Basic Information

Gene Symbol
NCOR1
Assembly
GCA_018150545.1
Location
JAECWL010000174.1:3392899-3397273[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1e-07 8.6e-05 22.4 0.0 3 43 393 433 392 435 0.97

Sequence Information

Coding Sequence
ATGGAGGCCATGCCCCACTACGCCAGCCAGCCAAATAGCACGTCCTTCCAGCAGCAGCAACAGCAAGGCGGTTCAGCGGCGTCCACGTCGTCGGCAAATAGTGGAAGCAATGCCTCCGGCGGAAGTGGCAGCGGAGCGGGAGTGGCCAGCACAGAGGCCTACCATCCGCAGGTGGAGGCCATTTCCCCGACCCTGCCCAGCGACAGTGCCATCGAGGAGCGCGGCAGGAGCAGTGCCAAGGAGGATCTCCTAATGCAGATCCAGAAAGTGGACAATGAGATCAAGACGGTGGAAACGGCAAAGGAGACGCTTCGCAAGAAGGAGAAGTCCCTGATGGAGGAGGCCTCGGTGGCCAAACAGCAGAAGACGGCCAAGGAGCTGGCCGAGACGAGTGCCGCCAATTCCAACCAGGAGGAGGAGGTGGTCGAGCTGGTTTGGCGCAGCCAGATGCTGGCCAAGAAGATCTATGCGGCCAATCGGAAGACGGCCCATGCTCAACATTCCATGCTGTCGAGTTTCCTTTGCATTTCCCTAATGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGCTGCTGAAGCCGTGGCTGCCGCTCTACAACCAGCCCCTGGACGTGGGAGCCTTGACCGTTCTCATCCAGCAGCATCAGAACTTGGTGCGTGGCCCCCTCCTGACGCACATCCGGAAGCTGAAGGCGGAGCGTTGGGCGCACAACCAGACGCTGGTGGAGAAGTACGCCAAGGAGCAGGCGGACTGGCAGCGCCGATGCGAGCGAGCGGAGGCGAGTGCCAAGCGGAAAGCTCGCGAGGCCAAGAATCGCGAATTCTTCGAGAAGGTCTTCACGGAGCTGAGGAAGCAGCGCGAGGACAAGGAGCGCTTCAACCGTGTCGGCTCGCGCATCAAATCCGAGGCGGATCTCGAGGAGATCATGGACGGACTGCAGGAGCAGGCGCTCGAGGACAAGAAGATGCGATCGTATGCCGTGATACCGCCACTGATGCACGATGCCCGGCAGCGGAGGTGCGCCTACCACAACGAGAACGGGCGGATCGAGAACATGCTGGCGGTGCACCAGCAGCGCAAGGCACTGAACATGTGGACGGCGGGGGAGAAGGAGACGTTCAAGGAGAAGTATCTGCAGCATCCGAAGAACTTTGGCGCCATTGCGGCCAGTTTGGACAGGAAGTCGCCGCAGGATTGCGTCCGCTACTACTACCTCAGCAAGAAGACGGAGAACTACAAGCAGTTGCTCCGCAAGTCCCGCCAGCGCACCCGCAGCTCACGCAACCCCGCCAAGGCGCAGGCTGTCCAGCCCCAGTGCATCATTGATTCGATGACCACCGGCGTGATGACCCGCCTGCAGCGGGAGCAGCAGCAGAAGAGCGGCGGTCGCTCCTCGGCAGTGGGCGAGCGCGAACGGGCCGAGCGTGCCGCGGAGCGAGAGCGTGTGGCCGAAAAGGCGGCGGCGGATGCGGCCAAGGCGGCCGAGTGTGCCGCGGAGAAGGCCAGTGCCGCCAGCAAGGCCGTCGAGGTCAATGCAGCCGGCGAGCGTGTGGCCAAGGCGGCGGCAGCGGCAGCAGCAGCGGCGGCTGCAGCAGCAGCGACCACGTCAACGGGTGGCAGTTCCAGCACCGCCACCACATCACCCGCCACCGGAACCGCAACTGACAAGACCGAAGCCGACAAGGCGGGTTCCGGATCGGGAGCAGCATCCTCCGCACCAGCCACCGCCACACCATCAGAGATCTCAGCGGGCAGCGGTGGTGATTCGTCAAAGACCCAGAAGTCCGATGAGGAGGCAGGCGGAGCATCAGCCAGTGGAAGTGCAGCCGGTGGAGCGGCAGCAGCCAGTGCCGGATCTAATGATGCCTCCGCGGGCAAAGTCGACAATTCCAGCAGCTCGGAAACAGCTTCCGGCAAGGGTGCGGGCAAGGAAATCGAATCCAACGACTCGCTGGCCAAGAATTCGGGTCAGAAGGGTCACTCCGAGAACTATAATGCCACTGGAAACAATGCAACAGCAGGCGCTGCTGGAGCGGCTCAGGGCGTAACCTTGAATGGATTCAAGCCAGGCTACCATCATTCCGTGGTAATGGCCAATGTTAAGGTCGCACCGGGCACCGACGAATCCCAAGCAACAGCATCGATTGGAGGCGATAAAATCGCCAAGACTGCGTCCACGACAGCGGCATCGGGTGAGGGAGCTCCAGCCAGTGGAGGAGGAGCTGGAGGAGTACCTACTCTGACCACCGCCACCACGGCGGGCAATTATCTGGGACAGAAACTGAAGGCCGCTCAGGTGGAGGGCATGGGAGCTGGCAATGATTTGCATTCAGATGTTAGTGACTCTAAACGTAAACGTTTCGATCTGAATCCCGGGGACTCGTCTTCGTTGGTGAACGCCACGAGCAACGCCTCTTCCGGAGGATCCACCAACAGCAACAGTTTGAAGGCCAATGCCAAGGATGCGACCAAGTCGTCCTCCTCAGCATCTGCCACCGCGTCCTCTGCGACCACCACATCGGTGTCCGCCTCCTCGGCCTCATCCTCGGCTCCAATGTTACTGATTAGCGCCGCCTCGATCATGTCCACCGGCGTCATGACGTCGGGAACCACCACAGCCACGGCCACAGCGATATCGATGCCTCTACTGGCGGATGGCAGTGCCGGAAATGTCAATTCCATGGCCAACTCCTCAGAGATTCTAGCCTTGGATGGAAAGGGTAAGTCCATGAATTCTTATTTTTATTATGAAAATCGGGAGGAATACTTTAAAGAGGGATTTGAGGGAACAAAGTTTTGCATTTTTGTGGGAAGACCCTTTGTATTATCGATTTCTATCGATTTCTAG
Protein Sequence
MEAMPHYASQPNSTSFQQQQQQGGSAASTSSANSGSNASGGSGSGAGVASTEAYHPQVEAISPTLPSDSAIEERGRSSAKEDLLMQIQKVDNEIKTVETAKETLRKKEKSLMEEASVAKQQKTAKELAETSAANSNQEEEVVELVWRSQMLAKKIYAANRKTAHAQHSMLSSFLCISLMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLKPWLPLYNQPLDVGALTVLIQQHQNLVRGPLLTHIRKLKAERWAHNQTLVEKYAKEQADWQRRCERAEASAKRKAREAKNREFFEKVFTELRKQREDKERFNRVGSRIKSEADLEEIMDGLQEQALEDKKMRSYAVIPPLMHDARQRRCAYHNENGRIENMLAVHQQRKALNMWTAGEKETFKEKYLQHPKNFGAIAASLDRKSPQDCVRYYYLSKKTENYKQLLRKSRQRTRSSRNPAKAQAVQPQCIIDSMTTGVMTRLQREQQQKSGGRSSAVGERERAERAAERERVAEKAAADAAKAAECAAEKASAASKAVEVNAAGERVAKAAAAAAAAAAAAAATTSTGGSSSTATTSPATGTATDKTEADKAGSGSGAASSAPATATPSEISAGSGGDSSKTQKSDEEAGGASASGSAAGGAAAASAGSNDASAGKVDNSSSSETASGKGAGKEIESNDSLAKNSGQKGHSENYNATGNNATAGAAGAAQGVTLNGFKPGYHHSVVMANVKVAPGTDESQATASIGGDKIAKTASTTAASGEGAPASGGGAGGVPTLTTATTAGNYLGQKLKAAQVEGMGAGNDLHSDVSDSKRKRFDLNPGDSSSLVNATSNASSGGSTNSNSLKANAKDATKSSSSASATASSATTTSVSASSASSSAPMLLISAASIMSTGVMTSGTTTATATAISMPLLADGSAGNVNSMANSSEILALDGKGKSMNSYFYYENREEYFKEGFEGTKFCIFVGRPFVLSISIDF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
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