Ddiv006260.1
Basic Information
- Insect
- Drosophila dives
- Gene Symbol
- -
- Assembly
- GCA_035042365.1
- Location
- JAWNLJ010000326.1:5884884-5886518[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.9e-16 6.2e-13 48.2 0.0 2 45 375 418 374 418 0.95 2 3 0.023 37 4.1 0.0 27 37 447 457 438 462 0.91 3 3 2.6e-20 4.2e-17 61.6 0.0 2 42 484 524 483 526 0.96
Sequence Information
- Coding Sequence
- ATGGGCCACTCGTCCACAATAATGGATATCCAGCGCGTTTTGCTCCACCAGCAAAGCAACAATCAAAGCTGCGAGGTCCTGCTGGTGGCCAAAGATGGCATCAGCGTGCGTGCCCATCTTTTTGTGCTGAGCACGTGCAGCGATCTGATGCGCAATATCCTCGTCGATTTGCCCACTGGCCAGGAGGCAACGGTCATCTTGCCCGACATACGCGGCGAGCTGCTGGAGAGCATGTTGTCTTTCATTTATATGGGTGAAACGAGTTTGCCCTCTGCCATGCTCTCCGAATTCCTTGAAGCCATCAATCTGCTGGGCATCAAGTCTGCTATTAGTTTTGAAACGAATCCAATAGCCATGACCAGCACAAATGTCATCAGCAGCGCTATGGCCGTCGAAGCAGCAAAGTCAATTAGTGGactacaaattgaaaatgcatcGCTTGTCGAGGTGGAGGAGGAAGAAGATGCTAGCGCAGTGGTTGGCAAACTTCAGATGGATAACACAGTACTGGCTAATCcacagcaccaacagcaacagcaacaacatcacgATCAGCAGCAAGGACGAACATTGGAGTTTCTTGATATGTACAGCGATCAGCCCAAAATAACGTATTCCATTGAGCATATGGGCGGCACTAGCAGTGGCAATCAGTTTATATTAACGGAGAACACGGGCACCTTTACCATTACGCAATCGACATCTTCCGTAAATAAATTAGGCGAATCAGTTAATTCCGTAATGGATACAGCGACGCACAGCAGCGAACTGGTTGACGAAGAAGTTGAGGCGGATGTCACCGATGACCACGACGAATCCGAATCTCAGTTAATTGAGGAGGAGTACGGGACATCCGCCGATCGCTTAATAGAGATCagtgcagatgcagatgccgatgccgatatGGCCGAGGATGTGATGCATGAAGTGGGTGGCTGCGACGAGGAGGAAGATGATGAAGAACTGCTGGATGTGAAGCCACGCAAATCCCACCTAgacataaaaatgttaaaaactaAGATACGGCAGCGCGCCACGCCAACAAAGTCTTCGGCCAAAAAATCGATAACgaaacagcatcaacagcatgTGGCACTGAAAAGGGAGCTGAAGGACGATATCAACGATGCTCTTGATCTGGCCGCAGACGCTGTCCTCCACGAGGGACTGAGTCTGCAGAAGGCTGCTGATCGTTTTGACATATCGAAAACCGTATTATGGCGACGGGTGCGCTCCAATCCGGCGTACATGCGAATTAAGCGGGAGAAGCCTTCGCTTTCGGAGGCCTACGAGCGTCTGAAGAATGGCCACTCTCTAAAGAGCATCAGCCAGGATCTGAACATACCCATGTCAACGTTGCACAGGCACAAGGTACGCCTGGCAGCCCAAGGACGCCTGCCCGCCTTCGTCGCCTGTCGGCGGCGAGACAGCACTCCCAAGGATGAACTGCGAGACAAGCTGGCGAAGGCGTTGCATGCTTGCATCAGCGGTGGTATGTCTCAGAACCACGCCGCAAATCTCTTCGAAATACCCAAAAGCACACTCTGGCGACATTTACAGCGTCGTGTCACCGAAGCGGAACGGAAAGTCAAGGAAGAACAGGAGGAGGACGACGAGGAGGATGGTCTAAACTAA
- Protein Sequence
- MGHSSTIMDIQRVLLHQQSNNQSCEVLLVAKDGISVRAHLFVLSTCSDLMRNILVDLPTGQEATVILPDIRGELLESMLSFIYMGETSLPSAMLSEFLEAINLLGIKSAISFETNPIAMTSTNVISSAMAVEAAKSISGLQIENASLVEVEEEEDASAVVGKLQMDNTVLANPQHQQQQQQHHDQQQGRTLEFLDMYSDQPKITYSIEHMGGTSSGNQFILTENTGTFTITQSTSSVNKLGESVNSVMDTATHSSELVDEEVEADVTDDHDESESQLIEEEYGTSADRLIEISADADADADMAEDVMHEVGGCDEEEDDEELLDVKPRKSHLDIKMLKTKIRQRATPTKSSAKKSITKQHQQHVALKRELKDDINDALDLAADAVLHEGLSLQKAADRFDISKTVLWRRVRSNPAYMRIKREKPSLSEAYERLKNGHSLKSISQDLNIPMSTLHRHKVRLAAQGRLPAFVACRRRDSTPKDELRDKLAKALHACISGGMSQNHAANLFEIPKSTLWRHLQRRVTEAERKVKEEQEEDDEEDGLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00516912;
- 90% Identity
- iTF_00516912;
- 80% Identity
- iTF_00500426;