKEIFKENPHPHPVIIFKFIKFEDLNSIIEFMYQGEVNVQQEALQSFLQTAELLAVQGLTAEEKEKPQLPVAPLISEHKLIKTIPSTIRAVNEQQQQQQQVANVPQAQSATQTIEIPTATSVKKRKITFSDDDDNIYTTETVDYAVKDEQTIVKTAEMTFLRGAVKMDIPDYIVGEVDDRLSDGATPQTSQDATTAAAQNVAQYSSEYEILTESEMEEKYQADADNAEIAIEMTGLLGAGSGTTGANSSQVMEDAGGGGTTTGSSTTLSVTPVNKSDSKASGTNDSPNNKWTECQFCKMVITTVNLWRHIRTQHTPQPPRKCDLCNKNFKNKYSLREHIRISHEQKVAIKTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00919138; iTF_00485222; iTF_00590312; iTF_00590597; iTF_00565453; iTF_00515666; iTF_00531733; iTF_00580315; iTF_00580051; iTF_00617725; iTF_00524485; iTF_00593909; iTF_00492598; iTF_00492308; iTF_00489015; iTF_00488738; iTF_00541149; iTF_00541418; iTF_00915424;
- 90% Identity
- -
- 80% Identity
- -