Basic Information

Gene Symbol
-
Assembly
GCA_018150345.1
Location
JAECWI010000703.1:410661-411771[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.4e-10 6.1e-07 29.8 0.0 25 88 199 253 167 254 0.83
2 2 4.3 4.1e+03 -1.7 0.0 65 85 287 310 281 312 0.58

Sequence Information

Coding Sequence
ATGCCTGTGTGCAACTTTTGTGATTACGAGTCCACGAGACTCTCCAACGTGAAGCGCCACATCGAGAAAAAACACCTTGGCGTTGGCGCACCGGTAAAAAAACGCCTTTTTGAGGCGAGCCCCAGCAAATCGTGGCAAGAACCTCGACGGAATCCGACACCACCACCATTGTCGGGGATCGAAGGCCATGAGGAGGAGGAGCCACTACCGACACCACCACCATTGTCGGATGAGCCACTACCGCCGCCTCCACCATTGTTCTGGATCGAAGGCCATGAAAAGCCACTACCGCCGCCTCCACCATTGTCGGAGATCCATTGCGTTGAAGAGGATGAGCCACTACCGACACCACCATCACTGTCGGGAATCGAAGGCCATGACGAGGAGGATGAGCCACTACCGCCGCCTCCACGTCCACCTGTTTTGGAGGAAGAAAATAGCGAGTCGGAGTCCGACTCCGAATTTCACTTTCGCGCCCTGCCAAAGAAGCAGCAACTTGCATATCTGGCTCAAGAAGGGCTAATTTGGCAAACACAGCCAATTAAGAAGAAAGTCTTTTTCGAAAGACTGGGTCCCGTTAACGACCCCGAGGAGCTCTTCAAGAAGCACCCGATTTGCCTCTTCACCATGTTTGAGTCTGTTCGGAGGCAAGGAGGCTTCAGACACGTGACTTCTTGGCCTCTGGTCGCTATGATGACTGAGGTCTCATATTCCGAGGAAACTCTAAAAAACATTTACTCCTCTCTTTTGCTGGAATTCCAGTCAAAGGAATTCAAGAGGATTGACGAGTTAAAGTCCCTTGGTATCCCGGATAGGTTCGACAACGGCCAATTCATCGGATACCAAAACTTTAACATCCACATGCCGCAAAACTCTCAAAGTCCGGCAATCGTCAAAAAGATTTTGGACAAAATATATGCAAATTATTTTGTTGCAAACCAAGAATCTGGATCCCTATTCTGGGTGAAGGACTCGTGGGTGGCGGACACCAAAATGGCACCAGAGGCCATAACTAAAGCGATGGAGAAAATGGGTATGATTTAA
Protein Sequence
MPVCNFCDYESTRLSNVKRHIEKKHLGVGAPVKKRLFEASPSKSWQEPRRNPTPPPLSGIEGHEEEEPLPTPPPLSDEPLPPPPPLFWIEGHEKPLPPPPPLSEIHCVEEDEPLPTPPSLSGIEGHDEEDEPLPPPPRPPVLEEENSESESDSEFHFRALPKKQQLAYLAQEGLIWQTQPIKKKVFFERLGPVNDPEELFKKHPICLFTMFESVRRQGGFRHVTSWPLVAMMTEVSYSEETLKNIYSSLLLEFQSKEFKRIDELKSLGIPDRFDNGQFIGYQNFNIHMPQNSQSPAIVKKILDKIYANYFVANQESGSLFWVKDSWVADTKMAPEAITKAMEKMGMI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00503046;
90% Identity
iTF_00503043;
80% Identity
-