Basic Information

Gene Symbol
-
Assembly
GCA_035045725.1
Location
JAWNOU010000197.1:1693482-1725997[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 0.026 1.9 9.3 1.9 1 23 1244 1266 1244 1267 0.95
2 8 1 71 4.3 0.8 1 23 1272 1295 1272 1295 0.96
3 8 0.00022 0.016 15.8 0.8 1 23 1491 1514 1491 1514 0.96
4 8 0.005 0.35 11.6 0.5 2 23 1523 1544 1522 1544 0.97
5 8 0.049 3.5 8.4 0.3 1 23 1551 1574 1551 1574 0.96
6 8 1.9e-05 0.0014 19.1 1.4 1 23 1580 1602 1580 1602 0.97
7 8 4.6e-06 0.00033 21.1 0.3 1 23 1607 1629 1607 1629 0.99
8 8 0.16 12 6.8 5.3 1 23 1635 1657 1635 1657 0.98

Sequence Information

Coding Sequence
ATGGCCACAGCTGACTGCATGAGTGCAGCCAAGGATGTGGGCGGCGGCAGAGGAATTCAACAATCAGCAATTGACGCCAGCatcggagacggagacggcgTTGCCGAGCTGCTTCAAATGCCGCGGGtgtgtcgttgttgttgcaaaggCGACATGGAATTGCTTGGCCTTTTCGAGGCCAGCGTTGAGACAGCCAAACAGACAACACAAAGTCAACGCCGACGCAAAACAACTACAAttgaagaagcagcaacaacaacaacaacgaccgcacaacaagaacaacaacagcgcaaaTGTGATAATCCCGTTGAATATGCGCTCAGCGGTGCGCACAGCAGTATGGAAACTGTGTTAGAGGAGATGATCATTTGGATGCTCAATATCTCACGCGATGATGGCCTGCCCCAGGAGATTTGCCGGCAGTGCAAGGCGCAGTTCATAATGGTTGCCAAGTTCCGGCGGCGCTGCTTGCGTGTACAGCAGCGGCTAGAGGAGTATGCCAAAGAGATAGCCGAGCGCAAGAGATGTCTGACAGCCAAGCAAGAGGAGCAATCACAGCATAATGAAGAGTATTATCTGCATCTGCCAGAGTCACAAATGGAGCGCAAGCGACGCCTGGTGCTTAGTAAGGAGGTGGCACAGTTGGAATCGCAGCCGAAACAAGCCAAGACTAAAGCCGAACGCGTGCCGACGCCGCCCAAGCTGCGACGCCTGCAGCTTAGATTGCGCAACATGCGCATTGCCTCCTTGCCAGCCAACCAAATTGAGACTGAACAACCGATGCGGAGTGCGTCGCAGCAGGACGAATTAAAGGAACGGTCGCCCCTGAGAATGCTATGCAAAAAAATGCACATGCCCTGGAAAACGAAAGCGGCACGCAAACAGCTCTCAGAAACGTGGTCCAGCTGTTCCACGGCCTTCCACTGCCGGGCAGCGTCCATAACGCCAGAGGAGCTGACAAAGGCACAGTTGACGTCACCGCCACGGGTGAAAAGTTCCGACACGGAGAACGAAACAAGCGCAGGTCAAACGTCACCCGAGCAGCTCAGCGATTTGTCCGTGAATCCATGTCACGGCTTCGCAAGCGACTGCCACGATTGGTCGCCGCCCTCCTCCATTTCATCAGTAGCCACTCCCGCCACCCAAGACGCAGCGACGCCTAAGCCAACTGCCCAGCTGCAGTTTCCACCAAAGAGCGGGACGCCCAAAAAACAGCTCGTGGTGCTGCGCCGAGGACGACGTGGGCGTAGCTCTGTGCCGCTAAAGCGAGCGAAGCGCATtgcgaagaagaagaagatgcaAGCAACTGCAGAGAATCATTTGTCCAAGCAGAAGATGGAGCAATCAACCAGTCAACCAAAAGAGCAACAGTGTGAAGAGACACTCGCAGCCGGGGCAGAGGAGAAGCTGGCCAGCAGCTCCTCGGATGAGACGCCATGCTACAGTCAGGATGTACAATCAGAAACCACCTTCGAGGATCTGGCGCCCATGACAACAGATGAGGAGCGAGAAAAACCAAGTGAAACAGCGGCAGATGAGACCACAACCGCTGAGAGCGACAAGGAGAAGCCCACAGTAGCAACAAGTGAGTCCATGGAACAGCTGGAGCACGCCGCGCCAGATCAGTTGCAGTCGCCCGACGCAACTGAATGCCCTGCAGAAAATGCAACCAATCAAACTCAGGACAAAAGGCCAACAGAACAAATGCAAAGCATATCAAAGAAAGTAAACGAGACAGAGGAACAGATGGCCGTAGATGTAACCAACCCTTTATGCACACACAATGGAACTGCAGAAACAGCTGATTCCACTGTTCAATCTGAAGAGCTCACTTCATCCACCATGGAGCACAGCCAGCCAATCCAGGGCAGTCATTGCCTGTCGCCGGAAGTGCCAGCTTCCGAGTGCGAAATAGAGCTGGGCATTGCAAATGACGAGCAGCAGCTCGAAAAGCAGCCATCCGTTGAAGAGCCCGTGCAGGAGGCGGAGGAGCCAGCGTCGGAGCTTATAGTAAGCATACCGTTAGATGTGCTCGGCGACGATCTGCAGCGGAAACTATGCAGCAGCGATCCAATCGCgcaggaggaggaagaggaagatCAAAATGCCGAGCAGAAGGAGCCCGCAGAGGCGGACGATGTGAATAACAATGAGAATGGTGAGAATTTTTGCCAGAGTGCTACAGCAGATAGCTTCAATGCTGCTGTGGCACTCACAACCAAACAAATTGAAGCAGAACCAAATGGAGGGAAGGTAGTCGTTCCACTCGACGACGACATGGAGTCCCTGGAACGATTAGCTGATATGCAGCCGCCTGCACCGGTAGCGGAAGTGCAGCCGCTCCGTGCTGTGAATGCCAGCTCCATGGATTTTTTGGCCGAATTCGAGAAGCACTGCGAGAAGACGCTCAAGCTGCAGGCGAAGAAGGCGCCACTGGAAACGGAACTAGAACTGGTGGAGGCCAAACAGCAGCTGGAGGTGGAAATGAACGATGTGGAGAGCACCCTGCATGGCATTCTGAATGAGATGCAGGACCAGCATCTCTATACGCCTGTCTGTACGCCGATTGATGAATTTCTAACGCCTGCCGATTATGTGCCGCTCAACGAGACGGAAACGCCAGCGGCCACGCCAACAGCGCCACAGCTCTACGCGTCGCCAGCTCAGACACCTGAGGGGCAGGTGTCGcctcagccgcagcagcaacaggtgaAGGAGGGGAATCTGTTTGATAGCAGCAACTTTAGCAATGAGCTGATCGGCTTCCAAAATGATATGCCCTGCTTTGAAAACATTGAGGCAACGCCTGAGTCGATGGCAGCGCAGCAAAgcctgcagctggagctgacGCAGCTGCTCAATGAGCTGCAGCCAGCACAGCAGCAAtcagcacagcagcaacagccgctgccgctgcaacaacagcaacagttgcagctacAGCAGGAAGCTGTCAGCTATGAGACACTGTACCAGGCACCGCTTACCGCCCCAGCTCCAGTGAACGGCAATAAGTTGCAGCTCATCCAAATGCAGCCGCAGGAGACGCTGTGGCAGGCACAGGCGACAACCGCACAGCAGACGACAACTACACAGCTGCAATGGTCGACTGTGGGCGGCCTGGAGGCCATCAAGACAACACCTGTTGCCGGCCTGGATAGTCTGGACGGCAGCGGCACCACCACCTACTACATCAACGCCAGCGATCTCTACCagacgcagctgcagcagcaaccagcTCATCTGACGGGCGATAGCTATGCAATACTCGATAGCAATGAGAACTACgtgctggagcagcagcagcaacagcagcagcaacccaTTATGATACTCATACAGCAGCcagagctgcagcagccggtGGCATCCGCCAGCAATCCGCAACAGGCGCCGCTGCAAATAACATACGGCACCAGCCCGGGCAATGAGCTGCACGCCTTTCCCAcacagcagttgcagcagccgcagcaactgcagcagcagcagcatcagcaacaacagcaccagGAACGTACACAACaaaagccacaacaacaaaaacctcACTCACAgtcacaacaacaagtacaaaATACAGTATTAGGCTTGCCTGCTGCCGTACCGCCGCCCACCCGCGGCCGTCCGCCCTTGCTCAAGTGCCGCTTCTGCCAGAATGGTCCGCGTTTCTCCAGCAGCCTGGAGTATAGTCGTCACATCATTGAGCTGCATCCGGCTGTGGCGCCCTTCAATTGTCCCCACTGCCCGCTGGCCTTTGCCGGTCGCAGCAAGCGCAGCCAGCACATCCTCAACCATCACATGGTGCAGCAGTTCCACTGTGGCCAATGCTCACTGATGTTGCCCTCACAGCGTGCTCTggatttgcatttgcagcgcTTTCACATGCCGCTGCCAACGGAATCGGCCGCGTCCGGAGAaccagctgctggcgctgtgCGCCTAGACGAGGTTCAACTGCAAATAGCCAACAGGCGAGAGCTTCcaaaactgcagcagctgaagacGTCGCCGCATATGCCAGCTTTGGATCTTGAAACAAACCCGCCACAGCCACGCAGGACGCGCATACTCTGCTGCCCGGACTGCGAGGACTGCTCAAGTGGACATAGTCATGGCAGCGGCCAGTCGACGTACGAGGAGCTGACCAATTTGCAGCCACCGCCGACGGTGCTGACGCCGCCGTCGACAATTGCATCGGTGCCGTCGCCGCAGCCAACGCCGCACATAACGTTGCCCTCGCCAGAGCAATCGGAGCCGGACTCGACGACGGCAACTTTGCGGCAGTTTCGCAAGCGCTGCGTGACCAATTGCACGACAGGAGCAACCACACCAGTCGCAGCAccaactgcagcagttgctgcggCAACAATGCTAACCACAGCCGCATCGCCGTCGCCCTCCTCGTCGCCGTCCTCGTCGACCATGGAGACGAGCGTAACGCTGCAGCTGGGCAAACTGAGCAGCAGCCATCAGTGCGTGATCTGCGAGAAGCGTTTTACCAATATCATAGCGCTTCGCAAGCACCAGCAGCTGGCCCATGATTCGCAGACATCCATGCCGTGGGTGTGCGGGATTTGTAAGCGTGGCTATCGGAAACGCACCGACATGGATAATCATATGAAATCCCATGAGCCCAAGGGTCGTCCGTACGAGTGCAATGAGTGTTGGGTACGTTTTCCGGAATTCAAACAGCTGGCAATGCACAAGTTCACCGTCCATGAGCTGATCAAGCCGCATACCTGCGATGAGTGTGGTAAACAATTTGGTACGGAGAGCGCCTTGAAGACGCACATTAAGTTTCACGGTGAAAGCGGCTTCGAGTGCGACGAATGCGGCGAGGCATTCGCCTATATCAAAGATTTGCGCAAACATCGGCGCACCCACAACAGCGAACTATTTTACAAATGCGATTACTGTCCACGCACGTTTCTACATTTTTCGAGCCATCGTGCACACATAAATACCCACCTGCCGTTGGGCGTGTTCCTCAACGATAAGATGCCCAGCAGCGTGAGCAGCAAAATTGAGAATCCTTCGACGCCAGCAACTACCGAGGAATCGCTGCCATTGACGCCGCTTAGCAGTTGCAATGGCAACGGCGGCAGCATCGAGGATTGCCCCGGCTCTGTGGAGTTCGTGGAGAGCAGTGTAGCGCCATCGTTGGATATGATTGTGAATACGCCATAA
