Basic Information

Insect: Drosophila eohydei
Gene Symbol: -
Assembly: GCA_035045825.1
Location: JAWNOT010000097.1:15647011-15662760[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.7 1.2e+02 3.5 0.9 3 21 472 490 470 494 0.91

2 14 0.25 17 6.1 0.4 2 23 516 538 515 538 0.94

3 14 0.045 3 8.5 1.0 1 23 555 578 555 578 0.95

4 14 0.52 35 5.1 0.5 1 21 583 603 583 607 0.90

5 14 0.034 2.3 8.9 0.2 2 23 658 680 657 680 0.92

6 14 0.49 33 5.2 0.1 1 21 685 705 685 706 0.92

7 14 2.9 2e+02 2.7 1.2 2 23 725 746 724 746 0.90

8 14 9.1e-05 0.0062 16.9 2.2 2 23 759 779 758 779 0.97

9 14 0.00057 0.039 14.4 2.0 1 23 785 808 785 808 0.97

10 14 0.0004 0.027 14.9 0.5 1 23 839 861 839 861 0.98

11 14 2.4 1.6e+02 3.0 0.2 1 23 868 892 868 892 0.89

12 14 0.19 13 6.5 4.0 1 23 897 921 897 921 0.97

13 14 0.00082 0.056 13.9 2.1 1 23 934 956 934 956 0.97

14 14 0.0022 0.15 12.6 4.6 1 20 962 981 962 983 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.7	1.2e+02	3.5	0.9	3	21	472	490	470	494	0.91
2	14	0.25	17	6.1	0.4	2	23	516	538	515	538	0.94
3	14	0.045	3	8.5	1.0	1	23	555	578	555	578	0.95
4	14	0.52	35	5.1	0.5	1	21	583	603	583	607	0.90
5	14	0.034	2.3	8.9	0.2	2	23	658	680	657	680	0.92
6	14	0.49	33	5.2	0.1	1	21	685	705	685	706	0.92
7	14	2.9	2e+02	2.7	1.2	2	23	725	746	724	746	0.90
8	14	9.1e-05	0.0062	16.9	2.2	2	23	759	779	758	779	0.97
9	14	0.00057	0.039	14.4	2.0	1	23	785	808	785	808	0.97
10	14	0.0004	0.027	14.9	0.5	1	23	839	861	839	861	0.98
11	14	2.4	1.6e+02	3.0	0.2	1	23	868	892	868	892	0.89
12	14	0.19	13	6.5	4.0	1	23	897	921	897	921	0.97
13	14	0.00082	0.056	13.9	2.1	1	23	934	956	934	956	0.97
14	14	0.0022	0.15	12.6	4.6	1	20	962	981	962	983	0.95

