Basic Information

Gene Symbol
-
Assembly
GCA_018150345.1
Location
JAECWI010000047.1:6450097-6451767[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.4e-09 3.2e-06 27.5 0.0 25 88 170 224 124 225 0.83

Sequence Information

Coding Sequence
ATGCGCCAAACAACTGATTGGAGCGAGTATGCCGAAAAGGTTTTCGCGCCACATCGAGAAAAAACACCTTGGCGATGGCGCACCGGGAAAAAACGCCTTTTTGAGGCGAGCCCCAGCAAATCGGGGCAGGAACCTCGACGGAATCCGACACCACCACCATTGTCGGGGATCGAAGGCCATGTGGAGGAGGATGAGCCACTACCGACACCACCACCATTGTCGGATGAGCCACTACCGCCGCCTCCACCATTGTTCTGGATCGAAGGCCATGAAAAGCCACTACCGCCGCCTCCACCATTGCCGGAGATCCATTGCGTTGAGGAGGATGAGCCACTACCGACACCACCATCATTGTCGGGAATCGAAGGCCATGACGAGGAAAATGAGCCACTACCGCCGCCTCCACCAACTTGCTTATCTGGCTCAAAAGGGCTAATTTGGCAAACACAGCCAATTAAGAAGAAAGTCTTTTTCGAAAGACTGGGTCCAGCCAACGACCCCGAGGAGCTTTTGAAGAAGCACCCAATTTGCCTCTTCACCATGTTTGAGTCTGTTCGGAGGCAAGGAGGCTTCAGACACGTGACTTCTTGGCCTCTGGTCGCTATGATGACTGAGGTCTCATATTCCGAGGAAACTCTAAAAAACATTTACTCCTCTCTTTTCCTGGAATTCCAGTCAAAGGAATTCAAGAGGATTGACGAGTTAAAGTCCCTTGTTATCCCGGATTGGTTCGACAACGGCCAATTGATCGGATACCAAAACTTTAACATCCACATGCCCCGAAACTCACAAAGTCCGGCTATCGTCAAAAGATTTTGGACAAAATATATGCAAATTATTTTGTTGCAAACCAAGAGTCTGGCAGTGGTTCCAGTGCACTGA
Protein Sequence
MRQTTDWSEYAEKVFAPHREKTPWRWRTGKKRLFEASPSKSGQEPRRNPTPPPLSGIEGHVEEDEPLPTPPPLSDEPLPPPPPLFWIEGHEKPLPPPPPLPEIHCVEEDEPLPTPPSLSGIEGHDEENEPLPPPPPTCLSGSKGLIWQTQPIKKKVFFERLGPANDPEELLKKHPICLFTMFESVRRQGGFRHVTSWPLVAMMTEVSYSEETLKNIYSSLFLEFQSKEFKRIDELKSLVIPDWFDNGQLIGYQNFNIHMPRNSQSPAIVKRFWTKYMQIILLQTKSLAVVPVH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00503043; iTF_00503042;
90% Identity
-
80% Identity
-