Basic Information

Insect: Drosophila colorata
Gene Symbol: -
Assembly: GCA_035041545.1
Location: JAWNLD010000680.1:8574287-8578797[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00043 0.028 14.8 0.1 1 23 147 170 147 170 0.96

2 14 0.0015 0.097 13.1 2.9 2 23 219 241 215 241 0.89

3 14 0.013 0.83 10.2 0.9 1 23 342 365 342 365 0.93

4 14 1.7 1.1e+02 3.5 5.2 2 23 414 436 413 437 0.95

5 14 0.0049 0.32 11.5 0.4 1 23 493 516 493 516 0.88

6 14 2.1 1.3e+02 3.2 0.1 2 14 535 547 534 559 0.85

7 14 0.00072 0.046 14.1 3.3 2 23 567 589 567 589 0.96

8 14 0.00082 0.053 14.0 0.1 1 23 698 721 698 721 0.95

9 14 8.7e-05 0.0056 17.0 0.3 1 23 770 793 770 793 0.93

10 14 0.0012 0.078 13.4 2.2 2 23 843 865 842 865 0.97

11 14 0.0034 0.22 12.0 3.8 1 23 946 968 946 969 0.94

12 14 0.14 9.2 6.9 1.5 1 21 1021 1041 1021 1042 0.95

13 14 4.1 2.6e+02 2.3 0.1 2 23 1095 1119 1094 1119 0.75

14 14 9.1 5.9e+02 1.2 0.4 1 8 1137 1144 1137 1161 0.70

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00043	0.028	14.8	0.1	1	23	147	170	147	170	0.96
2	14	0.0015	0.097	13.1	2.9	2	23	219	241	215	241	0.89
3	14	0.013	0.83	10.2	0.9	1	23	342	365	342	365	0.93
4	14	1.7	1.1e+02	3.5	5.2	2	23	414	436	413	437	0.95
5	14	0.0049	0.32	11.5	0.4	1	23	493	516	493	516	0.88
6	14	2.1	1.3e+02	3.2	0.1	2	14	535	547	534	559	0.85
7	14	0.00072	0.046	14.1	3.3	2	23	567	589	567	589	0.96
8	14	0.00082	0.053	14.0	0.1	1	23	698	721	698	721	0.95
9	14	8.7e-05	0.0056	17.0	0.3	1	23	770	793	770	793	0.93
10	14	0.0012	0.078	13.4	2.2	2	23	843	865	842	865	0.97
11	14	0.0034	0.22	12.0	3.8	1	23	946	968	946	969	0.94
12	14	0.14	9.2	6.9	1.5	1	21	1021	1041	1021	1042	0.95
13	14	4.1	2.6e+02	2.3	0.1	2	23	1095	1119	1094	1119	0.75
14	14	9.1	5.9e+02	1.2	0.4	1	8	1137	1144	1137	1161	0.70

