Deoh010541.1
Basic Information
- Insect
- Drosophila eohydei
- Gene Symbol
- lov
- Assembly
- GCA_035045825.1
- Location
- JAWNOT010000072.1:21891954-21903076[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1 7.6e+03 -3.3 0.0 23 36 318 335 318 339 0.63 2 2 1.3e-18 2e-15 56.2 0.0 1 44 884 927 884 928 0.96
Sequence Information
- Coding Sequence
- ATGTTAAAGGACGCCGAGGAGCTGATAAAACGCTGCAAACtgacgtcgctgccgctggcgCTGCATATGAACGAATACGGCCGCCAGGTGGCGCCAGCGCCACTTgcagcgctgccgctgctggccaagCCCACCAACACGCCGCCGGTGGGTGGGGGCGTGACTTCGGGAGCGGGAGCGGGATCAGGAGCGAGCGCCATCtctgatcatcatcatctacACACGCATCatcagctgccgctgccggtGTCTTTGGCGCTGCCTATGCCGGTGACATCGacacacagccacgcccatgccTCGATGCATACGACGCCACCCACAACGCCGCCCACGCCGCCAGCTCTGCCGCTCAACATGAGCCAAAcggcaagtgcagcagcagcaactgccgtagctgccacgcccacaacaacGCACAGTccacctgccacgcccacagcagtGAGCGCCGCCCTGGCGGCCACACAGGATCATTACAGCCTGCGCTGGAACAACCATCAGAATCACATCTTGCGCGCCTTCGACGCTCTGCTGCAGACCAAGACGCTGGTGGATGTGACCCTCGTCTGTGCAGAGACCTCGATACGTGCTCACAAGATGGTTTTGTCCGCCTGCTCGCCCTTCTTTCAGCGCGTCTTTGCGGAGACGCCCTGCAAGCACCCAGTCATAGTGCTGAAGGACTTCCGCGGCTGGGTCGTTCAGGCTATTGTGGACTTCATGTATCGAGGAGAGATCAGTGTGCCCCAACAGCGCTTGCAGACGCTCATACAGGCAGGTGAATCGCTGCAGGTGCGCGGCTTGGTCGAGAGCTCTGTACCGGAGCATACGCCCACGCCGGCCGCCTCGCCGGACGACTTTAATCTGTTGGACGCCTCACTACTTTCATCCAGCTACGAGGACGAGTCACCTTCGATGGTGAGGCCATCGAGTGGCAAGCTGATCATGCCCAGTCGCCTCTTTGGCAGTCCGGCTAGCACGATGGCGGCGCTTAGTATGCGTCGCAAGCGGGAGCAGGAGTGCGAACGGGAGCCGGAGAGCGACCAGGAGCTGGGCGGCAGTTCGCCCATGCCACGTCGCAAGCAGGCGCGGCCACGTCGACGATCCGGCGATGTGCCACACGATTTTGCGCTCAACAAGCCAGAGACGTCGGAGTCGGCGCTGCAAACTGTGATCAAACACGAACTGCGAGAGGAGCAGGACCAGGATTTAGAGCGGGAGCAAAACGAGAAGCGTCCCACAACAGATGACGTGAGTCCTATGGAGCAAGATGAGGAGCAGACAAATCACCCCACTGCTGAACcggagcaacagcagaagcagcagccgaggGAGAATATTGAGCCAGAGCAGGAGCGGGCAATGCCACTCATCACGTCCAATCAGCAGGCCGAACCGGAGCTAGACGAAGATGAGGACGAAGATCAAGAACAGGAGCAGGATCTGGAGCAGGAGGAGGCTGAGAACGAGCACGATCACGATCACGATCGAGACAATGATCACGATCACGAACACGATccggacgaggacgaggacgagcaGGACATCGAAGAGCTTATACACACGACCAACGAACTGCGCAGGCaagcagctgtggctgctgcaaatGCCGCAGCAATGTCACCGTGCCCCAGCGACGGGCCCGAGGATCTGTGCACCACCAAGAAGGACAAGGACACCAGCAACTGCCATTCCTCTGATAATGaaagcagcaccaacaacaacaacaacagcagcaagctgCAGGACAACAATCAACGCATTATGTTATCCTTAAAGGATATCAGGCAGCTCAATGCCAAGCCCAGCGCCAGCTCCACGCCCAGCCACACGCCCAACAGCTGTACGCCCGGCAACAATGGACTGTTGCCCTTTCCGCCCCCAGGCCTGCGGCCACCCGGTCTGCCCGATAGTCCGCCCTGCCACATGGAGGCACTGGAGGCACAAATgcatgcggcagctgctgccgccgttgcgGCTGCAGGCGCTGCCGGCGAGAATCCGTTCCACCACATGGAGCATCAGATGGAAATGTCCCTGGCCgcggcggctgcagcagcagccatgcATCAGCGCGAGTCACGTGATCCGCGCGAGAGCCGCGAACAGGCGCTGCAGCGCGAGCACAATGCGTTTGCCAGCAATCTGTTGGGGCCGATGGGACTGCCGCCCTTTGGTTCGCACAATGGGGTAACGGGGCCGGGCTGCGGAGGTCAAGCACCGCACGAACGGCTCGAGGAGAGCATGAATCGGCTGAGCAAGGAGTTTGGCAAGGAGTTCGGCAAGGAGTTCGGCAAAGAGTTTGGCAAAGACTTTGGCAAGGACTTTTGCAAAGAGTTTGCGCCCACCTCTCCGATGAGCCTGCCCGGCCACTATAATCCGCAGGATGGACAGCCGCATCCGCCATCGCCGCTGCCCTTTCCCGGCATGTCCTCGGCGTTGACGCTAACGCCGCCGCACATGTTTGGCCTGGACTCACCGCTCGGCCTGTTTCCGCCCGGCATTGATCCTGGCAAGCTCTACAACCCGCTAATGGAAATGAGTGATCCACGCGATATGCCCGGCGGTCCGCCGCCGTTTCTCAAAAAGAAAATGCCACGCCCTAAGGGACAGCATTCAGCGCCACGCGGCGGGCCGCCACGTTCCTGGACCAACACAGAGCTAACGGAGGCACTGCAGCACGTGTGGAACAAGAAGATGACCACGTCACAGGCATCGCGCATCTTTGGCATACCCTACAACTCGCTGCTGATGTATGTGAGAGGCAAGTACGGCAAGAGCTTGAAGCTGGAACAGCTGCGCAAGGACTGCATTAGTGGGCCGCCCATTGAGATGCTGCAGATGGGCATCAGCGGCGGTGGAGGCGGCGGCTCCAAGAGCGAGAAAAAGGAGCGcaaggacaaggacaaggaGAAGAACGCCCATGGCAATtcgagcagcaacaatagcaatgccaatggcagTGGCAATGGAAGTGGCTCCAGTGGTGGTCCACCACCCATGCCACATCCTAGTGACCTGGGTGGCCTGGGTCCGCTCGACTTGGAGCTGGGCCTGCCGCTGGGTCCGCCCGCTGGTCCACGCAGCGGCAGCTCGGAGCCAGATCTGCTGGGCGGCCCCAATGCTCTGTTCAATCCGTTCAATCCGCAAGGCTTCTATCCGGACTTTGCCGGCGGCTTCCCCGGCCTTCCGCTCAGCATGCTCAATCTGCTGCCGCCAGCGGAGCGACATCATGCAGCGGTGGCCATGCACAACCTGGGCGTTAGCATGGACGAGGACTGCAAGTCGGTGGGCTCCAAGCAATCCTCCTCGCTGGACGATGACTTCGCCATGGCTGCGGCCGCCGCTGCAATGGAGCAGCGACGACATGGCGAAGCGACACTGGCGCAGGCGAATGGGGCGGCGCAGGATTGA
- Protein Sequence
- MLKDAEELIKRCKLTSLPLALHMNEYGRQVAPAPLAALPLLAKPTNTPPVGGGVTSGAGAGSGASAISDHHHLHTHHQLPLPVSLALPMPVTSTHSHAHASMHTTPPTTPPTPPALPLNMSQTASAAAATAVAATPTTTHSPPATPTAVSAALAATQDHYSLRWNNHQNHILRAFDALLQTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQQRLQTLIQAGESLQVRGLVESSVPEHTPTPAASPDDFNLLDASLLSSSYEDESPSMVRPSSGKLIMPSRLFGSPASTMAALSMRRKREQECEREPESDQELGGSSPMPRRKQARPRRRSGDVPHDFALNKPETSESALQTVIKHELREEQDQDLEREQNEKRPTTDDVSPMEQDEEQTNHPTAEPEQQQKQQPRENIEPEQERAMPLITSNQQAEPELDEDEDEDQEQEQDLEQEEAENEHDHDHDRDNDHDHEHDPDEDEDEQDIEELIHTTNELRRQAAVAAANAAAMSPCPSDGPEDLCTTKKDKDTSNCHSSDNESSTNNNNNSSKLQDNNQRIMLSLKDIRQLNAKPSASSTPSHTPNSCTPGNNGLLPFPPPGLRPPGLPDSPPCHMEALEAQMHAAAAAAVAAAGAAGENPFHHMEHQMEMSLAAAAAAAAMHQRESRDPRESREQALQREHNAFASNLLGPMGLPPFGSHNGVTGPGCGGQAPHERLEESMNRLSKEFGKEFGKEFGKEFGKDFGKDFCKEFAPTSPMSLPGHYNPQDGQPHPPSPLPFPGMSSALTLTPPHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRDMPGGPPPFLKKKMPRPKGQHSAPRGGPPRSWTNTELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPIEMLQMGISGGGGGGSKSEKKERKDKDKEKNAHGNSSSNNSNANGSGNGSGSSGGPPPMPHPSDLGGLGPLDLELGLPLGPPAGPRSGSSEPDLLGGPNALFNPFNPQGFYPDFAGGFPGLPLSMLNLLPPAERHHAAVAMHNLGVSMDEDCKSVGSKQSSSLDDDFAMAAAAAAMEQRRHGEATLAQANGAAQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00534666;
- 90% Identity
- iTF_00520006;
- 80% Identity
- iTF_00502611;