Basic Information

Gene Symbol
NCOR1
Assembly
GCA_017639315.1
Location
CM029945.1:3604232-3613077[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.4e-08 9.3e-05 22.4 0.0 3 43 400 440 399 442 0.97

Sequence Information

Coding Sequence
ATGTTTGGCGGTTCGATGCCGGCCGGGAATCNNNNNNNNNNNNNNNNNNNNNNNTTGGCGGGATTGCCGGCTGGTTCTGTGACGGTATCCACGGCGAGATCCTCATCGGTGGCCACCTCGGCCTCGAATAGTGGCAGCAACGCCTCCGGGGGCAGTGGCAGCGGAACGGGAGTGGCCAGCACCGAGGCCTACCATCCGCAGGTGGAGGCGATATCCCCAACACTGCCCAGCGACAGTGCCATCGAGGAGCGGGGCCGGAGCAGCGCCAAGGAGGATCTCCTCATGCAGATCCAGAAGGTGGACAATGAGATCAAGACGGTGGAAACGGCCAAGGAGACGCTTCGGAAAAAGGAGAAATCCCTCATGGAGGTGGCATCGCTGGCCAAGCAGCATAAGACCGCCAAGGAGTTGGCGGAGGCGAGTGCCGCCAATGCCGCCAATCAGGAGGAGGAAGTGGTGGAGCTTGTATGGCGGAATCAGATGCTAGCCAAGAAGATCTATGCCGCCAATCGGAAGACGGCTCATGCTCAACATTCCATTCTCTCCCGTTTTATATCCTTAATTGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATGAAGCCATGGCTACCACTTTATAATCAACCCTTGGACGTCACCGCCCTCACCGTTCTCATCCAACAGCATCAGAATCTGGTACGTGGTCCACTCCTCCTCCATATCCGGAAGTTGAAGGCCGAAAGATGGGCCCACAACCAAACGCTGGTGGAGAAGTACGCCAAGGAGCAGGCCGACTGGCAGCGGAGGTGCGAGCGGGCGGAGGCGAGTGCCAAGCGGAAGGCGCGCGAGGCCAAGAATCGGGAGTTCTTCGAGAAGGTATTCACGGAGCTGAGGAAACAGCGTGAGGACAAGGAACGCTTCAATCGAGTCGGATCACGGATCAAATCGGAGGCAGATCTCGAGGAGATCATGGATGGGTTGCAGGAGCAGGCGCTGGAGGATAAGAAGATGAGATCCTATGCCGTTATACCGCCACTGATGCACGACGCCCGGCAGCGGAGATGTGCCTACCACAATGAGAATGGCCGGATCGAGGACATGCTGGCGGTCCATCAGCAACGGAAGGCCCTCAACATGTGGACGGCCGGGGAGAAGGAGACGTTCAAGGAGAAGTATCTGCAGCATCCGAAGAACTTTGGAGCGATTGCGGCCAGCTTGGATAGGAAGTCGCCGCAGGATTGCGTCCGCTACTACTACCTCAGCAAGAAGACGGAGAACTACAAGCAGTTGCTCCGCAAATCCCGCCAGCGCACCCGCAGCTCCCGCAATCCGGCCAAGGCCCAGGCTGTCCAGCCCCAGTGCATCATCGATTCAATGACCACCGGTGTGATGACTCGCCTGCAGCGGGAGCAGCAGCAGAAGAGCGGCGGCCGATCTGCGGCGGTTGGGGAACGGGAGCGGGCCGAACGGGCGGCGGAACGGGAACGGGTCGCCGAAAAGGCAGCGGCCGATGCGGCCAAGGCGGCGGAGAGCGCCGCCGAGAAGGCCAGTGCCGCCAGCAAGGCGGTGGAGATCACAGCCGCCGGCGAACGAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACACCGTCAGAGATCTCAGCGGGAAGCGGTGGTGATGCCGCCTCGAAGGGCCAGAAATCCGATGAGGAGGCGGCAGGAGCTACTGCCGGAGGAGTGGTGGCACCCGCTAATGACGCCACTGCGGGCAAGGCTGACAACTCTGGCATCTTGGAAGCCGGCAAGGGCAAGGAGACCGAAGCCAATGACTCGCTGGCCCAGAAGTCCAGCCAAAAGGGCCATCCCGATAACTACAATGCTACTGGCAGCAATGCCACTCCGGGAGGTGGAGCTGGAGCGGCACAGGGCGTGACCTTGAATGGCTTCAAGCCCGGCTACCATCACTCCTCCGTGGTGATGGCCAATGTGAAGGTCCAGCCACCAGGCAGTGAGGAGACCCAAGGAGGAGCAGCCTCCACTGCTGGCACCGACAAGATCGTAAAGACCACCGGAGCCGTCGGAGCAGGAGCGGAAGGAGCACCCTCCAGTGGAGCAGGAGCAGGAGCAGGAGCCGGAGGAGTGCCCACTCTCACCACCGCCACCACGGCGGGCAACTATCTGGGCCAGAAACTGAAGGCCGCCCAGGTGGAGGGCATGGGAGCCGGCAATGACCTCCATTCGGATGTTAGTGACTCCAAACGTAAACGCTTCGAACTGAACCCCGGGGAGTCGGGTGCCACCAACAATGCCTCATCCGGCGGAGCCACCAACAGCAACAGCCTGAAGCCGAACGCCAAGGACCAGGCGACCAAGTCGTCCTCCTCAGTCCCTGGCACTGCATCCTCCGCTACTCCCACTTCCTCGTCCGCTTCCTCTTCGGCCGCGTCCTCGGCTCCGATGCTACTTATTAGTGCCGCCTCCATCATGTCCACCGGGGTCATGACCTCCGGAACCAACACCGCCACCGCCACGGCGATATCGATGCCTCTGCTGGCGGACGGAGGAAACCTCAACTCCATGGGCAACTCCTCCGAGATTTTGGCCTTGGACGGCAAAGACCAGGACCAGGGCGAAAAAGAGTTGACAGAACCACCCACCCATCCGGCCAGGCGACTGGTCCTGGACTGGTCTTGCGGTTTTGTTTGCACCACCAGGCCACCACCCACCAGGGCAACCACCCACTTATCCTGA
Protein Sequence
MFGGSMPAGNXXXXXXXXLAGLPAGSVTVSTARSSSVATSASNSGSNASGGSGSGTGVASTEAYHPQVEAISPTLPSDSAIEERGRSSAKEDLLMQIQKVDNEIKTVETAKETLRKKEKSLMEVASLAKQHKTAKELAEASAANAANQEEEVVELVWRNQMLAKKIYAANRKTAHAQHSILSRFISLIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKPWLPLYNQPLDVTALTVLIQQHQNLVRGPLLLHIRKLKAERWAHNQTLVEKYAKEQADWQRRCERAEASAKRKAREAKNREFFEKVFTELRKQREDKERFNRVGSRIKSEADLEEIMDGLQEQALEDKKMRSYAVIPPLMHDARQRRCAYHNENGRIEDMLAVHQQRKALNMWTAGEKETFKEKYLQHPKNFGAIAASLDRKSPQDCVRYYYLSKKTENYKQLLRKSRQRTRSSRNPAKAQAVQPQCIIDSMTTGVMTRLQREQQQKSGGRSAAVGERERAERAAERERVAEKAAADAAKAAESAAEKASAASKAVEITAAGERKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPSEISAGSGGDAASKGQKSDEEAAGATAGGVVAPANDATAGKADNSGILEAGKGKETEANDSLAQKSSQKGHPDNYNATGSNATPGGGAGAAQGVTLNGFKPGYHHSSVVMANVKVQPPGSEETQGGAASTAGTDKIVKTTGAVGAGAEGAPSSGAGAGAGAGGVPTLTTATTAGNYLGQKLKAAQVEGMGAGNDLHSDVSDSKRKRFELNPGESGATNNASSGGATNSNSLKPNAKDQATKSSSSVPGTASSATPTSSSASSSAASSAPMLLISAASIMSTGVMTSGTNTATATAISMPLLADGGNLNSMGNSSEILALDGKDQDQGEKELTEPPTHPARRLVLDWSCGFVCTTRPPPTRATTHLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00503930;
90% Identity
-
80% Identity
-