Ddiv009446.1
Basic Information
- Insect
- Drosophila dives
- Gene Symbol
- -
- Assembly
- GCA_035042365.1
- Location
- JAWNLJ010000415.1:68655-75546[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 2.1e-05 0.0015 18.9 2.1 1 23 250 272 250 272 0.97 2 15 6.8e-06 0.00048 20.4 0.4 1 23 278 300 278 300 0.97 3 15 0.001 0.071 13.6 0.9 1 23 306 328 306 328 0.95 4 15 1.4e-05 0.001 19.4 3.1 1 23 334 356 334 356 0.97 5 15 3.3e-05 0.0023 18.3 4.7 1 23 362 384 362 384 0.99 6 15 6e-05 0.0042 17.4 5.7 1 23 390 412 390 412 0.97 7 15 2.9e-07 2.1e-05 24.7 4.3 1 23 418 440 418 440 0.98 8 15 1e-07 7.4e-06 26.1 2.4 1 23 446 468 446 468 0.97 9 15 6.1e-05 0.0043 17.4 6.7 1 23 475 497 475 497 0.97 10 15 0.00011 0.0075 16.6 6.5 1 23 503 525 503 525 0.98 11 15 6.3e-07 4.4e-05 23.7 7.7 1 23 531 553 531 553 0.98 12 15 0.0002 0.014 15.8 9.5 1 23 559 582 559 582 0.95 13 15 6.9e-05 0.0049 17.2 0.9 1 23 588 610 588 610 0.98 14 15 0.00076 0.054 14.0 3.4 1 23 620 642 620 642 0.97 15 15 8.7e-06 0.00061 20.1 1.6 1 23 648 671 648 671 0.96
Sequence Information
- Coding Sequence
- ATGCAGCACGTGAGCGCTGCCAGTTCGGCACCTTCGGTGGTTTCAGCACCGGTGGTGACCACTGGCGGTGGCACCACCATCACCTTGGGCGGAGCCCCGTCATTGTCCGGTGTCAAATCGACGGAAGCATCACATAAAGAGGACAGCGGCAAGCAGCCGCCACACGGCATTGAAATGTATAAAGTGAACATTGAGGATATATCACAGTTATTTACTTATCACGAGGTCTTTGGCAAAATCCACGGCGATGTGGTTAATCATGTGGCGGCGGTGCATGGCAGTCAATTGCCACCGCCCCAACTGCCACCGCCGCCCCCCCTACCGCCACAGACGACGCATTCGGCAagcgcagctgcagcagcagcggcggcgtcCACAAATAATGCAGCCGTTGCTGCTGTAATGGCCTCGGCTAATGCAGCAGCCGCGGCTGCAGCGGCCGCATCAGCAGCGGCAtcagcacaacagcaacaacagcaacaacaacagcaacaacagcagcaacaacagcaacaacagcagcaacaacaacagccagcgACAAGCACAAATGCTGGAAGCCAGCAGGGCAGCGCCACGGTGACAACGACCAGCTCGGGCAGCAACGGGGGTGGGAATGGGGGCAACAACTCGACGACAACGACGGGTGAGTTGCTAATGCCGAAAATGGAGGGAGGCATCCATGGCGTTGATGGTCAGTCGAGCGTTGCGTTGGCGCCGGATGGCACGCCCATTGCGACTGGTACGCATGTGTGCGATATTTGTGGCAAGATGTTCCAGTTTCGCTATCAGCTGATTGTGCACCGCCGCTACCACAGCGAGCGTAAGCCGTTCATGTGTCAGGTGTGCGGGCAGGGTTTTACCACATCGCAGGATTTGACCCGTCATGGCAAGATCCATATTGGCGGTCCCATGTTCACGTGCATTGTGTGCTTCAATGTGTTTGCCAATAATACGAGTCTGGAGCGCCATATGAAACGGCATTCAACGGACAAGCCATTCGCCTGCACCATTTGCCAAAAGACTTTCGCACGCAAAGAGCATCTGGACAATCATTTTCGTTCGCATACGGGCGAAACGCCGTTCCGTTGCCAGTACTGCGCCAAGACGTTTACGCGCAAGGAGCACATGGTCAATCATGTGCGCAAACACACGGGTGAGACGCCACATCGTTGCGATATTTGTAAGAAGTCTTTCACGCGCAAGGAACACTATGTTAACCACTACATGTGGCACACTGgtCAAACACCGCATCAGTGCGATGTCTGCGGCAAGAAATACACGCGCAAGGAGCACCTAGCCAACCATATGCGCTCCCACACCAACGAGACGCCTTTCCGTTGCGAAATCTGCGGCAAGAGCTTTAGTCGCAAGGAGCACTTCACCAATCACATACTCTGGCATACAGCAGGTGAGACGCCGCATCGGTGCGACTTCTGCTCCAAGACGTTTACGCGCAAGGAGCACTTGTTAAATCACGTGCGCCAGCACACGGGAGAGTCACCGCATCGCTGCTCCTACTGCATGAAGACGTTCACGCGCAAGGAGCATCTGGTGAATCATATACGCCAGCACACGGGGGACTCGCCGCACAAGTGCGAGTACTGTCAGAAGACGTTCACACGCAAGGAGCATCTCAATAATCATATGCGCCAGCACTCCAGCGACAATCCCCATTGTTGCAACGTCTGCAACAAGCCCTTCACACGCAAGGAGCATCTGATCAATCATATGTCCCGCTGCCACACCGGCGATCGTCCCTTTACCTGCGAGACGTGCGGCAAATCCTTCCCACTCAAGGGCAATCTGCTGTTCCATCAGCGCAGCCACACCAAGGGGCAGGAGTGCGAGCGTCCATTCGCCTGCGAGAAGTGTCCCAAGAATTTCATATGCAAAGGTCACTTGGTATCGCACATGCGCTCCCATTCGGGCGAGAAACCGCACGCGTGCACACTGTGCAGCAAGGCGTTCGTCGAGCGCGGCAATTTGAAGCGCCACATGAAGATGAATCACCCGGATGCTATGATGCCGCCACCACCCGTGCATCCGCATCCACAAATACCGGCTGGTGTGCTGACCCAAGTCAAGCAGGAAGTGAAACCGATCATAATTCCCCATCActcggcgacgacgacgatgcaCACCATACAGCAGATAACAGCAGGCGCCGCAGCAGCGGGCGCCGGAGCCGTCCAGTTAGCGCCAGGCCTGGTGCCGCTGGTCACCAGCTCGCTCATCTCGCACAATGCGCAGCAGtcgcagaagcagcagcaggcggctgcagcagttgccgcccaacagcaggcggcagcagcagctgcggcacAGCAACAGGCGGCCGCTGCGGCAGCAGCTCAGCAGcaggcggcggcagcagcagcgcaccaacagcatcagcaacaggtggccgctcagcagcagcaacaacagcagcagcagcaggctgcCGTCGCTgctcatcagcagcagcaacagcagcttcagcagcaacagttgctccaATTGTCCATACAGCAGGCggcccatcatcatcagcagcaccagcaacagcagcagcaacaacagcagcagcagcaacatcatcaacagcagcaacagtcgcatcCGCAGGCAccgccgcaacagcagcagcagcaacagcagccgccgtCACAGGTGCCTATAGCATTGATAAGTGATCCAGGTGCGCTGGCACGTGCCGccatgcagctgcaacatcTGCCAACAAATGTGGAACAGCATCCAGTGGTTTACTAA
- Protein Sequence
- MQHVSAASSAPSVVSAPVVTTGGGTTITLGGAPSLSGVKSTEASHKEDSGKQPPHGIEMYKVNIEDISQLFTYHEVFGKIHGDVVNHVAAVHGSQLPPPQLPPPPPLPPQTTHSASAAAAAAAASTNNAAVAAVMASANAAAAAAAAASAAASAQQQQQQQQQQQQQQQQQQQQQQQQPATSTNAGSQQGSATVTTTSSGSNGGGNGGNNSTTTTGELLMPKMEGGIHGVDGQSSVALAPDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTAGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQECERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAMMPPPPVHPHPQIPAGVLTQVKQEVKPIIIPHHSATTTMHTIQQITAGAAAAGAGAVQLAPGLVPLVTSSLISHNAQQSQKQQQAAAAVAAQQQAAAAAAAQQQAAAAAAAQQQAAAAAAHQQHQQQVAAQQQQQQQQQQAAVAAHQQQQQQLQQQQLLQLSIQQAAHHHQQHQQQQQQQQQQQQHHQQQQQSHPQAPPQQQQQQQQPPSQVPIALISDPGALARAAMQLQHLPTNVEQHPVVY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00560429;
- 90% Identity
- iTF_00560429;
- 80% Identity
- -