Basic Information

Gene Symbol
Zbtb41
Assembly
GCA_035045575.1
Location
JAWNOV010000167.1:3143337-3145523[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.0078 0.59 10.9 5.9 2 23 223 244 222 244 0.97
2 12 0.00036 0.027 15.1 4.7 1 23 250 275 250 275 0.95
3 12 0.0017 0.13 13.0 0.4 1 23 282 307 282 307 0.95
4 12 0.0002 0.015 15.9 1.8 1 23 315 337 315 337 0.95
5 12 0.00028 0.021 15.4 0.8 3 23 346 366 344 366 0.98
6 12 5.5e-05 0.0041 17.6 0.6 1 23 372 394 372 394 0.98
7 12 3.1e-05 0.0023 18.4 0.6 1 23 400 423 400 423 0.97
8 12 0.012 0.89 10.3 5.9 1 23 429 451 429 451 0.96
9 12 3.6e-05 0.0027 18.2 0.8 1 23 457 479 457 479 0.99
10 12 0.00019 0.015 15.9 0.3 3 23 553 574 552 574 0.97
11 12 0.011 0.83 10.4 5.4 1 23 580 602 580 602 0.96
12 12 0.00016 0.012 16.2 5.1 1 23 608 630 608 630 0.99

Sequence Information

Coding Sequence
ATGAATGAGGAGACTCTAGCCTCAATACATACAATATGCCGCACTTGTTTGTCCAGCTTGGAGATCGCTGAAGCCTTCGATCTGTTTGTTGTTCCGGGTCTGGCCAagaagttgtgtgtgtgtacttcgCTGTCAGTGGAGCACCAGGATGGATTCCCGAGGAACCTCTGCACCACCTGTCACAGCCGTCTCAACGATTTGCATGACTTCCAGAAGCAATGCGTGGATTCAGTGCAGAGATTCAAGGAGTTGGTGTCCAGAAACTGCTTCGTTATCCGAGCTCTGCCGGACGACGATCATCCTGTCGTGAATGCTGCGCTGCAGGATGATGTCGATGAAGAGGAGCACATTATCTTTGACCCTCTGTTGACTTCTAAAATAGAAATTGACAACGAGGaaagtgtttttaaaatgattgaaGATGTCGACAAAGAATCTGATGATGTTGATAATTCGGAGGATGCATTTGATGACAGCGGAAGCGACTATATCAATGACGACATGGATTCTCAAGTAGATAGCAGCGAGTCCGATGACGAGAGGCCGTTGTCCCGCCTGCGAAATAGTTCCAGAGCTACAAAATCTAAGAAAGAAACGGATAAGCCTACAGAGAAGCCAAAACGTAAGCGTGTTCCAGCTGCTGAGAGGCAATTGAATCGCCCCATAGAATGTCACATTTGCAATCAGAAGTTTATTAAGGAATCTTGCTACGAAGAGCATATGAAACATCACAATGACCAATTACCATTTCAGTGCTCAGTGGAGAAGTGTAAAAAGGGATTCACGACTTCTAAAGGACTAAAGCATCATATGGAACACACTCACACGGAGCTATGCAAACTTCATCCCTGTACGGTCGAAGGATGCAGTGAAGCCTTTGCACAAACTCGAATGCTGACTCAACATCTGAGAAAGGTACATAATGTTGCCAAGCCCATTATACATCCATGTCCAGAATGCGATAAAGTATTCCGTTGTCCAATGGCACTGAAGAAACATATGTATGATCACACTGGAGAGGAGCTGCCCTTCGGCTGTAACATTTGCCAGAAACGCTATCGAGTGAATACCGAACTCCGTGATCATCTTTTGCGCCACGCCGGGATCAGAAACTTTGTTTGTCCTCATTGCGGTGTGGGCAGGACCACAAAACAGGAGTTGGACAAGCACATGCTGACTCACACAAAGGAAAAGAAGTTCAAGTGTGATCAATGCGATCAGACCTTCAAGGACAAGCCATCTGTGTCCAGACACGTCAAGGTGGTGCACATGCAAATTAGGAACTTTGTCTGCCAGTATTGCCAAAAGTCCTTCGCCAGCGCTTATCACTGCAAGACTCACGAGAAATTACACACTAGGAACGATTGTTTCGAATGCAAAATCTGTGGCAGCAGCTTCCCTTTTGGAAGTAGATTAACAAAGCACTTAAGGACCCATGAGAAAGGCAAGAAGACGAAAACTGATGGGGTTGTTCAGAAGGAGTCCAAAGAACCAGATGttaaaaagaaaccaaaaattCCTGCCAAGCCAAGAGATCTACGTCGTGTTAAGGTAGTGAATATATCACAATTAGCTGGCACTGCTGTTAATCCGTTTTCAACGGTACTAGTATCATCCCCGCAAGAAAATTTAACCAAAAGCGAAGCAAGACCCTTTTGTCTGCTCTGTGACAAAAATTTCACCACAATTGGTGGTTTGAGAATCCACATCAAGACGGTACACGATAAGATCAAGGACTTTGCCTGCCGCTTCTGTCCCAATCGTTTTAGCAAAAAATGTAATCTACGTCGTCATGAGTATACACATACAGGGGAAAAGCCGTACGAGTGTAACGTATGCAATCAGCATTTTAGACATGATAAAACCTTAATAAATCATATGAAATCACACAACAGAAAAGAACCgaggaaaagaaagaaagctgagcccaaaacaaaatatcCTTCAAAAGAACCTGAGGTCTCTAGAGTGAGACTAAATACGGAACCAGTAAAAAACTACGAGCAGTTTCAAGATCCAGATGCAGAACGAGCTGCTGCAATGGCTCAATTGATGGCGCAACAATTGGAAGAAAGTGAAGCGAAGCGTAAAGCGGAAGAGAAAACTCGGAAAATTCAGGAGGCAGCGTGCGAGCAGCTCCAGAAATTGCAAAAGCCGCAGATCACCTATGATAGGCTTTCTAAATAA
Protein Sequence
MNEETLASIHTICRTCLSSLEIAEAFDLFVVPGLAKKLCVCTSLSVEHQDGFPRNLCTTCHSRLNDLHDFQKQCVDSVQRFKELVSRNCFVIRALPDDDHPVVNAALQDDVDEEEHIIFDPLLTSKIEIDNEESVFKMIEDVDKESDDVDNSEDAFDDSGSDYINDDMDSQVDSSESDDERPLSRLRNSSRATKSKKETDKPTEKPKRKRVPAAERQLNRPIECHICNQKFIKESCYEEHMKHHNDQLPFQCSVEKCKKGFTTSKGLKHHMEHTHTELCKLHPCTVEGCSEAFAQTRMLTQHLRKVHNVAKPIIHPCPECDKVFRCPMALKKHMYDHTGEELPFGCNICQKRYRVNTELRDHLLRHAGIRNFVCPHCGVGRTTKQELDKHMLTHTKEKKFKCDQCDQTFKDKPSVSRHVKVVHMQIRNFVCQYCQKSFASAYHCKTHEKLHTRNDCFECKICGSSFPFGSRLTKHLRTHEKGKKTKTDGVVQKESKEPDVKKKPKIPAKPRDLRRVKVVNISQLAGTAVNPFSTVLVSSPQENLTKSEARPFCLLCDKNFTTIGGLRIHIKTVHDKIKDFACRFCPNRFSKKCNLRRHEYTHTGEKPYECNVCNQHFRHDKTLINHMKSHNRKEPRKRKKAEPKTKYPSKEPEVSRVRLNTEPVKNYEQFQDPDAERAAAMAQLMAQQLEESEAKRKAEEKTRKIQEAACEQLQKLQKPQITYDRLSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00523112;
90% Identity
iTF_00523112;
80% Identity
-