Dfal003941.1
Basic Information
- Insect
- Drosophila falleni
- Gene Symbol
- -
- Assembly
- GCA_035045575.1
- Location
- JAWNOV010000046.1:1535729-1537327[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.3e-16 4.1e-13 49.0 0.0 2 45 363 406 362 406 0.95 2 3 0.034 62 3.6 0.0 27 37 435 445 432 450 0.89 3 3 1.4e-20 2.5e-17 62.5 0.0 2 42 472 512 471 514 0.96
Sequence Information
- Coding Sequence
- ATGGGTCACTCGTCCACAATTATGGATATCCAGCGCGTTCTCCTCAACCAGCAGAGCAGCAACGAAAGCTGCGAGGTATTGCTAGTGGCCAAAGATGGTATCAGTGTCCGTGCACATCTCTTCGTGCTTAGCACGTGCAGCGATCTGATGCGTAATCTGCTGGTCGATTTACCCGTCGGCCAGGAGGCAACAGTTATCCTGCCCGACATTCGTGGCGAGCTGCTGGAGAGCATGTTATCGTTTATTTACATGGGAGAAACCAGCTTATCATCTGCCCTGCTCACCGAGTTTCTCGAAGCGATCAATCTCTTGGGCATCAAATCGGCCATAAGCTTCGAAACGAATCCCACAGCGATGACCACCACAAATGTGGTCAGTGGAGCAATGGCTGTGGAGGCAGCCAAGTCCATTAGTGGCTTGCACATTGCGAATACAGCACTtatggaggaggaggaggaagaagaTGGCAATGTGGTCGTCGGCAAACTGGAAGTGGGCAATTCCGTACTCACTGACCATCCGCAACAGAGCCAGCAGCAGGATGGCAGATCCTTGGAATTCCTCGATGTGTACACGGATCAGCCAAAGATAACATATTCCATTGAACACATGGGTGGCACATCCAGTGGCAATCAGTACATATTAACGGAGAACACGGGCACATTTACCATCACACAATCCGCATCCTCAGTGACCAAACTAGGAGGCACTGTAGTTGACCACGTCACAGGTAGTGAGTTGGCGGTGGATGATGGGGAGGCTGATGTTATAGACGATCATGAGGAATCCGAGTCACATTTAATTGAAGAGGACTATGTTCCAACTGCTGGTCCTTTGATAGAGATGGGTGCAGATGCGGATGCAGATGTTGATATGACTGAGGATGTAATGCACGAGGAAGATGCTGGtgaagaggaggaggaagaggaatTACTGGATGTGAAGCCACGTAAATCGCAGCTAGACATGAAAATCCTGAGGACAAAGGTACAGCCACGTTCAACGACCTCAAAGGCTTCCAAGAAGACAATGACCAAACAGCATCAACAATATGCGGAACTCAAAAAGGAGATCAAGGACGACATCAATGATGCTCTGGAACTGGCAGCAGATGCAGTGCTTCACGAGGGTCTCAGTCTTCAAAAGGCTGCCGATCGTTACGACATATCGAAGACCGTGTTGTGGCGACGTGTCCGTTCCAATCCTGCCTACATGAGAATCAAGCGCGAGAAGCCCTCACTCTCGGAGGCGTATGAGCGCCTAAAGAACGGTGACTCCTTAAAGAGCATTAGTCAAGATCTGAGCATACCCATGTCCACATTGCACAGACACAAGGTGCGACTGGCGGCTCAGGGTCGTTTGCCCGAATTCGTTGCCTGTAGGAGACGAGACAGCACTCCGAAGGACGAGCTACGGGACAAGCTGGCCAAGGCGGTACATGCCTGTGTCAATGGAGGCATGTCCCAGAATCATGCAGCGAATCTTTTCGAAATACCCAAGAGCACACTCTGGCGACATCTGCAACGTCGGGTCACAGAGGCGGAGCGAAAGGTCaaagaggagcaggaggaggaagaTGAAGAAGACGCTCTCAACTAG
- Protein Sequence
- MGHSSTIMDIQRVLLNQQSSNESCEVLLVAKDGISVRAHLFVLSTCSDLMRNLLVDLPVGQEATVILPDIRGELLESMLSFIYMGETSLSSALLTEFLEAINLLGIKSAISFETNPTAMTTTNVVSGAMAVEAAKSISGLHIANTALMEEEEEEDGNVVVGKLEVGNSVLTDHPQQSQQQDGRSLEFLDVYTDQPKITYSIEHMGGTSSGNQYILTENTGTFTITQSASSVTKLGGTVVDHVTGSELAVDDGEADVIDDHEESESHLIEEDYVPTAGPLIEMGADADADVDMTEDVMHEEDAGEEEEEEELLDVKPRKSQLDMKILRTKVQPRSTTSKASKKTMTKQHQQYAELKKEIKDDINDALELAADAVLHEGLSLQKAADRYDISKTVLWRRVRSNPAYMRIKREKPSLSEAYERLKNGDSLKSISQDLSIPMSTLHRHKVRLAAQGRLPEFVACRRRDSTPKDELRDKLAKAVHACVNGGMSQNHAANLFEIPKSTLWRHLQRRVTEAERKVKEEQEEEDEEDALN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00610763;
- 90% Identity
- iTF_00510457;
- 80% Identity
- iTF_00506985;