Dfal000483.1
Basic Information
- Insect
- Drosophila falleni
- Gene Symbol
- mbr-1
- Assembly
- GCA_035045575.1
- Location
- JAWNOV010000011.1:1394462-1400757[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7e-12 1.3e-08 34.6 0.0 1 40 278 318 278 321 0.90 2 4 6.2e-14 1.1e-10 41.1 0.1 2 39 333 370 332 373 0.94 3 4 9e-18 1.6e-14 53.4 0.0 1 45 387 432 387 432 0.98 4 4 9.1e-20 1.6e-16 59.8 0.0 1 43 439 482 439 483 0.97
Sequence Information
- Coding Sequence
- atgacTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTGGGCGTGCCCATGGGATTTCTGGACTTTACACCGGAGCCACCAGCACCATCGGCCACACCAGTCACCGTAACGGAACATGTCGATCTATCGTGCAACCCCAGCACCGATACACGCGATCTATCAAATCCCACCGAACCGCTTGACATAGACAATCATTTGGCTCAGCAAATCCATCGGCTCGATCAATCTCCCATGCATTCAATATCGCATCATCATACAACTGGCGACGAGAGCAACTCGAATCTGGTGCAGCATATCAAAAGTGAAGTGATTGAGGCCAAGCATTTGGCGcatgtgcaacagcaacaacaacaacagcagcagcagcagcaacaacaacagcaacaacaacaacagcagcaacatgcacatcatcatcagcatttgCACGCTCAGCAATTGTTGGCgcaaagtcaacaacaacagcaacagcagcaacaacatcagcagcaacagcagcagcaacaacagcagcaacaacaacagcagcagcagcaacagcaggcaGCAGTGCATGGACAGCATGGCACGCATGCAACACATGCGGAAATTAGTGGTGCCACTGTCATGGAGATTGATCCGAGCCAGATCAAGCATGAGCCGGGCATGATAATAACGCCAGAGATTGTCAATATGATGTCAACTGGGCATATGGaCATGTACAACTCGGATACGAGCGAGGACTCAATGATGATCGCCAACGGTTCGCCGCACGATCAAAATGAGCCGCATTATACGAATTTGGATCAGCAACACGGCGGCCTGGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCATCAACGACATTATGGCAGCGTGCACATCGTTTGGGCATCGAAACGCCTAAGAAGGAGGGCGGCACCAAATCATGGAATGAGGATGCATTACAGAATGCCTTGGAGGCATTCCGATCGGGTCAAATATCGGCAAATAAAGCATCAAAAGCGTTCGGTATACCCTCATCGACGCTCTACAAGATAGCGCGTCGGGAGGGCATACGGCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACACCCGAGGATTTGGAGCGTGCATTGGAGGCGATACGTGCCGGTAATACGTCTGTGCAAAAAGCAAGTGCTGAATTTGGCATACCGACAGGAACACTTTATGGACGCTGCAAACGGGAGGGCATCGAATTATCGCGTTCAAATCCAACACCTTGGTCCGAGGATGCCATGAACGAGGCATTGAACTCAGTGCGCGTTGGCCAAATGTCCATCAATCAGGCGGCCATACACTACAACCTGCCCTACAGTTCGCTTTATGGACGCTTCAAGCGCGGCAAATACGATGTTGTGGCAAATACCAGTGGCGTATCGCTGATGAACACATCGGGCAACACGACCGGCAGCATTGAGATTATCGAGCATAGTCAGGAGAATTCGTTGCAtatgttgcagcaacagttCCCGTACAGTCCGTCGCCGCATCCGCCGACGCCGCAGCATCACAGTACACCGCAGCACCACAGTTCGCAGCAGGGGCCACCGACGCCACAGCATATGCAACAGCATGTGGTGCACATGCAACAGCAGTCGCCACATCAGGcgcatcatcaacaacaacaacagcagcaacagcacttgcaacaacagcaacagcaacaacaggatGTGGTAACATCGAGTAGCCAAGTGGTGCacagccagcaacaacaacagcagcttcaACAGATCTATCAGCATCACGGCACGCCCGAGCGTAGTTGA
- Protein Sequence
- MTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSISHHHTTGDESNSNLVQHIKSEVIEAKHLAHVQQQQQQQQQQQQQQQQQQQQQQHAHHHQHLHAQQLLAQSQQQQQQQQQHQQQQQQQQQQQQQQQQQQQQAAVHGQHGTHATHAEISGATVMEIDPSQIKHEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEAFRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVSLMNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSSQQGPPTPQHMQQHVVHMQQQSPHQAHHQQQQQQQQHLQQQQQQQQDVVTSSSQVVHSQQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00541683;
- 90% Identity
- -
- 80% Identity
- -