Sequence Information

Coding Sequence: ATGGAAGGTATGGACCTGTGGACGTCCATGTTTTCAGCCGACTTCGAGGAGGCCGACGACACTcacaacaatggcaacgaGTTCATGggcgaggaggaggacgaggaACGGGCGGATGAGGTCAGGCGAAAAGGACACGAGCCCGATGATGATGCCATATTCGATTTTGAACTGGAGCCAATTGTTAGCATCGCGGAACCAGCAGAACCGGAACCAGCGCCCCGACCAACGGCCCCATTGGCGCCACCAATGGCGACGTCTGGGGCACCAGCCATACGCCCCCCGCACCGCCAATCGCTGCCCGCATCCTTTGGCTCCACAATGCTGGTGGGTCGCGGTGCTGCTGTTGGAACAGCACCGGCCACACGGCCAACGACATCCCAGATCAATGCCACCGATGAGAACGGTGTGCCCATCAATTATGAGCTGGGCGTCATCTATATATGCCCGGCGTGCGGCGCCGAGTATCGGCAGCAGGACATGTGGAAGCGTCACATGAACCAGATGCATCAGTATAATACGCGCAGGGGCCTCAATTTTGTGGCCATCGACAAGCTGTACCATCGCTGTCTGGAGTGCAACAAACGGATCGCGATGCACAGCCGGGAGAATCTGCTGAAGCACAAGTTCACCCATTTGCCGTATCGTTGCACCAAGTGCTACATCTGCAAGCGCGAGTACAAGTACAGGCAGGACCTGATGGTGCATCTGCGCATGGTGCACTGTGACGAGGTAGTGGCCATGATGCGCGGCGGTGACTCCAGTGCCGGGCGCAAGACCCGGGTGCGTGAGCCGCGTGTGGAGCAGCAGCACGGTCCCTACGGTCCGGTtcatgacgatgacgacgccATCGAGGTGAAGAACGAGGTCATGGAGACGGAGAACGTGGCCAAGGCCGCGGACGAGTCCAGCTTTGGCCCAGACGATGAGCAGAGTCGCGGCTCCAGTCAGGCGgccaagaagaagcagcgTGGCAatggtgcagcagctgctccggcGGATATCTGCGAGGATTATATACACTACATGTGCCCCGACTGCGGCACCGATTGCGACACGCACGCCCAGTGGAGCCAGCACATCGAGTTCGTGCACGACTATGTCAGCCGGCGCGGGCTCAACTTTCGCTGCGTGGACATGCAGATGCAGTGCCTCGAATGCAAGGAGTTTGTCATCCCGAACACAATCAAGACGCTGCGCGCGCACAAGTTCAGCCATTTGGCGCAGCCGGAGTGGATGCGCTGTAAGCTGTGCTATCAGGGCTATACGGAGCATCACGAGCTGGTCACCCATCTGCTCAAGCAGCATCATTTGGAGACCTTGGTGCCcgagcagcaggaggagcagccCACTGCCAGTGGGGGCGACGAGTGCGAGGAGAATCAGGGCGACGATGAATCCCTGTTGCAGTGGGACGATGTGCCGCGTCGTGGTGGTCGCATTGGCAGCGACGATATGTACGAACCGCACATTGATTACTTGTGCCCGCTGTGCGGCCGGGAGTTCATCGAGAAGAAGCACTGGCGCAGCCATGTGGTCCAGGTGCACGGCATGAACGATTTGGCCAAACTCAACTTTGAGGTGATCAACGATCGCCAGTTGAAGTGCACCGAGTGCGACAAGATCATCACGAACGCCTACGGCATACAGAATGCGCAGCAGCACAGGATCACGCATCTGCCGTACAAGGCGTACGCGAGATGCCGTAAATGCCATAAATCCTATACGGATCGCAAGGGTCTGGTCAAGCACCTGGCCACCTACCATCGCGTTGGCTACGAGCCGCGCAAAGGTGGAGCGGGCGGAGGCGCAAATCCTGCCCAGAGTCTGGGCATGCCGCCGGCCAAGGCGCAGGCGCCGCGCAAACAAATTGTCACCGTGGCCAACGAAACCTATGAGATCATCTACTTGGACGAGGAGCAATCGCCGCCGagtaacaataatattaacgAAGAGAACGATTTTGGCGAGCAAATGCAGGCGGATGATGATGACTATGCCATAGGCAGCAGCCAGCTGCCAtcagcagcaccagctgccgctgcactCCAATCCCAGTCTCAATCGCAATCCCAACCCAATGCGAATCGCTATAAATGCGTCGATTGCGGCAGCCTGTTTGCCACACAGGCGGCGCTCAAGACGCACATCAGCGAGGAGCACGACTTCATGGACACGCAATACAGTGCCAAAAAGTTTGACAATGCGGAGCCCACGGAGGAGGCGACCGTGACAGCTGTGACCACGGCCAGCAGTTCTCCGGCGAGAAACAGTGCCGGCGGCTCCACCATCGAGCAGAATTATATATTCCTGTGCCCGTCGTGCGGCAAGGCCTACAAGACGCAGTTCGAGTGGCGGCGTCACATCAACGAGGAGCACAATTTCGACAAGCGGCAGTATCTGAATATGCGCCAGCTGGACAAGTATCGCTATCAGTGCACCCTCTGCAAGGACATCGTGTGCAACTCGAAGCTGAAGGGCCTGCAGGATCATCATTTTCGCCATCTGCCTTACCGGCTCTATCTGAAGTGCCTCGTCTGCGGCACCTGCTACAATCACAAGCCCAACATTGCTGCCCATCTGCGCACGCGGCACAATATCTACGAGCGCGAGTCATCCTGGCGCGAACAGCAGCCCAAGCCGCAGAACGGTTACGAGCAGGTCAAGTATAAGGATCGGGAGAGGGAAACGCAAGCCAGCTCCGCCTCGCCCACGCCGGGCGGCAGTCGCACGCTCAAGCCGCAGCCGGGCGTGCTGCCCACTCGCCCAGCGGGCCTAAACACACTGGAGGACAGCATCTCGTATCACAATGCCGTCGATCTGGACTTCATCACCTACTATTGCCCCAAGTGCAACAAGAACTTTGACTCGCACGCCTTCTGGCGCAAGCACATCGTGGAGCACCACAACTATAACAGTCGGCAGGGCCTGAATTTCCGGCAGATCGACAACCATCACTACCTGTGCCTGGAGTGCTACAAGCGGGTGACGGTCACCCACACCAAGGGCGCCATCGGGCAGCTGCAGTCGCACAAGTTCCGCCATCTGCCCTATCGCTCCTTCAAGTGCTTGACCTGCAGCGGCGAGTTCGTGCGCAAGCAGATGTTCTTCAAGCACTTGAATCGGGACACCAATCGCTGCGACAACAAGCCGTTGAGTGGTCAGGACAATGAGGAGGATGCCgtggaacagcagcagcagcagcagcagccgccgccggcggATAGAGCGACTGCCACGCCCGCGCCGCCCGAGACAGTTGACGGCGCCGCCTATCGTCTGATGTGCCCGCAGTGCGGCGATGGCTTCACCACCGGCAGCAAGGCCCTCTGGCGCGAGCACATCAATATCTACCATGGCCTGGGCAAGCGCGAAATGCTGCACATGCGCAAGCTGGGCGAGGAGCTCTATCGCTGCACCGACTgtgaggagcagctgcagacGAAGCAGGTGCGCGTCCTGCAGCAGCATCGCTTCCGCCATTTGCCCTATGCCGCCTACATACGCTGCCAGGTGTgcgagcagcagccgccggaCGGACTGGGCCATGGTGCCGCCGCTGCCGGGCTGCACAGCATGcgggagctgcagcagcatctaCGCGACGAGCATCCCCATCTGGCTGAGCAAGCGCTGCtcgaggaggaggacgaggaggaTGAGGAGAGCCAGCCGGCGGTTAACAATGAGGCGTCGGACAGCGGGCCATAtatgccgctgccgccgcacCTGTTGGACGATGACGTCGAAGACATGGAGTTTGAGGAGCAGTATCTGCTGGGCTAA
Protein Sequence: MEGMDLWTSMFSADFEEADDTHNNGNEFMGEEEDEERADEVRRKGHEPDDDAIFDFELEPIVSIAEPAEPEPAPRPTAPLAPPMATSGAPAIRPPHRQSLPASFGSTMLVGRGAAVGTAPATRPTTSQINATDENGVPINYELGVIYICPACGAEYRQQDMWKRHMNQMHQYNTRRGLNFVAIDKLYHRCLECNKRIAMHSRENLLKHKFTHLPYRCTKCYICKREYKYRQDLMVHLRMVHCDEVVAMMRGGDSSAGRKTRVREPRVEQQHGPYGPVHDDDDAIEVKNEVMETENVAKAADESSFGPDDEQSRGSSQAAKKKQRGNGAAAAPADICEDYIHYMCPDCGTDCDTHAQWSQHIEFVHDYVSRRGLNFRCVDMQMQCLECKEFVIPNTIKTLRAHKFSHLAQPEWMRCKLCYQGYTEHHELVTHLLKQHHLETLVPEQQEEQPTASGGDECEENQGDDESLLQWDDVPRRGGRIGSDDMYEPHIDYLCPLCGREFIEKKHWRSHVVQVHGMNDLAKLNFEVINDRQLKCTECDKIITNAYGIQNAQQHRITHLPYKAYARCRKCHKSYTDRKGLVKHLATYHRVGYEPRKGGAGGGANPAQSLGMPPAKAQAPRKQIVTVANETYEIIYLDEEQSPPSNNNINEENDFGEQMQADDDDYAIGSSQLPSAAPAAAALQSQSQSQSQPNANRYKCVDCGSLFATQAALKTHISEEHDFMDTQYSAKKFDNAEPTEEATVTAVTTASSSPARNSAGGSTIEQNYIFLCPSCGKAYKTQFEWRRHINEEHNFDKRQYLNMRQLDKYRYQCTLCKDIVCNSKLKGLQDHHFRHLPYRLYLKCLVCGTCYNHKPNIAAHLRTRHNIYERESSWREQQPKPQNGYEQVKYKDRERETQASSASPTPGGSRTLKPQPGVLPTRPAGLNTLEDSISYHNAVDLDFITYYCPKCNKNFDSHAFWRKHIVEHHNYNSRQGLNFRQIDNHHYLCLECYKRVTVTHTKGAIGQLQSHKFRHLPYRSFKCLTCSGEFVRKQMFFKHLNRDTNRCDNKPLSGQDNEEDAVEQQQQQQQPPPADRATATPAPPETVDGAAYRLMCPQCGDGFTTGSKALWREHINIYHGLGKREMLHMRKLGEELYRCTDCEEQLQTKQVRVLQQHRFRHLPYAAYIRCQVCEQQPPDGLGHGAAAAGLHSMRELQQHLRDEHPHLAEQALLEEEDEEDEESQPAVNNEASDSGPYMPLPPHLLDDDVEDMEFEEQYLLG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00547591;
90% Identity: -
80% Identity: -