Sequence Information

Coding Sequence: ATGAACTCGGAATCGGACGATCTGGAGGACACGCACCTGTGCATCAAGTGCAATGCGACGATTGTGGGTCTGCGCAAATACATAGATCATCGCAAGCAGAATTGTCTGAGCATTGCCGGCAACGAGCGCAAGCAGAAGCCAATGGTGGCCAGGACAACGACAGCTTCTGGTGCGGAGCATGCGGCGTCTGCAATCATAAGTCGCGCCAATTTGGAGCACAGCTACGATGGCTTTCACTTCGCAGAGCCGGAGGCGCCGAGCAGTTACTTGCGCAAGACGACGGCCAGCCATGGTGGCAAGACGTCCAAGGCCCTGACCGAGGCTTATGATCCTACCTACGAGCTGGGCGCTGATGTCTTCTTTTcctcgctgcagctgcagagcgTCTCGACGGGCGGCAAGACGGGTGCACGGCCCGAGCGTGGCGCCAAGGAGGAGCACAACTGGCATTCATCCAGCAACTGCTCCGATCCACTGCTGAAGGCGGTGCGGGAACATGAGGAATCCGACTTTAAGCCGCTTAAGTTCGTGCACTCACCAGAGGCGAGCGAGGAAGAGGAGGATGACGAGGAGCCCGACGACTTTGATGGCGATGATGACGAAGCAGATCATATGCacgagcaggagcaggaccAAGAACATGATCACGATCCTGATCCCGATGAAGATTACGATGGGCGACGCCACTCGCCGCCGACTGTGCCTGCCACGCACACAGGTGGCAAGTGGAGGCCGGAGCACCGACCACAGTTGCGCCACACGCATCTGGAGCGCATCTCGCCCAGCTGGGATGAGCCGCCCGAAGATGCGCACGATCATCCACCCGCCGAGCACACGCACGGCAAGTGGGTGCCGGGCAGCAAGCAGCTGGAGTATCGGGAAAACATTGATCTGAccaagctgcagcagccggaCGCCAGCTACTGGTGCAACATCTGTTGTCGCCGGCTCAAGACGCGCCTCAACTACGATCAGCATCTGCGCAGCGGCTACCATCTGCGGCGCGCGGATGCTGAGTGCCAATTGGAGCAGGCCAACCTCGAGTCCGCCAATCTGACGCTCAACAAGAACTTTGCCCAGCCGCCGGCTCCTGCAacggagcaactgcagcgacgtcgtcgtcgtcgtgccAATCTCTTGCGCTGCGAACTGTGCCGCCACAGCATGGCGCGCCATCTCATGGGCAAGCACCTGATCTCCCACTATCACTATCGacgcctgcagcagcagcagcagctgcgcagcCAGAGCTCGCTGCACGCCATCCTGGAGCACATGGGCAGCATTGTGCGACAGGCGCCATTCCAGTGCCTGCCCTGTCGATTCTATGCCAACACTGAGCAAACTTTTCAGGCTCATTGGCGCTCGCCTGCTCATGTGGAGCTGACCGGGCGACTTGGCGGCACTTTCTGGTGCAGCTACTGCCAGTTCGAGTGCGACAGCAACGAGGAGATGTGGCAGCATCTGCTGGGCAACACGCACAAGGAAGTGCTCTTTGCGATCAATCGATCGGTGCCCGTTTGCATTGCTCAGCGGCGTCATCTGAGCTGCTCCGAGTGCAGCGCCAGCTTTCTCTACAATCTGCAGCTGCGGCGGCATTTCGCCACGGAACATGCAGGCGTCGTGGCCACGGGCAGCGCCTCGGATGAGTACCAGTGTCGCTTCCGCTGCCAGATTTGCGGAGCTGCCCAAAGATCGCGCGTGGCGCTGCAGCGCCACGAGAAGCACAAACATCGTCTGGCCAAATATTATTGCGCCCTTTGTCATTTGGAGTTCGAGACGCCGCTGGCTGCTCGCCGGCATCGCAGTCTCATGCAGCACAAGCAGCATGCGAATCGTCGGCGCAGTCGCAAACGCAGCAGCTCCAAGCAACCGGCGCccgaaatggaaattgagcACATGCTGCGCGAGGTGCTGGAGGATGAGGCTGCGCAGCCGACGACGAGCTCCGAGGAGCGGCGCCCGAGCAGCCAATGTGTGAGCTGTCAGCTGAGCTTTGAGACGTCCCAAGCGCTGATTCAGCATCGCAGCGAAGCACATCCCATGGACAATCATGCCTGTCTCAGCTGTGGCGGCAGCTTTCAGTCGGCCCAGGCGCTGGGGCGGCACACGCGCAGCTGCCAGCCCATTGCCTCGACCTCGGCGGCTGCGTCGGCTCGTTCAGCGTCCTGGCACTGCGATCAGTGCGGCTTCAGTGCGCAATACGAATCAGATCTGCTCTATCATCGCTTCTTTCACACACGCGGCTCCTCCATTGGCAAGGACGAGCTGCTGCAGTGTCCGCTCTGCCCCAAGCAATTCCGCAAGCACTCGCTGCGTGCCCATCTGCGCAATCACACGAACGAACGCATCTTCGAGTGTGCCGAGTGCCTATCCAAGTTCGCCAGGCGACACAATCTGAAGAGCCACATGGCCACCAAGCATGGCCAGCGGGCACAGACGGAGCCAGACGGCGCCCAGACAACAGCTAAGCAGACGACGACTaagacgacaacgacgaaGCCCAAGCAGAAGTTTCAATGTGGCACTTGCGGCAAAATATTGGCCAAAAAatATTCACTTAAACTGCACGAGATGAGCCATGCCACGCCGAAGCGGCAATTCCCTTGCCCCCACAAGGACTGTTCCTTCGCCGGTCTCACGCCGGAGGGCCTCAAAATCCATCTCAAGTCCCACTCCCAGGGCACGCACAAATGTGAACGCGAGAACTGCAGCTACGTGGGCAAGAGTGAGCTGCACCTGAAGCGGCACCTCAAATCGCATTCGAGTGGACCAGAGCTGGCGGAGAGTGGCAAATGGTTCGCGTGCGATCAATGCGAGTTCAAAGCGCGAGTCAAGGGTCACCTCAATCGTCACATGCGCCGACATACCGGAGAGAAGCCCCATAAATGTCCCCACTGCGACTTCCAGTGCAGCAGCTTCGACAATCTACGCAAACACATCGTAAAGACAGGAAAACATCCGGGCAAGTTCATCTACGAGTGTTCGACCTGTACAGCATTTAAGGGCAACAGCTTTAAGGACTATCAGATGCATTTGAGCACCCATAAAACGGAAAATCCATGA
Protein Sequence: MNSESDDLEDTHLCIKCNATIVGLRKYIDHRKQNCLSIAGNERKQKPMVARTTTASGAEHAASAIISRANLEHSYDGFHFAEPEAPSSYLRKTTASHGGKTSKALTEAYDPTYELGADVFFSSLQLQSVSTGGKTGARPERGAKEEHNWHSSSNCSDPLLKAVREHEESDFKPLKFVHSPEASEEEEDDEEPDDFDGDDDEADHMHEQEQDQEHDHDPDPDEDYDGRRHSPPTVPATHTGGKWRPEHRPQLRHTHLERISPSWDEPPEDAHDHPPAEHTHGKWVPGSKQLEYRENIDLTKLQQPDASYWCNICCRRLKTRLNYDQHLRSGYHLRRADAECQLEQANLESANLTLNKNFAQPPAPATEQLQRRRRRRANLLRCELCRHSMARHLMGKHLISHYHYRRLQQQQQLRSQSSLHAILEHMGSIVRQAPFQCLPCRFYANTEQTFQAHWRSPAHVELTGRLGGTFWCSYCQFECDSNEEMWQHLLGNTHKEVLFAINRSVPVCIAQRRHLSCSECSASFLYNLQLRRHFATEHAGVVATGSASDEYQCRFRCQICGAAQRSRVALQRHEKHKHRLAKYYCALCHLEFETPLAARRHRSLMQHKQHANRRRSRKRSSSKQPAPEMEIEHMLREVLEDEAAQPTTSSEERRPSSQCVSCQLSFETSQALIQHRSEAHPMDNHACLSCGGSFQSAQALGRHTRSCQPIASTSAAASARSASWHCDQCGFSAQYESDLLYHRFFHTRGSSIGKDELLQCPLCPKQFRKHSLRAHLRNHTNERIFECAECLSKFARRHNLKSHMATKHGQRAQTEPDGAQTTAKQTTTKTTTTKPKQKFQCGTCGKILAKKYSLKLHEMSHATPKRQFPCPHKDCSFAGLTPEGLKIHLKSHSQGTHKCERENCSYVGKSELHLKRHLKSHSSGPELAESGKWFACDQCEFKARVKGHLNRHMRRHTGEKPHKCPHCDFQCSSFDNLRKHIVKTGKHPGKFIYECSTCTAFKGNSFKDYQMHLSTHKTENP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00531326;
90% Identity: iTF_00520260;
80% Identity: -