Protein Sequence
MATADCMSAAKDVGGGRGIQQSAIDASIGDGDGVAELLQMPRVCRCCCKGDMELLGLFEASVETAKQTTQSQRRRKTTTIEEAATTTTTTAQQEQQQRKCDNPVEYALSGAHSSMETVLEEMIIWMLNISRDDGLPQEICRQCKAQFIMVAKFRRRCLRVQQRLEEYAKEIAERKRCLTAKQEEQSQHNEEYYLHLPESQMERKRRLVLSKEVAQLESQPKQAKTKAERVPTPPKLRRLQLRLRNMRIASLPANQIETEQPMRSASQQDELKERSPLRMLCKKMHMPWKTKAARKQLSETWSSCSTAFHCRAASITPEELTKAQLTSPPRVKSSDTENETSAGQTSPEQLSDLSVNPCHGFASDCHDWSPPSSISSVATPATQDAATPKPTAQLQFPPKSGTPKKQLVVLRRGRRGRSSVPLKRAKRIAKKKKMQATAENHLSKQKMEQSTSQPKEQQCEETLAAGAEEKLASSSSDETPCYSQDVQSETTFEDLAPMTTDEEREKPSETAADETTTAESDKEKPTVATSESMEQLEHAAPDQLQSPDATECPAENATNQTQDKRPTEQMQSISKKVNETEEQMAVDVTNPLCTHNGTAETADSTVQSEELTSSTMEHSQPIQGSHCLSPEVPASECEIELGIANDEQQLEKQPSVEEPVQEAEEPASELIVSIPLDVLGDDLQRKLCSSDPIAQEEEEEDQNAEQKEPAEADDVNNNENGENFCQSATADSFNAAVALTTKQIEAEPNGGKVVVPLDDDMESLERLADMQPPAPVAEVQPLRAVNASSMDFLAEFEKHCEKTLKLQAKKAPLETELELVEAKQQLEVEMNDVESTLHGILNEMQDQHLYTPVCTPIDEFLTPADYVPLNETETPAATPTAPQLYASPAQTPEGQVSPQPQQQQVKEGNLFDSSNFSNELIGFQNDMPCFENIEATPESMAAQQSLQLELTQLLNELQPAQQQSAQQQQPLPLQQQQQLQLQQEAVSYETLYQAPLTAPAPVNGNKLQLIQMQPQETLWQAQATTAQQTTTTQLQWSTVGGLEAIKTTPVAGLDSLDGSGTTTYYINASDLYQTQLQQQPAHLTGDSYAILDSNENYVLEQQQQQQQQPIMILIQQPELQQPVASASNPQQAPLQITYGTSPGNELHAFPTQQLQQPQQLQQQQHQQQQHQERTQQKPQQQKPHSQSQQQVQNTVLGLPAAVPPPTRGRPPLLKCRFCQNGPRFSSSLEYSRHIIELHPAVAPFNCPHCPLAFAGRSKRSQHILNHHMVQQFHCGQCSLMLPSQRALDLHLQRFHMPLPTESAASGEPAAGAVRLDEVQLQIANRRELPKLQQLKTSPHMPALDLETNPPQPRRTRILCCPDCEDCSSGHSHGSGQSTYEELTNLQPPPTVLTPPSTIASVPSPQPTPHITLPSPEQSEPDSTTATLRQFRKRCVTNCTTGATTPVAAPTAAVAAATMLTTAASPSPSSSPSSSTMETSVTLQLGKLSSSHQCVICEKRFTNIIALRKHQQLAHDSQTSMPWVCGICKRGYRKRTDMDNHMKSHEPKGRPYECNECWVRFPEFKQLAMHKFTVHELIKPHTCDECGKQFGTESALKTHIKFHGESGFECDECGEAFAYIKDLRKHRRTHNSELFYKCDYCPRTFLHFSSHRAHINTHLPLGVFLNDKMPSSVSSKIENPSTPATTEESLPLTPLSSCNGNGGSIEDCPGSVEFVESSVAPSLDMIVNTP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-