Dere009276.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila erecta
Gene Symbol
RREB1
Assembly
GCA_000005135.1
Location
CH954180.1:1895284-1901229[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.035 2.4 8.8 0.8 1 21 253 273 253 275 0.93
2 13 0.00078 0.054 14.0 0.1 1 23 285 307 285 307 0.97
3 13 7.9e-05 0.0055 17.1 7.3 1 23 313 335 313 335 0.98
4 13 2 1.4e+02 3.2 3.7 2 19 554 571 554 573 0.97
5 13 0.0081 0.57 10.8 0.1 1 23 717 739 717 739 0.97
6 13 1.2e-05 0.00084 19.7 0.7 1 23 749 771 749 771 0.99
7 13 0.00081 0.057 13.9 2.0 1 23 777 800 777 800 0.97
8 13 0.0029 0.2 12.2 2.0 1 23 1065 1088 1065 1088 0.95
9 13 8.4e-05 0.0059 17.0 0.3 2 23 1455 1476 1454 1476 0.97
10 13 0.14 9.9 6.9 6.3 1 23 1482 1505 1482 1505 0.97
11 13 7.5 5.3e+02 1.5 2.0 1 23 1627 1650 1627 1650 0.83
12 13 0.0082 0.57 10.8 0.5 3 23 1706 1726 1704 1726 0.96
13 13 0.0014 0.095 13.2 4.8 1 23 1732 1754 1732 1754 0.99

Sequence Information

Coding Sequence
ATGCTCGccgcacagcagcagcagcacaataacaacagcacaGCGGAATCCGAAATGGAGCGCCAGCGGCGGGACTCCACCACATCGGAGTCCTCCCTGGAGCATCTGGATCTGGGACGTACGCCCAAGAAACTGGGCGGCAACAGTGGCTCCGCGCAGACCACATCCACGCCACATGAGTCGACGACGGTGGCGTCGTCGCGCAAGCGTAAACTTCGCCATTTGCAAATGAatcaccatcagcagcagcactcgGAATTGCTGAGTGAtgaggaggaggcggcggcagatgaggaggacgaggagttggaggaggacgacgaccAGGTGGCCGCCTTGGGTTCAAGAAGTCTGGGACGGCACAAGCAGCGCCGCAGTGGTGGCGCCTCTACCCAGGCCTCCATTGTGGTGGACTACAGCAGTGGCGATGCCAGTTCGCTGCGCAAGAAATTCCGTCTGAATCGCTCGGCGGCCAGTCTCTCGGAGTCGGGATTCGTGGACGCCAGCAGCACCACTGGCCACAGTGGCTATTTGggtaacagcagcagcactgccAACACAACTGCCAGCAGTGGTATTGGTGCTGGCGCTGGCGCTGGCGCAGTGGCTCCATCTCCAGTCGGCGGAGCAGCGACCACGGCAGCCTCCAGCAGCAGTagtggcagcagcagtggcggATCCGGTGGCTCCTCGCCCCAGGGCTTGTGCCTCTCCAGCGGCGAATCGGGCATCGGTGCTGGCGACGAGCATATGAAATACCTATGCCCCATCTGCGAGGTGGTCTCGGCCACGCCACACGAGTTCACCAACCACATCCGGTGCCACAATTACGCCAACGGCGATACGGATAACTTCATCTGCCGCATTTGCTCCAAGgTGCTATCCTCGGCTTCATCCCTGGACAGACACGTGCTGGTGCACACGGGCGAGCGGCCCTTCAACTGCCGCTACTGCCACCTGACGTTCACCACCAATGGCAACATGCACCGCCACATGCGCACCCACAAGCAGCATCAGGTTGCGccgtcgcagcagcagcagcagtcgcagcagcaacagtcacagcagcagcggcgacagcagcagcatcagcagtcgcagcagcagcagctgcagcagcagagtCCCGCCCAGCAGCAACTGGTGGCCACCACGTTGTCCGGACGAGCGGAGAGCTACGAGAGCGATGCCAGCTGCTCCACGGACGCGTCCAGTGGACATAGTcacagtcgcagcagcagttccctcaaccacaacaacaacaacaacaacaactcgCACAAAGCTAACAACAACCTGAAGGacctggaggagctggagatgCCGGCTGAGGACCAGGATTCGGAGAGCAAGCAGCGTCGTCTGAAGACCACCATCAATAACAACATCATCGACAGCGAGCAGCAGGAGGATATGGGgcaggaggatgaggaggccGACGATGCGGATGTGGCCATGTTGACCAGCACACCCGATGTCGCCACTCTTCTGGCCGGCGCCAGTGCATCCGGCGCCGCCTCGCGTTCCGCcacaccatcgccatcgccatccgCCTCGCCTGCCCTGCTCCTCAGCTGCCCCGCCTGCGGAGCCTCCGAATTCGAGACCTTGCCCGCGCTGTGCGCCCACTTGGATGCGAGGCACTCAGACATACCCGCCAAGTGTCGGGACTGCGAGGTGATCTTCGCCAGCCATCGCCAACTGCAGGCGCACTGCTGCCGCTTACCCACCGCTCTGGGCGGTGGCTTACCGCCGCTCCTCGGATCCAGCAGCTCGCCATTGCACAACGAGGAGCCAGAGGATGACGGCCAGGGCGACGACGAGGATCTCGACCAGAAGGAGAGAATCGAGCGACAAAGCGAGGACTTTTTCCACCAGTTGTATCTGAAGCAGAAGACGGCAAATGGAGGCGGAGCCATCTCGCATCCGCCATCGCCCATCAAACACGAACCGGCGGACAGCAAGGATCTGGCCGATATACAGAGCATCCTGAACATGaccagctccagttccagctTTCTGCGCAACTTCGAGCAGTCGGTGAACACGCCCAGCTCCAGCCAGTACAGCCTGGACGGTAGGGatcaggaggaggaggcccaGGACGCGTTCACCTCGGAGTTCCGTCGCATGAAGCTGCGCGGCGAGTTCCCCTGCAAGCTTTGCACGGCCGTGTTCCCCAACCTTCGTGCCCTCAAAGGGCACAACAGGGTCCATCTGGGCGCAGTGGGTCCCGCTGGACCGTTTCGCTGCAACATGTGTCCCTACGCCGTCTGCGACAAGGCCGCCCTGGTGCGTCACATGCGCACCCACAACGGAGATCGTCCGTATGAGTGCGCCGTCTGCAACTATGCCTTCACTACTAAGGCGAACTGCGAGCGCCATCTGAGGAACCGCCATGGAAAGACCAGTCGCGAGGAGGTCAAGCGTGCCATTGTCTATCATCCGGCGGAGGACGCTGGCTGTGAGGATGGCAAGTCTCGGCTGGGTGATGACCTGGCGGATATGAGTTTCCGTTCGATCAGTCCCacgccaccgccgcctccgGTGAATGAGAGCAGCTCCCAGCTGAAGCACATGCTGCTCGGCGAGAATCACCTGGCTCCTGCTACCCAACAGCCGCCTCTGAAGATCCAGGTGAAGAGCCTCGACCAGCTGGTGGACAAGAAGCCAACAGCACCAGctccccagcagcagcaggagaagaGTGCAGCTGCCCTAGACTTCAGCATGGATGTTTTGGATCTCAGCAAGAAGCCAACTGGCGGAGCACCACTGACACCCGCCGTCACTCCCacacccacgcccacacccacTGCGGTGGCTCCAGTGGCGCCGGGCGGCGTTGGAACTCCTGACCTGGCCCTGACCCCCATtgagcagcaacagttgctgcTGGCCCAGCAGCAACTCTTTGGCGCTGGCGGAGATTACATGCAACAGCTGTTCCGCAGCCTTATGTTCCAATCGCAGACGCCGGGATTCCACTTCTTTCCCTTCATggcgccaccaccgccacaaGCAAATCCCGAGAAGCCACCGCTGGTGAGTCCACCCAACCGCCTCAATCCCATGCCCGTGGGCGTTGGAGTCGGCGTGCCAGTGCCACCTGGTGGTCCCGTCAAGATGGTCATCAAGAACGGAGTGCTAATGCCCAAACAGAAGCAGCGACGCTATCGCACCGAGCGTCCCTTCGCCTGTGAGCACTGCTCGGCGAGATTCACGCTGCGATCGAACATGGAGCGCCATGtgaagcagcagcatccgcagTTCTACGCCCAACGGCAGAGGAGTGGCCACCATGTGATGCGGGGCAGAGGTGCCTCCAGTGCCGCCGCTGCTgtcgccgccgcagcagctgcagctgccatGGGTCAGGTGCCGGTTGGTGGACCGCGATCCGCCGGATCTGGCTCCAATCACCATCATGGCCACGGCCACGGCTCCCATGGACATGCACCCATTTCGGAGGAAGTCAAGTACGCCATCCTGGCCCAGCAACTGAAGGCTCACAAGAACAGCGATCTGCTGCAGCAGGCTCTGGCCCACGGCTCCAGCAGTGTGTCCGGCAATCCACTCCTGCATTTCGGCTACCCACTCGCCAATCCCAGTCCCCTGCACAATGGCAGCCAGGGCAATGGCCAGGCCACCGCCATGGATGACGATGAGCCCAAGCTGGTCATTGACGAGGATGAAAACGAACATGATCATGAGATGGACGCGGAGGACGTGGATGACTTCGAGGAGGATGAAGACGAGGAGGAGATGGATGAGCCGGATGATGAGCCGGAGCTGATTCTAGACGAGCAGCCGGCCGAAAAGGAAGCCGCAGAGGAGCCGGAGCTGCCCAAGCCGCTAGAGCTTTTGGGCTCCAAGGAAGCGGCCCAAAAAATGGCCGAAACCATTTTGGAGCAGGCCATCAAGGCGGGCAAGCCATCGAGTCCAACTCCCGCCAAGGAGAACGCTCCGCCAGCTAATCCAAGCGTGGCCACAACCATGCAGGAGCCAGCCACAACCAATCCACCCAGTACCAATCCCAGCAGCTTGAAGACCATGATCGCTCTAGCGGAATCTGTGGGAAAATCGCTCAAAGAAGTGGCAAGTTCGCCGTTTAAGGATGAGTCCCAGGATCTGGTGCCAGTGGCCAAGCTGGTGGACAATGCCACCAGCCAGAACATGGGCTTCAGCTATTTCCGGCCCAGCGATGTGGCCAATCACATGGAGCAGAGCGACGAGGAGGGCCTGGTGGCCTCCGGCAGCGCCAGTGAGAGCAACAACAGTGGCACCGAGGACGtcaccagcagcagttccAGCAGCGAGCCCAAGAAGAAGTCCGCCTACAGCCTGGCCCCCAATCGTGTCTCCTGTCCGTACTGCCAGCGCATGTTCCCATGGAGCAGCTCACTGCGCAGGCACATCCTCACCCACACTGGCCAGAAGCCCTTCAAGTGCTCCCACTGCCCGCTGCTGTTCACCACCAAGAGCAACTGCGACCGTCATCTCCTGCGCAAGCACGGCAATGTGGAGTCGGCCATGTCTGTGTATGTGCCCACCGAGGATGTGAGTGAACCGATACCCGTGCCCAAATCGGTGGAGGAGAtcgagctggaggagcagcgacgtcggcagGAGGCGGAACGCGAGAAGGAGCTGGAACTGGAGCGCGAAAGGGAGTTGGAACGGGAGCGGGAGCTGGAAAGGGAGCGGGAGCTGGAAAAGGAGAAGGAACGCGAGCGCCAGCAGCTCATCCAAAAGCTGGCAGCTCAAATGaatgccgccgccgctgctgccgccgtcgCTGTTGCCTCAGCGGCGAATGGCAATGCAACTGGTGCGAATGGACCCATTGGCGATGCCCTGGCTGGCGGTGATCTGCCCTACAAGTGCCACCTGTGCGAGGGTTCGTTTGCCGAGCGTCTGCAGTGCCTGGAGCACATCAAGCAGGCTCACGCCCACGAGTTCGCCCTGCTCCTGGCCAAGGGCGCCATCGAGAACGAATCGCTGGAGCCTAATCCCCACCAGCAGCCGTCTCAGCAGGCGGTGCACTCCGATGACGAGGCACCCAATGGCGCGAACAGAGGCAAGTATCCGGACTACAGCAACCGCAAGGTGATCTGCGCCTTCTGCGTCCGCCGCTTCTGGTCCACGGAGGATCTGCGTCGCCACATGCGTACCCATTCGGGCGAGCGGCCATTCCAGTGTGATATCTGCCTGAGGAAGTTCACCCTGAAGCACAGCATGCTGCGGCACATGAAGAAGCACAGTGGCAGGGCCCACAATGGGGATACGCCGGGATCTGATTGCTCCGACGACGAGCAGGTGAGCAGCCCGCCCAGCACCCCTGCTCCCGCTCAGCCTGCCAGCGCCggcgccaacaacaacaacagctgccacaataacaataataacaacaacaacaataacaacaacaatggcagctCCAAGCTGGGACTGAAGCTCCACGATCTGCTGGACAAGGCCAGCGAGTGGCGGGCCAGCCGCCTGGGCGAGCACAAGGAGAACATGGGCGAGGCCACGCCATCGGGCGCAGGCGTCGCCGGTTCGGATCTGATTGGCAATCTGCTGGGCATCAGTGACCAGGGCATTCTCAACAAGCTGCTCTCCTCCCCCGACGAGGCGGCCAAACTTCTGGGTGTTGACAACAAGTGA
