Dcra008645.1
Basic Information
- Insect
- Drosophila cracens
- Gene Symbol
- hang
- Assembly
- GCA_035042505.1
- Location
- JAWNLF010000633.1:2812331-2829719[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.38 26 5.5 1.0 3 23 513 534 512 534 0.93 2 18 0.63 43 4.9 3.6 3 22 641 660 639 660 0.89 3 18 0.00082 0.055 13.9 3.3 1 22 777 798 777 800 0.90 4 18 0.094 6.3 7.5 0.1 2 21 812 831 811 832 0.93 5 18 0.00095 0.064 13.7 0.2 2 23 964 986 963 986 0.95 6 18 0.0035 0.24 11.9 0.2 1 23 994 1017 994 1017 0.96 7 18 0.00042 0.028 14.8 0.5 2 23 1104 1125 1103 1125 0.97 8 18 0.00039 0.026 14.9 2.9 2 23 1257 1279 1256 1279 0.97 9 18 0.031 2.1 9.0 0.2 2 23 1288 1310 1287 1310 0.95 10 18 0.0018 0.12 12.8 0.3 1 23 1323 1346 1323 1346 0.97 11 18 0.00017 0.011 16.1 1.1 1 23 1405 1427 1405 1427 0.99 12 18 0.0026 0.18 12.3 0.9 1 23 1435 1458 1435 1458 0.96 13 18 0.092 6.2 7.5 0.4 2 19 1466 1483 1466 1484 0.94 14 18 3.6e-05 0.0024 18.2 0.4 3 23 1579 1599 1578 1599 0.98 15 18 0.00057 0.038 14.4 0.1 1 23 1634 1656 1634 1656 0.97 16 18 0.00081 0.054 14.0 0.6 2 23 1747 1769 1746 1769 0.93 17 18 0.0087 0.59 10.7 0.3 3 23 1825 1845 1825 1845 0.98 18 18 9.2e-05 0.0062 16.9 2.1 1 23 2326 2348 2326 2348 0.99
Sequence Information
- Coding Sequence
- ATGTGCGACGctgccgcaacaacaacaacaacagcagcagcaataacaacaactgcagcagcagcacaaggaACAGGTGCAGCTGGCGATAATGCGATGGAAGAACAAAATCAGCGAGAGCGACAAAGCTGCTGTCGCCTGTGCATTGCGCCCGCCAGCGAATGCATTTCGATCATCAACAGTTATGCGGCCGATAAGGAGCCGTTGGCcactaaaatacaaaactgcGTAAATATCAAGATCACATCGGTGGATCGTCTATCGTTGCACATTTGCCATGCCTGCATCAGTTATTTGAACTCGTGGCAGAGCTTCAAGAATCGCTGTTTCAGCTCACAGTCGAAGCAGCGCCAGTGGCTGGAGAGCGACAAAACCAAACAGCAGACGCTACTCGGATACTTGGATTTGAACAGGGCCGAGAATGGCAACACCATtgaaccacaacaacaacaacaacagcagcagcacgaatTGAAAATGGATTCAGCGACGACGGCAGCTGAAAAGGTGTCCGCTGCCAACATTTTGGATGGCATACCTCAGCTGAAGAAACGCAAATCGTTAACAGTCTATGTGAGtccaaagcaacagcagcaagcacagcaacaacagtcgcagcaacatacgcagcaacagcatgcaACAGGGGCAAGATCAACAACGAAAACgtcgacggcggcggcggcggtggcggagTCGCAACCAACATTGCAAACCCTTTTATTGCAGGtgcccacagcagcagcagcagcattggcaaCGGCGtcaacacagcaacagcagcgcaagcatcagcagcagcaacaccatcagcagcagcaacgtggCAAGCAGCCGCAACATCAGTactatcaacagcagcagcagcagcatcgacaGAGTCGCGTTCGTCAACCGCGGCGACAGCAACAAGCGGCAACGGCCAAATTCAGAAGCAAATTGTTTATGCCACTGGATATATCGGTGCCAGCGCTGCCAGCGCTGTTGCCACCGCCGACGccagctgttgctgatgtaACGTCGTTGCTATTGCCGTTGTCGCTGCCACTTGATTTTAGCCAAAATCCGAATCTGAATCCAAATCCCAATCAgtatccaaatccaaatccaaatcaaaacTTAAATCAGAGATATACAAGTAGCCTTTTAGTGCCGCCCCCGCTGCCGCTGTCCGTGCCAGTTGCAACAATGAGCAGCAACGAGGCTGCCATTGCCACTGGCTGtggtgcaactgcaactgcaaccgcaGTCACGACTCCATTGCTCATGCCGTCGGTGCCTGCCGTGCCCATCAAGGATGAGCCCCTGTACGACACGGATGATGACTTTCAAATGAGGTCCATAGACGAATCCGATGATATGATGGATCCCACAATGTTCCTAGAGCGCTCCGAGCACGAAGGCGATGTGCCACTAAAtACCTCTGACTATGATTATACGGCTCAGCATGGCGTGACCGCGGCTGTGGCGGCGGCATCGCTACCCGCCAGCGCTGTGGCAAATGTGGCAGCCGCTGGGGACTCGAAGGTGGCCAGCTGCCGGGCGTGCAGTCTGCAGTTCTCGACACGGGCCAACGCTCGTCGCCACGAGCGCAATCTGCATCCGAATCTGTTTCAATTGTCGACAGACTCACCAAATAATACGCCGATCACAAAACCAACGCCGGCCCTCGCCGCCGCATTGGAGATACAGCgcgcagcagcggcggcaaccGCAACCGCTGAGGCAACCCGTGCCGCTGCAGGTGGCAATATATCGGCCCAAAAATATCGACAGGTGGTGATGAACACGTTCACCAAATGCGAGAACGGCGGCTTCGACTACGACAATCCCGAACAGTATCAGCAGCTGTTGTCGCATGACAAGGTCGACTTCATCCAGAAGAACACCGAATTTCTCGAACAGTACCAGACGATGACGTGCCGCTGTTGCAACAAGTTCTTCAACACGTACAAGAACTTTATGGCGCACGTGCGCAAAAAGTATCCGTCGCTGCCGCGCAACCTATGCTTCAACTGCCTCAAGATGAACGACTCGAAGGCGCTGTTCATATCGCATCTGAAGAAGCGCAACTGCATCAATTTGTATCGTGTGCTCAACGCACTGCGCACCAAACAGCCAAACTTTGTCCATGCCAATGCCGCCTCATCCACTGCCACCACATCAACGACAGCTGCGGCGACTGCTCtaaaccagcagcagcaacagatggTGACAGCAAacgaaacagcagcagaaacaacaacagcgacaccaacaacaccatcaACACCATCAACGGATCGTACGGAGAAGTTGCGTGCCAAGGATCTGCTGGTTAACAAGCTGTACGAGTGCAAGCTGTGCCCAAAGGGTTTCCGCACAAAGCACGAGTTCCGCACCCATGTCTACGATAAGCATGCGGATGTGCAACGCAAAGATAATAATTCGATACAGTGCAGCTTCTGTGGCCTGGACTTTGCCGATCCGGTGGATCGTCGAAGGCATTACAATAACATGGATTGCATTGTGCGGCTGCGCTGCATGACCTGCGATGCCAAACTGGAGACGCATCAGCGCTTCCTCGAACATGTCTATCAGGATCATTTGGGTGGCGTGAGCAGTGATAATGCCTCCCAGCGCAGTTTGCTCGGCTCCCTTGGCATTGGCGTCGTCAGTCAGTCACCCAACGACGAGtcgcgcagcagcaacagcaacaataaccacaacaataacaacaataataatactaataacaacaacaacaacaatccatCTGTAACCCCGACACCCAAACTACCAACGGTAGCgggtgcagcaacaacatctgGAGGAGAAGGAGGGGGATCAGCAACATCATCGGGGGGTCGTGATGCACCCAAGTCGCAGTATTTCTCACGCATGCCACAGGTCTGTCCGATCTGTGGCCAGCAGTACAATAACTATAACAATGTGTTGCGCCACATGGAATCGAAGCATCCCAACAAATTGCCCGAGACATACAAGTGTGTCCGTTGTGGACTGGGCTATCCGCGCATCTCCTATCTGCGGGAGCACATGACCAATGTGCATGGCGTGGACAAGAATCGGCAGACAGGCGGATTTGAGTATATTGTGAATGCCGATGCAGTTAAATTGGCGGATGGCAGCACGCCCAATGTCTATACGGGACGATATGATTATGTGATGAAGGATCTAATGTCTATTACAAATGGTGGGACACTcgatgatgatgacgaagaTGGCGACAGCGTCGGCCCCATTGCCAAAAAGATGCGACTTAATGATAGCAGCGGCCTCAATATGAGCAGCGTTGCCAACCTGCAGAAGAAGTGCCTCCTCTGCAATGCGGTGTTCAGCAACAATATTGGTCTATCGAATCATATGCGTTCCCATTACACACCAATGATAACGCCAAGTGCTGCTCTGGCGGCTGCCAATCGCATGACGCCCAAATCgctaacaataacagcaacgcCACCGCTCGAGGTGACAGCCACGGCGACGTCGGCGTCAGCAACATCATCGGGCACAACAAATACATCaactgcggctgcggctgctgatgcaacaaagacaacaactgTGGCTGGAGTTAAAGCAGTGGCAGCATTTGCTTCCTCCTCATCGGGAGCAGCCgcctcaacagcaacaggcacaggaacagcatcaacatcagcatcatcatctgGCAACTTGCCGCCAGCAATGGCGCATCAGACGGCCCAGGAGCAAGCGGTATTCCGTCGCAGTCTGGACCAGGCGGCCGATCGACGATTCCGTCGAATGCGCTGTCGTATCTGCCAGCGGAGATTCAGTTCGAAGAAGTCGTATCGCTACCACATGCTCACCGACCATCAGGTGCAGAATGTGCAGTTCATCAAGTGCAAGCTGTGCAACGCGGAGTTCGCCTACGAGAAGGGACTGAAGGTGCATCTGTTCAAGGTGCACGGCCGGGCCATCAAGGATGAGATGATTATCAAGCAGTTCGAGTGCGATGTCTGCTCCACTGTTTACAGCTCCGAGCTGGaattgcagcagcacaagcgCAGCGTACACAAGTCACAAGCCACCACCgattcatcatcatcatcggcagcagcagccggtgGCAAACAATCATCAAACAAGTcagcgactgcaactgctACCTCCACAGCGGCGGAACTGGCGGCAGACACATCATCCCCGTCGGGCGCGGCAGGGGCGGCCACTCAGCTGCCACTCTACTGGTACCAGTGCAAATATTGTCCATCCAACTTCAACACCAACAAGAAACTGGCCATCCACATCAACTCGCACGACGAGTTCGACTCGAATGATTACTCGTGCAAGGACTGCGGCAATGTCTACAGCGGCCGCAAGAGCCTCTGGgTGCATCGCTACAAGAAGCATCCGCAGGTGCCGGATCCCGCCGAGTGCACGCTGTGCCGCAAGATGTTCTTCGATCGCCAGATGCTGGAGAATCATACGCCCACCTGCAATCGCAAGCCAATCACTGCCACTGGCGCCCATCAGCAggatcagcaacagcagcagcaacaacaacagcaggtgcagcagcaatatcatCAGCGAGCCATCTTCAAGCACAAAACGggagatgatgatgacgaggatgaggacgatgaTCAGTTGCAGCTAATGGACGATGGCGGTGGCGGCAGCAATGATAGCAATGCTGGCAATGCTATTGcaaaagctgcagcagcagcgctgagCGGCCCAATAAAGATACGCATTCCGGAGGTGGCATGCACCATTTGCGGTGCCCGGTTCACCGATCAGGAGATGTTTACCAAGCACATACAGAAGCACGAACAGGAACTGTATGTGGACAATCCGTTGGCGGCCATGTTCGATGATGGGCCAGCGGATGCCGGACAATTTCAGATTGAGCACCAGAACGAGAATGGTGAATACGCGTGCGATTTGTGCAACAAGACGTTCCCCCAGGTGATTGCGCTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGATCCCACTCAACGACGGCGAAGCGACAAcgctgaacaacaacagcaacaacagcagcagcagcaacaacaacaacaacaacaattcgctGAGCTCATCATCGATGCTGCATCTACGCGAACTGCATGCAGTGGGTCTGATGcccaatcagcagcaacaccagaaacagcaacaacagcagcaggaacaacaacaacagcagcagcagcaacaacgaacgAGCAAATCAATGAAACGGAAACGTGAACTGAAATGCGAATACTGCGCCTCCACATtcattagcaacaacaacctgcgACGCCACATGTACGAGCTGCACAAGCACGAGGTGAGCAATCTGCCCGAGCCGCCCGTGATTGAGGTGGATGAGCCGTTGACGTGTCGCCGCTGCGGCGATCTGAAGTTTGAGACCAAAGAGCAATGGATCGAGCATAAGCTGGCCGATGCGAGGGTGGTGCGTCCATTCTGTCCATTCCAATGGGGCTGTGATCTGTGCGGCGAATATTTGTCGCGCAAGGAGAAGCTCATCAATCACATTAACAATCATCTCAAGGAGGATGTGATTGTGCCGGTTGCCACCaagccaacagcaacgacacccaacaatgttgcaacgggagcagcagcaaccgttTTAGCTGCCACATCAGCAGAAGGTGCAGtagcagaaggagcagcagagGCGGCGAAAGTAAaaacgccaacagcagcaaaggaACTTAAGTCTAAACAGCAGTCGGACAATGTGAAGCGAACGATACAGCTGGATGGTGGGAAGCTAgcgaagcaacagcagcaagaggaggaggaagaggatgATAGTGATATGGATGATGATAGCGATAGTGGcaatgatgatgaggagggcAGCACTAGTgctgacgacgatgatgaggacgacgatgatgatgaggagggcgacgtcgacgacgatgatgaagatgatgaggAGGGCGACGTCGAAGATGGTgagaaaaatgttattaaactGAAAATGCTGCAACTATTGCCGGAAAATACAAacaacgacgtcgacgacgatgatgacgatgatgaagatgatgaggAGGGCGACGTCGAAGATGgtgaaaaaaatgttattaaactGAAAATGCTGCAACAACTACCGGAAAatacaaacaccaacaacgacgtcgacgacgatgatgaagacgatgaagatgatgagGAGGACGACGTCGACGATGATGACAAACATGTTATTAAACTGAAagtgctgcaacaacagccggaaaatacaaacaccaacaacgacaacaacaacagcgctaTTCTTAATGACAACGATATCATTGAGTTGGAAATCTTGTCGGAATCCAATgccgacgacgatgatgaggaagatgacgatgatgacgatgacgacgacgatgatgatgatgataatgataatgatgacgatgatgatgatggcgaagacgatgacgatggcgatatcgatgacgatgacgatgataatACAACGGTTGAGCAACATCAGCCGAGGGCCCTCAATTTCGACTATTCGTGCACCGACAGCGCCAAGCTAAATGGCAACGGTGGCGAAAAGTCTGTGGCGAAATCAAagacacagccacagccaatgATGGtcatgcacagcagcagcaggagaagtCGCCGCGGGGATGATGGCGAGGAGGAAGTGGATGATAtggatgatgaggatgatgatgatgttgtgggTGAAGCGATGTCCATTGATGATATTATTGTGGAGGATGATGGTGTGGATGATGACGAAGTGGTTGGTGTcggtggtggtgttgttgaggatgatgatgaagatgatgaagaggatgacgatgatggcgatgatgaGGATGTTGCTACATCATCATCTGAGAGCgagtcgacaacaacaacatcgtaTTCAACTGGTGAGCGgcgtaataaaaaaaataaaaataaaaaaaaagtagttgCATCAGCGGCACATGGCGCTGCCGCTGATCAGTCTAATTCCATCTATACGTGTGATCTATGTCAACTTTGTTTCGATTCCCAGGAGCTACTTCAGACACACATTAAAAGTCATTTCCTCAATGGGCCATCGGcggggagcagcagcaacagtaacaagaGCAATGGCGCCAGCAGGAgcaccaataacaacagcaacaacaacaacaacattagtagtagtagtagcagcagcagcagcagcaacagcaataacaaaatcaatacCAAAAAGTCCGGCTTGGATGCAACGacgaagacaacaacagcaacaacagttaaaGATGCAGCGACGGACGCTGCAACGGGCTTCAACTGA
- Protein Sequence