Protein Sequence
MLAAQQQQHNNNSTAESEMERQRRDSTTSESSLEHLDLGRTPKKLGGNSGSAQTTSTPHESTTVASSRKRKLRHLQMNHHQQQHSELLSDEEEAAADEEDEELEEDDDQVAALGSRSLGRHKQRRSGGASTQASIVVDYSSGDASSLRKKFRLNRSAASLSESGFVDASSTTGHSGYLGNSSSTANTTASSGIGAGAGAGAVAPSPVGGAATTAASSSSSGSSSGGSGGSSPQGLCLSSGESGIGAGDEHMKYLCPICEVVSATPHEFTNHIRCHNYANGDTDNFICRICSKVLSSASSLDRHVLVHTGERPFNCRYCHLTFTTNGNMHRHMRTHKQHQVAPSQQQQQSQQQQSQQQRRQQQHQQSQQQQLQQQSPAQQQLVATTLSGRAESYESDASCSTDASSGHSHSRSSSSLNHNNNNNNNSHKANNNLKDLEELEMPAEDQDSESKQRRLKTTINNNIIDSEQQEDMGQEDEEADDADVAMLTSTPDVATLLAGASASGAASRSATPSPSPSASPALLLSCPACGASEFETLPALCAHLDARHSDIPAKCRDCEVIFASHRQLQAHCCRLPTALGGGLPPLLGSSSSPLHNEEPEDDGQGDDEDLDQKERIERQSEDFFHQLYLKQKTANGGGAISHPPSPIKHEPADSKDLADIQSILNMTSSSSSFLRNFEQSVNTPSSSQYSLDGRDQEEEAQDAFTSEFRRMKLRGEFPCKLCTAVFPNLRALKGHNRVHLGAVGPAGPFRCNMCPYAVCDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHGKTSREEVKRAIVYHPAEDAGCEDGKSRLGDDLADMSFRSISPTPPPPPVNESSSQLKHMLLGENHLAPATQQPPLKIQVKSLDQLVDKKPTAPAPQQQQEKSAAALDFSMDVLDLSKKPTGGAPLTPAVTPTPTPTPTAVAPVAPGGVGTPDLALTPIEQQQLLLAQQQLFGAGGDYMQQLFRSLMFQSQTPGFHFFPFMAPPPPQANPEKPPLVSPPNRLNPMPVGVGVGVPVPPGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVMRGRGASSAAAAVAAAAAAAAMGQVPVGGPRSAGSGSNHHHGHGHGSHGHAPISEEVKYAILAQQLKAHKNSDLLQQALAHGSSSVSGNPLLHFGYPLANPSPLHNGSQGNGQATAMDDDEPKLVIDEDENEHDHEMDAEDVDDFEEDEDEEEMDEPDDEPELILDEQPAEKEAAEEPELPKPLELLGSKEAAQKMAETILEQAIKAGKPSSPTPAKENAPPANPSVATTMQEPATTNPPSTNPSSLKTMIALAESVGKSLKEVASSPFKDESQDLVPVAKLVDNATSQNMGFSYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVTSSSSSSEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPTEDVSEPIPVPKSVEEIELEEQRRRQEAEREKELELERERELERERELERERELEKEKERERQQLIQKLAAQMNAAAAAAAVAVASAANGNATGANGPIGDALAGGDLPYKCHLCEGSFAERLQCLEHIKQAHAHEFALLLAKGAIENESLEPNPHQQPSQQAVHSDDEAPNGANRGKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSGRAHNGDTPGSDCSDDEQVSSPPSTPAPAQPASAGANNNNSCHNNNNNNNNNNNNNGSSKLGLKLHDLLDKASEWRASRLGEHKENMGEATPSGAGVAGSDLIGNLLGISDQGILNKLLSSPDEAAKLLGVDNK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00605068;
90% Identity
-
80% Identity
-