- MCDAAATTTTTAAAITTTAAAAQGTGAAGDNAMEEQNQRERQSCCRLCIAPASECISIINSYAADKEPLATKIQNCVNIKITSVDRLSLHICHACISYLNSWQSFKNRCFSSQSKQRQWLESDKTKQQTLLGYLDLNRAENGNTIEPQQQQQQQQHELKMDSATTAAEKVSAANILDGIPQLKKRKSLTVYVSPKQQQQAQQQQSQQHTQQQHATGARSTTKTSTAAAAVAESQPTLQTLLLQVPTAAAAALATASTQQQQRKHQQQQHHQQQQRGKQPQHQYYQQQQQQHRQSRVRQPRRQQQAATAKFRSKLFMPLDISVPALPALLPPPTPAVADVTSLLLPLSLPLDFSQNPNLNPNPNQYPNPNPNQNLNQRYTSSLLVPPPLPLSVPVATMSSNEAAIATGCGATATATAVTTPLLMPSVPAVPIKDEPLYDTDDDFQMRSIDESDDMMDPTMFLERSEHEGDVPLNTSDYDYTAQHGVTAAVAAASLPASAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPITKPTPALAAALEIQRAAAAATATAEATRAAAGGNISAQKYRQVVMNTFTKCENGGFDYDNPEQYQQLLSHDKVDFIQKNTEFLEQYQTMTCRCCNKFFNTYKNFMAHVRKKYPSLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVLNALRTKQPNFVHANAASSTATTSTTAAATALNQQQQQMVTANETAAETTTATPTTPSTPSTDRTEKLRAKDLLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLEHVYQDHLGGVSSDNASQRSLLGSLGIGVVSQSPNDESRSSNSNNNHNNNNNNNTNNNNNNNPSVTPTPKLPTVAGAATTSGGEGGGSATSSGGRDAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMTNVHGVDKNRQTGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDDDEDGDSVGPIAKKMRLNDSSGLNMSSVANLQKKCLLCNAVFSNNIGLSNHMRSHYTPMITPSAALAAANRMTPKSLTITATPPLEVTATATSASATSSGTTNTSTAAAAADATKTTTVAGVKAVAAFASSSSGAAASTATGTGTASTSASSSGNLPPAMAHQTAQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIIKQFECDVCSTVYSSELELQQHKRSVHKSQATTDSSSSSAAAAGGKQSSNKSATATATSTAAELAADTSSPSGAAGAATQLPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECTLCRKMFFDRQMLENHTPTCNRKPITATGAHQQDQQQQQQQQQQVQQQYHQRAIFKHKTGDDDDEDEDDDQLQLMDDGGGGSNDSNAGNAIAKAAAAALSGPIKIRIPEVACTICGARFTDQEMFTKHIQKHEQELYVDNPLAAMFDDGPADAGQFQIEHQNENGEYACDLCNKTFPQVIALKVHRKWHFRGDSKQIPLNDGEATTLNNNSNNSSSSNNNNNNNSLSSSSMLHLRELHAVGLMPNQQQHQKQQQQQQEQQQQQQQQQRTSKSMKRKRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPVIEVDEPLTCRRCGDLKFETKEQWIEHKLADARVVRPFCPFQWGCDLCGEYLSRKEKLINHINNHLKEDVIVPVATKPTATTPNNVATGAAATVLAATSAEGAVAEGAAEAAKVKTPTAAKELKSKQQSDNVKRTIQLDGGKLAKQQQQEEEEEDDSDMDDDSDSGNDDEEGSTSADDDDEDDDDDEEGDVDDDDEDDEEGDVEDGEKNVIKLKMLQLLPENTNNDVDDDDDDDEDDEEGDVEDGEKNVIKLKMLQQLPENTNTNNDVDDDDEDDEDDEEDDVDDDDKHVIKLKVLQQQPENTNTNNDNNNSAILNDNDIIELEILSESNADDDDEEDDDDDDDDDDDDDDNDNDDDDDDGEDDDDGDIDDDDDDNTTVEQHQPRALNFDYSCTDSAKLNGNGGEKSVAKSKTQPQPMMVMHSSSRRSRRGDDGEEEVDDMDDEDDDDVVGEAMSIDDIIVEDDGVDDDEVVGVGGGVVEDDDEDDEEDDDDGDDEDVATSSSESESTTTTSYSTGERRNKKNKNKKKVVASAAHGAAADQSNSIYTCDLCQLCFDSQELLQTHIKSHFLNGPSAGSSSNSNKSNGASRSTNNNSNNNNNISSSSSSSSSSNSNNKINTKKSGLDATTKTTTATTVKDAATDAATGFN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00496779;
- 90% Identity
- iTF_00496779;
- 80% Identity
- -